I am using spark structured streaming to read data from Kafka and apply some udf to the dataset. The code as below :
calludf = F.udf(lambda x: function_name(x))
dfraw = spark.readStream.format('kafka') \
.option('kafka.bootstrap.servers', KAFKA_CONSUMER_IP) \
.option('subscribe', topic_name) \
.load()
df = dfraw.withColumn("value", F.col('value').cast('string')).withColumn('value', calludf(F.col('value')))
ds = df.selectExpr("CAST(value AS STRING)") \
.writeStream \
.format('console') \
.option('truncate', False) \
.start()
dsf = df.selectExpr("CAST (value AS STRING)") \
.writeStream \
.format("kafka") \
.option("kafka.bootstrap.servers", KAFKA_CONSUMER_IP) \
.option("topic", topic_name_two) \
.option("checkpointLocation", checkpoint_location) \
.start()
ds.awaitTermination()
dsf.awaitTermination()
Now the problem is that I am getting 10 dataframes as input. 2 of them failed due to some issue with the data which is understandable. The console displays rest of the 8 processed dataframes BUT only 6 of those 8 processed dataframes are written to the Kafka topic using dsf steaming query. Even though I have added checkpoint location to it but it is still not working.
PS: Do let me know if you have any suggestion regarding the code as well. I am new to spark structured streaming so maybe there is something wrong with the way I am doing it.
Related
The following code
builder = SparkSession.builder\
.appName("PythonTest11")
spark = builder.getOrCreate()
#spark.conf.set("spark.sql.debug.maxToStringFields", 10000)
# Subscribe to 1 topic
df = spark \
.readStream \
.format("kafka") \
.option("kafka.bootstrap.servers", config["kafka"]["bootstrap.servers"]) \
.option("subscribe", dataFlowTopic) \
.load()
df = df \
.selectExpr("LENGTH(value)")
#.selectExpr("CAST(value as string)") \
df.printSchema()
# Start running the query that prints the running counts to the console
query = df \
.writeStream \
.outputMode('append') \
.format('console') \
.start()
query.awaitTermination()
prints
+-------------+
|length(value)|
+-------------+
| 4095|
+-------------+
for any big message, i.e. it truncates incoming strings.
How to fix this?
It was something like console truncation or something. Not Kafka or Spark problem.
First I was running
# kafka-console-producer.sh --topic dataflow --bootstrap-server localhost:9092
and then pasting messages to it's command line and truncation was occurring.
The I ran
# kafka-console-producer.sh --topic dataflow --bootstrap-server localhost:9092 < row01.json
with the same data inside row01.json and it worked without truncation.
I am trying to write a Spark Structured Streaming job that reads from a Kafka topic and writes to separate paths (after performing some transformations) via the writeStream operation. However, when I run the following code, only the first writeStream gets executed and the second is getting ignored.
df = spark \
.readStream \
.format("kafka") \
.option("kafka.bootstrap.servers", "host1:port1,host2:port2") \
.option("subscribe", "topic1") \
.load()
write_one = df.writeStream \
.foreachBatch(lambda x, y: transform_and_write_to_zone_one(x,y)) \
.start() \
.awaitTermination()
// transform df to df2
write_two = df2.writeStream \
.foreachBatch(lambda x, y: transform_and_write_to_zone_two(x,y)) \
.start() \
.awaitTermination()
I initially thought that my issue was related to this post, however, after changing my code to the following:
df = spark \
.readStream \
.format("kafka") \
.option("kafka.bootstrap.servers", "host1:port1,host2:port2") \
.option("subscribe", "topic1") \
.load()
write_one = df.writeStream \
.foreachBatch(lambda x, y: transform_and_write_to_zone_one(x,y)) \
.start()
// transform df to df2
write_two = df2.writeStream \
.foreachBatch(lambda x, y: transform_and_write_to_zone_two(x,y)) \
.start()
write_one.awaitTermination()
write_two.awaitTermination()
I received the following error:
org.apache.spark.sql.AnalysisException: Queries with streaming sources must be executed with writeStream.start();;
I am not sure why the additional code between start() and awaitTermination() would cause the error above (but I think this is probably a separate issue that is referenced in this answer to the same post above). What is the correct way to call multiple writeStream operations within the same job? Would it be best to have both of the writes within the function that is invoked by foreachBatch or is there are a better way to achieve this?
Spark documentation says that in case you need perform writing into multiple locations you need to use foreachBatch method.
Your code should look something like:
streamingDF.writeStream.foreachBatch { (batchDF: DataFrame, batchId: Long) =>
batchDF.persist()
batchDF.write.format(...).save(...) // location 1
batchDF.write.format(...).save(...) // location 2
batchDF.unpersist()
}
Note: persist in needed in order to prevent recomputations.
You can check more: http://spark.apache.org/docs/latest/structured-streaming-programming-guide.html#using-foreach-and-foreachbatch
You just don't call awaiTermination() for each of your stream queries, but just one through spark session, eg:
spark.streams.awaitAnyTermination()
at the code
if not df.head(1).isEmpty:
I got exception,
Exception has occurred: pyspark.sql.utils.AnalysisException 'Queries with streaming sources must be executed with writeStream.start();;\nkafka'
I do not know how to use if in streaming data.
when I use jupyter, to execute each line, the code is well, and I can got my result. but use .py it's not good.
my perpose is this: I want use streaming to get data from kafka every one second, then I transform every batch steaming data(one batch means the data one second I get) to pandas dataframe, and then I use pandas function to do something to the data, finally I send the result to other kafka topic.
Please help me, and forgive my pool english, Thanks a lot.
sc = SparkContext("local[2]", "OdometryConsumer")
spark = SparkSession(sparkContext=sc) \
.builder \
.appName("StructuredNetworkWordCount") \
.getOrCreate()
# Enable Arrow-based columnar data transfers
spark.conf.set("spark.sql.execution.arrow.enabled", "true")
df = spark \
.readStream \
.format("kafka") \
.option("kafka.bootstrap.servers", "localhost:9092") \
.option("subscribe", "data") \
.load()
ds = df.selectExpr("CAST(key AS STRING)", "CAST(value AS STRING)")
print(type(ds))
if not df.head(1).isEmpty:
alertQuery = ds \
.writeStream \
.queryName("qalerts")\
.format("memory")\
.start()
alerts = spark.sql("select * from qalerts")
pdAlerts = alerts.toPandas()
a = pdAlerts['value'].tolist()
d = []
for i in a:
x = json.loads(i)
d.append(x)
df = pd.DataFrame(d)
print(df)
ds = df['jobID'].unique().tolist()
dics = {}
for source in ds:
ids = df.loc[df['jobID'] == source, 'id'].tolist()
dics[source]=ids
print(dics)
query = ds \
.writeStream \
.queryName("tableName") \
.format("console") \
.start()
query.awaitTermination()
Remove if not df.head(1).isEmpty: and you should be fine.
The reason for the exception is simple, i.e. a streaming query is a structured query that never ends and is continually executed. It is simply not possible to look at a single element since there is no "single element", but (possibly) thousands of elements and it'd be hard to tell when exactly you'd like to look under the covers and see just a single element.
I am able to read a stream from a Kafka topic and write the (transformed) data back to another Kafka topic in two different steps in PySpark. The code to do that is as follows:
# Define Stream:
df = spark \
.readStream \
.format("kafka") \
.option("kafka.bootstrap.servers", "localhost:9092") \
.option("subscribe", "instream") \
.load()
# Transform
matchdata = df.select(from_json(F.col("value").cast("string"),schema).alias("value"))\
.select(F.col('value').cast("string"))
# Stream the data, from a Kafka topic to a Spark in-memory table
query = matchdata \
.writeStream \
.format("memory") \
.queryName("PositionTable") \
.outputMode("append") \
.start()
query.awaitTermination(5)
# Create a new dataframe after stream completes:
tmp_df=spark.sql("select * from PositionTable")
# Write data to a different Kafka topic
tmp_df \
.write \
.format("kafka") \
.option("kafka.bootstrap.servers", "localhost:9092") \
.option("topic", "outstream") \
.save()
The code above works as expected: the data in Kafka topic "instream" is read in PySpark, and then PySpark can write out data to Kafka topic "outstream".
However, I would like to read the stream in and write the transformed data back out immediately (the stream will be unbounded and we would like insights immediately as the data rolls in). Following the documentation, I replaced the query above with the following:
query = matchdata \
.writeStream \
.format("kafka") \
.option("kafka.bootstrap.servers", "localhost:9092") \
.option("topic", "outstream") \
.option("checkpointLocation", "/path/to/HDFS/dir") \
.start()
This does not appear to work.
There is no error message, so I do not know what is wrong. I've also tried windowing and aggregating within windows, but that also does not work. Any advice will be appreciated!
Ok, I found the problem. The main reason was that the subdirectory "path/to/HDFS/dir" has to exist. After creating that directory the code ran as expected. It would have been nice if an error message stated something along those lines.
I'm consuming from Kafka and writing to parquet in EMRFS. Below code works in spark-shell:
val filesink_query = outputdf.writeStream
.partitionBy(<some column>)
.format("parquet")
.option("path", <some path in EMRFS>)
.option("checkpointLocation", "/tmp/ingestcheckpoint")
.trigger(Trigger.ProcessingTime(10.seconds))
.outputMode(OutputMode.Append)
.start
SBT is able to package the code without errors. When the .jar is sent to spark-submit, the job is accepted and stays in running state forever without writing data to HDFS.
There is no ERROR in the .inprogress log
Some posts suggest that a large watermark duration can cause it, but I have not set a custom watermark duration.
I can write to parquet using Pyspark, I put you my code in case that will be useful:
stream = self.spark.readStream \
.format("kafka") \
.option("kafka.bootstrap.servers", self.kafka_bootstrap_servers) \
.option("subscribe", self.topic) \
.option("startingOffsets", self.startingOffsets) \
.option("max.poll.records", self.max_poll_records) \
.option("auto.commit.interval.ms", self.auto_commit_interval_ms) \
.option("session.timeout.ms", self.session_timeout_ms) \
.option("key.deserializer", self.key_deserializer) \
.option("value.deserializer", self.value_deserializer) \
.load()
self.query = stream \
.select(col("value")) \
.select((self.proto_function("value")).alias("value_udf")) \
.select(*columns,
date_format(column_time, "yyyy").alias("date").alias("year"),
date_format(column_time, "MM").alias("date").alias("month"),
date_format(column_time, "dd").alias("date").alias("day"),
date_format(column_time, "HH").alias("date").alias("hour"))
query = self.query \
.writeStream \
.format("parquet") \
.option("checkpointLocation", self.path) \
.partitionBy("year", "month", "day", "hour") \
.option("path", self.path) \
.start()
Also, you need to run the code in that way: spark-submit --packages org.apache.spark:spark-sql-kafka-0-10_2.11:2.3.0 <code>