I'm using cassandra 3.11 + spark 2.12 (Version 3.1.1). I ran a query and this error appear in the spark. I don't have any idea about it.
Query:
SELECT data_inicio, data_fim, dados_antigos FROM historico ;
Stack Trace:
2022-02-24 09:38:50.175 ERROR 13576 --- [nio-8080-exec-1]
o.s.b.w.servlet.support.ErrorPageFilter : Forwarding to error page
from request [/opeGraficos] due to exception [Job aborted due to stage
failure: Task 5 in stage 0.0 failed 1 times, most recent failure: Lost
task 5.0 in stage 0.0 (TID 5) (server.genesis.local executor driver):
java.lang.ArithmeticException: integer overflow at
java.lang.Math.toIntExact(Math.java:1011) at
org.apache.spark.sql.catalyst.util.DateTimeUtils$.fromJavaDate(DateTimeUtils.scala:90)
at
org.apache.spark.sql.catalyst.CatalystTypeConverters$DateConverter$.toCatalystImpl(CatalystTypeConverters.scala:306)
at
org.apache.spark.sql.catalyst.CatalystTypeConverters$DateConverter$.toCatalystImpl(CatalystTypeConverters.scala:305)
at
org.apache.spark.sql.catalyst.CatalystTypeConverters$CatalystTypeConverter.toCatalyst(CatalystTypeConverters.scala:107)
at
org.apache.spark.sql.catalyst.CatalystTypeConverters$StructConverter.toCatalystImpl(CatalystTypeConverters.scala:252)
at
org.apache.spark.sql.catalyst.CatalystTypeConverters$StructConverter.toCatalystImpl(CatalystTypeConverters.scala:242)
at
org.apache.spark.sql.catalyst.CatalystTypeConverters$CatalystTypeConverter.toCatalyst(CatalystTypeConverters.scala:107)
at
org.apache.spark.sql.catalyst.CatalystTypeConverters$.$anonfun$createToCatalystConverter$2(CatalystTypeConverters.scala:426)
at
com.datastax.spark.connector.datasource.UnsafeRowReader.read(UnsafeRowReaderFactory.scala:34)
at
com.datastax.spark.connector.datasource.UnsafeRowReader.read(UnsafeRowReaderFactory.scala:21)
at
com.datastax.spark.connector.datasource.CassandraPartitionReaderBase.$anonfun$getIterator$2(CassandraScanPartitionReaderFactory.scala:110)
at scala.collection.Iterator$$anon$10.next(Iterator.scala:461) at
scala.collection.Iterator$$anon$11.next(Iterator.scala:496) at
com.datastax.spark.connector.datasource.CassandraPartitionReaderBase.next(CassandraScanPartitionReaderFactory.scala:66)
at
org.apache.spark.sql.execution.datasources.v2.PartitionIterator.hasNext(DataSourceRDD.scala:79)
at
org.apache.spark.sql.execution.datasources.v2.MetricsIterator.hasNext(DataSourceRDD.scala:112)
at
org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
at scala.collection.Iterator$$anon$10.hasNext(Iterator.scala:460) at
org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.processNext(Unknown
Source) at
org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at
org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:755)
at
org.apache.spark.sql.execution.SparkPlan.$anonfun$getByteArrayRdd$1(SparkPlan.scala:345)
at
org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:898)
at
org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:898)
at
org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:373)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:337) at
org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90) at
org.apache.spark.scheduler.Task.run(Task.scala:131) at
org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:497)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1439)
at
org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:500)
at
java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at
java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748) Driver stacktrace:]
Schema:
CREATE TABLE IF NOT EXISTS "keyspace"."historico" (
"id_historico" uuid,
"data_inicio" date,
"data_fim" date,
"dados_antigos" varchar,
PRIMARY KEY("id_historico")
);
Related
I am trying to load a parquet file in a MS Synapse Analytics Notebook. When the following error occurs.
df1 = spark.read.load(abfss_path+'file_name.parquet', format='parquet')
Py4JJavaError: An error occurred while calling o1216.load.
: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 0.0 failed 4 times, most recent failure: Lost task 0.3 in stage 0.0 (TID 3) (vm-5fb81713 executor 1): org.apache.spark.SparkException: Exception thrown in awaitResult:
at org.apache.spark.util.ThreadUtils$.awaitResult(ThreadUtils.scala:301)
at org.apache.spark.util.ThreadUtils$.parmap(ThreadUtils.scala:375)
at org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat$.readParquetFootersInParallel(ParquetFileFormat.scala:545)
at org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat$.$anonfun$mergeSchemasInParallel$1(ParquetFileFormat.scala:591)
at org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat$.$anonfun$mergeSchemasInParallel$1$adapted(ParquetFileFormat.scala:585)
at org.apache.spark.sql.execution.datasources.SchemaMergeUtils$.$anonfun$mergeSchemasInParallel$2(SchemaMergeUtils.scala:76)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitions$2(RDD.scala:870)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitions$2$adapted(RDD.scala:870)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:57)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:374)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:338)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:131)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:506)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1491)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:509)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:750)
Caused by: java.io.EOFException
at org.apache.parquet.bytes.BytesUtils.readIntLittleEndian(BytesUtils.java:88)
at org.apache.parquet.hadoop.ParquetFileReader.readFooter(ParquetFileReader.java:547)
at org.apache.parquet.hadoop.ParquetFileReader.readFooter(ParquetFileReader.java:527)
at org.apache.parquet.hadoop.ParquetFileReader.readFooter(ParquetFileReader.java:521)
at org.apache.parquet.hadoop.ParquetFileReader.readFooter(ParquetFileReader.java:497)
at org.apache.spark.sql.execution.datasources.parquet.ParquetMetadataCacheReader$.getFooter(ParquetMetadataCacheReader.scala:102)
at org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat$.$anonfun$readParquetFootersInParallel$1(ParquetFileFormat.scala:552)
at org.apache.spark.util.ThreadUtils$.$anonfun$parmap$2(ThreadUtils.scala:372)
at scala.concurrent.Future$.$anonfun$apply$1(Future.scala:659)
at scala.util.Success.$anonfun$map$1(Try.scala:255)
at scala.util.Success.map(Try.scala:213)
at scala.concurrent.Future.$anonfun$map$1(Future.scala:292)
at scala.concurrent.impl.Promise.liftedTree1$1(Promise.scala:33)
at scala.concurrent.impl.Promise.$anonfun$transform$1(Promise.scala:33)
at scala.concurrent.impl.CallbackRunnable.run(Promise.scala:64)
at java.util.concurrent.ForkJoinTask$RunnableExecuteAction.exec(ForkJoinTask.java:1402)
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:289)
at java.util.concurrent.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1056)
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1692)
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:175)
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.failJobAndIndependentStages(DAGScheduler.scala:2464)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2(DAGScheduler.scala:2413)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2$adapted(DAGScheduler.scala:2412)
at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:2412)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1(DAGScheduler.scala:1168)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1$adapted(DAGScheduler.scala:1168)
at scala.Option.foreach(Option.scala:407)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:1168)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2652)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2594)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2583)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:944)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2318)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2339)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2358)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2383)
at org.apache.spark.rdd.RDD.$anonfun$collect$1(RDD.scala:1037)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
at org.apache.spark.rdd.RDD.withScope(RDD.scala:415)
at org.apache.spark.rdd.RDD.collect(RDD.scala:1036)
at org.apache.spark.sql.execution.datasources.SchemaMergeUtils$.mergeSchemasInParallel(SchemaMergeUtils.scala:70)
at org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat$.mergeSchemasInParallel(ParquetFileFormat.scala:595)
at org.apache.spark.sql.execution.datasources.parquet.ParquetUtils$.inferSchema(ParquetUtils.scala:107)
at org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat.inferSchema(ParquetFileFormat.scala:227)
at org.apache.spark.sql.execution.datasources.DataSource.$anonfun$getOrInferFileFormatSchema$11(DataSource.scala:210)
at scala.Option.orElse(Option.scala:447)
at org.apache.spark.sql.execution.datasources.DataSource.getOrInferFileFormatSchema(DataSource.scala:207)
at org.apache.spark.sql.execution.datasources.DataSource.resolveRelation(DataSource.scala:411)
at org.apache.spark.sql.DataFrameReader.loadV1Source(DataFrameReader.scala:281)
at org.apache.spark.sql.DataFrameReader.$anonfun$load$3(DataFrameReader.scala:253)
at scala.Option.getOrElse(Option.scala:189)
at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:253)
at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:190)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:282)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:238)
at java.lang.Thread.run(Thread.java:750)
Caused by: org.apache.spark.SparkException: Exception thrown in awaitResult:
at org.apache.spark.util.ThreadUtils$.awaitResult(ThreadUtils.scala:301)
at org.apache.spark.util.ThreadUtils$.parmap(ThreadUtils.scala:375)
at org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat$.readParquetFootersInParallel(ParquetFileFormat.scala:545)
at org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat$.$anonfun$mergeSchemasInParallel$1(ParquetFileFormat.scala:591)
at org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat$.$anonfun$mergeSchemasInParallel$1$adapted(ParquetFileFormat.scala:585)
at org.apache.spark.sql.execution.datasources.SchemaMergeUtils$.$anonfun$mergeSchemasInParallel$2(SchemaMergeUtils.scala:76)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitions$2(RDD.scala:870)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitions$2$adapted(RDD.scala:870)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:57)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:374)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:338)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:131)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:506)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1491)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:509)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Caused by: java.io.EOFException
at org.apache.parquet.bytes.BytesUtils.readIntLittleEndian(BytesUtils.java:88)
at org.apache.parquet.hadoop.ParquetFileReader.readFooter(ParquetFileReader.java:547)
at org.apache.parquet.hadoop.ParquetFileReader.readFooter(ParquetFileReader.java:527)
at org.apache.parquet.hadoop.ParquetFileReader.readFooter(ParquetFileReader.java:521)
at org.apache.parquet.hadoop.ParquetFileReader.readFooter(ParquetFileReader.java:497)
at org.apache.spark.sql.execution.datasources.parquet.ParquetMetadataCacheReader$.getFooter(ParquetMetadataCacheReader.scala:102)
at org.apache.spark.sql.execution.datasources.parquet.ParquetFileFormat$.$anonfun$readParquetFootersInParallel$1(ParquetFileFormat.scala:552)
at org.apache.spark.util.ThreadUtils$.$anonfun$parmap$2(ThreadUtils.scala:372)
at scala.concurrent.Future$.$anonfun$apply$1(Future.scala:659)
at scala.util.Success.$anonfun$map$1(Try.scala:255)
at scala.util.Success.map(Try.scala:213)
at scala.concurrent.Future.$anonfun$map$1(Future.scala:292)
at scala.concurrent.impl.Promise.liftedTree1$1(Promise.scala:33)
at scala.concurrent.impl.Promise.$anonfun$transform$1(Promise.scala:33)
at scala.concurrent.impl.CallbackRunnable.run(Promise.scala:64)
at java.util.concurrent.ForkJoinTask$RunnableExecuteAction.exec(ForkJoinTask.java:1402)
at java.util.concurrent.ForkJoinTask.doExec(ForkJoinTask.java:289)
at java.util.concurrent.ForkJoinPool$WorkQueue.runTask(ForkJoinPool.java:1056)
at java.util.concurrent.ForkJoinPool.runWorker(ForkJoinPool.java:1692)
at java.util.concurrent.ForkJoinWorkerThread.run(ForkJoinWorkerThread.java:175)
I suspected it might have something to do with the fact I had decimal Numbers in the file, but I disabled the vectorizedReader and it still occured.
Somehow this exception occurs only sometimes and other times the Notebook run without failure.
The Notebook runs in a Synapse Pipeline and the file which I am trying to read is created in another Notebook previous to this one. Do you think it might be a problem with the Synapse pipeline running the Notebook before the file is fully written and if so, is there a solution besides implementing a wait activity?
As per above error .Please check once whether Storage blob contributor role assigned or not and then, follow below code:
Code:
%%pyspark
df = spark.read.load('abfss://<container_name>#<storage_account_name>.dfs.core.windows.net/<file_Name>.parquet', format='parquet')
display(df.limit(10))
from pyspark import SparkConf,SparkContext
conf=SparkConf().setMaster("local").setAppName("my App")
sc=SparkContext(conf=conf)
lines = sc.textFile("C:/Users/user/Downloads/learning-spark-master/learning-spark-master/README.md")
pythonLines = lines.filter(lambda line: "Python" in line)
pythonLines
pythonLines.first()
I am new to pyspark. I was trying to execute above code and I am getting following error after executing pythonLines(). Any help would be appreciated.
Py4JJavaError: An error occurred while calling z:org.apache.spark.api.python.PythonRDD.runJob.
: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 3.0 failed 1 times, most recent failure: Lost task 0.0 in stage 3.0 (TID 3) (LAPTOP-GAN836TE.fios-router.home executor driver): org.apache.spark.SparkException: Python worker failed to connect back.
at org.apache.spark.api.python.PythonWorkerFactory.createSimpleWorker(PythonWorkerFactory.scala:182)
at org.apache.spark.api.python.PythonWorkerFactory.create(PythonWorkerFactory.scala:107)
at org.apache.spark.SparkEnv.createPythonWorker(SparkEnv.scala:119)
at org.apache.spark.api.python.BasePythonRunner.compute(PythonRunner.scala:145)
at org.apache.spark.api.python.PythonRDD.compute(PythonRDD.scala:65)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:373)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:337)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:131)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:497)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1439)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:500)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.net.SocketTimeoutException: Accept timed out
at java.net.DualStackPlainSocketImpl.waitForNewConnection(Native Method)
at java.net.DualStackPlainSocketImpl.socketAccept(DualStackPlainSocketImpl.java:131)
at java.net.AbstractPlainSocketImpl.accept(AbstractPlainSocketImpl.java:535)
at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:189)
at java.net.ServerSocket.implAccept(ServerSocket.java:545)
at java.net.ServerSocket.accept(ServerSocket.java:513)
at org.apache.spark.api.python.PythonWorkerFactory.createSimpleWorker(PythonWorkerFactory.scala:174)
... 14 more
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.failJobAndIndependentStages(DAGScheduler.scala:2253)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2(DAGScheduler.scala:2202)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2$adapted(DAGScheduler.scala:2201)
at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:2201)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1(DAGScheduler.scala:1078)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1$adapted(DAGScheduler.scala:1078)
at scala.Option.foreach(Option.scala:407)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:1078)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2440)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2382)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2371)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:868)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2202)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2223)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2242)
at org.apache.spark.api.python.PythonRDD$.runJob(PythonRDD.scala:166)
at org.apache.spark.api.python.PythonRDD.runJob(PythonRDD.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:282)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:238)
at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.spark.SparkException: Python worker failed to connect back.
at org.apache.spark.api.python.PythonWorkerFactory.createSimpleWorker(PythonWorkerFactory.scala:182)
at org.apache.spark.api.python.PythonWorkerFactory.create(PythonWorkerFactory.scala:107)
at org.apache.spark.SparkEnv.createPythonWorker(SparkEnv.scala:119)
at org.apache.spark.api.python.BasePythonRunner.compute(PythonRunner.scala:145)
at org.apache.spark.api.python.PythonRDD.compute(PythonRDD.scala:65)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:373)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:337)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:131)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:497)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1439)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:500)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Caused by: java.net.SocketTimeoutException: Accept timed out
at java.net.DualStackPlainSocketImpl.waitForNewConnection(Native Method)
at java.net.DualStackPlainSocketImpl.socketAccept(DualStackPlainSocketImpl.java:131)
at java.net.AbstractPlainSocketImpl.accept(AbstractPlainSocketImpl.java:535)
at java.net.PlainSocketImpl.accept(PlainSocketImpl.java:189)
at java.net.ServerSocket.implAccept(ServerSocket.java:545)
at java.net.ServerSocket.accept(ServerSocket.java:513)
at org.apache.spark.api.python.PythonWorkerFactory.createSimpleWorker(PythonWorkerFactory.scala:174)
... 14 more
Based on the code , am not seeing anything wrong . Still you can analysis this issue based on the following data related .
Make sure 4th line lines rdd has the data based on the collect().
make your after filter line #5 , you are not getting empty rdd by using of isEmpty(). ref : link
Same code I have ran for your reference as sample.
I ran into the same error in Chapter 7 in the "Data Science on GCP" book by author Valliappa Lakshmanan.
The author points this out in one of the logistic_regression.ipynb cells by writing "if this is empty, change the shard you are using", but it's not clear that above error could be an indication of that.
Following their tip, simply change
inputs = 'gs://{}/flights/tzcorr/all_flights-00000-*'.format(BUCKET)
to something like (note the 1 instead of the 0 to select a different shard)
inputs = 'gs://{}/flights/tzcorr/all_flights-00001-*'.format(BUCKET)
You'd have to make an equivalent change further down to not test the model on the same data as you trained it on.
Have given Public access to the container as well as storage account has full access.
Using scope and key to read the data.
I can able to read the data but not able to write. Facing below error.
Py4JJavaError: An error occurred while calling o4764.save.
: org.apache.spark.SparkException: Job aborted.
at org.apache.spark.sql.execution.datasources.FileFormatWriter$.write(FileFormatWriter.scala:198)
at org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelationCommand.run(InsertIntoHadoopFsRelationCommand.scala:201)
at org.apache.spark.sql.execution.command.DataWritingCommandExec.sideEffectResult$lzycompute(commands.scala:110)
at org.apache.spark.sql.execution.command.DataWritingCommandExec.sideEffectResult(commands.scala:108)
at org.apache.spark.sql.execution.command.DataWritingCommandExec.doExecute(commands.scala:128)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:146)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$1.apply(SparkPlan.scala:134)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$executeQuery$5.apply(SparkPlan.scala:187)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
at org.apache.spark.sql.execution.SparkPlan.executeQuery(SparkPlan.scala:183)
at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:134)
at org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:116)
at org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:116)
at org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:711)
at org.apache.spark.sql.DataFrameWriter$$anonfun$runCommand$1.apply(DataFrameWriter.scala:711)
at org.apache.spark.sql.execution.SQLExecution$$anonfun$withCustomExecutionEnv$1.apply(SQLExecution.scala:111)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:241)
at org.apache.spark.sql.execution.SQLExecution$.withCustomExecutionEnv(SQLExecution.scala:97)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:171)
at org.apache.spark.sql.DataFrameWriter.runCommand(DataFrameWriter.scala:711)
at org.apache.spark.sql.DataFrameWriter.saveToV1Source(DataFrameWriter.scala:307)
at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:293)
at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:235)
at sun.reflect.GeneratedMethodAccessor526.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:380)
at py4j.Gateway.invoke(Gateway.java:295)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:251)
at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 129.0 failed 4 times, most recent failure: Lost task 0.3 in stage 129.0 (TID 1872, localhost, executor driver): shaded.databricks.org.apache.hadoop.fs.azure.AzureException: java.util.NoSuchElementException: An error occurred while enumerating the result, check the original exception for details.
at shaded.databricks.org.apache.hadoop.fs.azure.AzureNativeFileSystemStore.retrieveMetadata(AzureNativeFileSystemStore.java:2109)
at shaded.databricks.org.apache.hadoop.fs.azure.NativeAzureFileSystem.getAncestor(NativeAzureFileSystem.java:2665)
at shaded.databricks.org.apache.hadoop.fs.azure.NativeAzureFileSystem.create(NativeAzureFileSystem.java:1743)
at shaded.databricks.org.apache.hadoop.fs.azure.NativeAzureFileSystem.create(NativeAzureFileSystem.java:1593)
at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:911)
at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:892)
at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:789)
at com.databricks.sql.transaction.directory.DirectoryAtomicCommitProtocol.newTaskTempFileAbsPath(DirectoryAtomicCommitProtocol.scala:121)
at com.databricks.sql.transaction.directory.DirectoryAtomicCommitProtocol.newTaskTempFile(DirectoryAtomicCommitProtocol.scala:102)
at org.apache.spark.sql.execution.datasources.SingleDirectoryDataWriter.newOutputWriter(FileFormatDataWriter.scala:115)
at org.apache.spark.sql.execution.datasources.SingleDirectoryDataWriter.<init>(FileFormatDataWriter.scala:108)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$.org$apache$spark$sql$execution$datasources$FileFormatWriter$$executeTask(FileFormatWriter.scala:236)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$write$1.apply(FileFormatWriter.scala:170)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$write$1.apply(FileFormatWriter.scala:169)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.doRunTask(Task.scala:139)
at org.apache.spark.scheduler.Task.run(Task.scala:112)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$13.apply(Executor.scala:497)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1526)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:503)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.util.NoSuchElementException: An error occurred while enumerating the result, check the original exception for details.
at com.microsoft.azure.storage.core.LazySegmentedIterator.hasNext(LazySegmentedIterator.java:113)
at shaded.databricks.org.apache.hadoop.fs.azure.StorageInterfaceImpl$WrappingIterator.hasNext(StorageInterfaceImpl.java:133)
at shaded.databricks.org.apache.hadoop.fs.azure.AzureNativeFileSystemStore.retrieveMetadata(AzureNativeFileSystemStore.java:2087)
... 22 more
Caused by: com.microsoft.azure.storage.StorageException: The specified resource does not exist.
at com.microsoft.azure.storage.StorageException.translateException(StorageException.java:89)
at com.microsoft.azure.storage.core.StorageRequest.materializeException(StorageRequest.java:305)
at com.microsoft.azure.storage.core.ExecutionEngine.executeWithRetry(ExecutionEngine.java:178)
at com.microsoft.azure.storage.core.LazySegmentedIterator.hasNext(LazySegmentedIterator.java:109)
... 24 more
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:2355)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:2343)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:2342)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:2342)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:1096)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:1096)
at scala.Option.foreach(Option.scala:257)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:1096)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2574)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2522)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2510)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:893)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2243)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$.write(FileFormatWriter.scala:167)
... 32 more
Caused by: shaded.databricks.org.apache.hadoop.fs.azure.AzureException: java.util.NoSuchElementException: An error occurred while enumerating the result, check the original exception for details.
at shaded.databricks.org.apache.hadoop.fs.azure.AzureNativeFileSystemStore.retrieveMetadata(AzureNativeFileSystemStore.java:2109)
at shaded.databricks.org.apache.hadoop.fs.azure.NativeAzureFileSystem.getAncestor(NativeAzureFileSystem.java:2665)
at shaded.databricks.org.apache.hadoop.fs.azure.NativeAzureFileSystem.create(NativeAzureFileSystem.java:1743)
at shaded.databricks.org.apache.hadoop.fs.azure.NativeAzureFileSystem.create(NativeAzureFileSystem.java:1593)
at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:911)
at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:892)
at org.apache.hadoop.fs.FileSystem.create(FileSystem.java:789)
at com.databricks.sql.transaction.directory.DirectoryAtomicCommitProtocol.newTaskTempFileAbsPath(DirectoryAtomicCommitProtocol.scala:121)
at com.databricks.sql.transaction.directory.DirectoryAtomicCommitProtocol.newTaskTempFile(DirectoryAtomicCommitProtocol.scala:102)
at org.apache.spark.sql.execution.datasources.SingleDirectoryDataWriter.newOutputWriter(FileFormatDataWriter.scala:115)
at org.apache.spark.sql.execution.datasources.SingleDirectoryDataWriter.<init>(FileFormatDataWriter.scala:108)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$.org$apache$spark$sql$execution$datasources$FileFormatWriter$$executeTask(FileFormatWriter.scala:236)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$write$1.apply(FileFormatWriter.scala:170)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$write$1.apply(FileFormatWriter.scala:169)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.doRunTask(Task.scala:139)
at org.apache.spark.scheduler.Task.run(Task.scala:112)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$13.apply(Executor.scala:497)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1526)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:503)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Caused by: java.util.NoSuchElementException: An error occurred while enumerating the result, check the original exception for details.
at com.microsoft.azure.storage.core.LazySegmentedIterator.hasNext(LazySegmentedIterator.java:113)
at shaded.databricks.org.apache.hadoop.fs.azure.StorageInterfaceImpl$WrappingIterator.hasNext(StorageInterfaceImpl.java:133)
at shaded.databricks.org.apache.hadoop.fs.azure.AzureNativeFileSystemStore.retrieveMetadata(AzureNativeFileSystemStore.java:2087)
... 22 more
Caused by: com.microsoft.azure.storage.StorageException: The specified resource does not exist.
at com.microsoft.azure.storage.StorageException.translateException(StorageException.java:89)
at com.microsoft.azure.storage.core.StorageRequest.materializeException(StorageRequest.java:305)
at com.microsoft.azure.storage.core.ExecutionEngine.executeWithRetry(ExecutionEngine.java:178)
at com.microsoft.azure.storage.core.LazySegmentedIterator.hasNext(LazySegmentedIterator.java:109)
... 24 more
I am doing DataFrames and DataSets exercises with spark in Jupyter and I have run into a problem. When carrying out a filter for those houses with a price higher than $ 120,000 I find an error that only gives me when I run it through Jupyter with Spylon-Kernel (version 0.4.1) and it is that I don't lets apply the filter function receiving a house as a parameter while if I do it from the spark-shell terminal it works and I don't understand why. Attached images and code:
Code
case class House (id: Int, city: String, price: Int)
val houseDF = Seq(House(1,"Paris", 120000),
House(2,"Paris", 150000), House(3,"Berlin", 138000),
House(4,"Berlin", 160000), House(5,"Madrid", 110000),
House(6,"Madrid", 125000), House(7,"Paris", 140000),
House(8,"Madrid", 150000), House(9,"Berlin", 125000),
House(10,"Berlin", 132000)).toDF
val houseDS = houseDF.as[House]
houseDS.filter( houseDS("price") > 120000).show(5) // This work :)
houseDS.filter(house => house.price > 120000).show(5) // This not work :(
Error:
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 0.0 failed 1 times, most recent failure: Lost task 0.0 in stage 0.0 (TID 0, 192.168.1.20, executor driver): java.lang.ClassCastException: $iw cannot be cast to $iw
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:729)
at org.apache.spark.sql.execution.SparkPlan.$anonfun$getByteArrayRdd$1(SparkPlan.scala:340)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:872)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:872)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:349)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:313)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:127)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:446)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1377)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:449)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.failJobAndIndependentStages(DAGScheduler.scala:2059)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2(DAGScheduler.scala:2008)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2$adapted(DAGScheduler.scala:2007)
at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:2007)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1(DAGScheduler.scala:973)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1$adapted(DAGScheduler.scala:973)
at scala.Option.foreach(Option.scala:407)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:973)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2239)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2188)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2177)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:775)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2099)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2120)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2139)
at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:467)
at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:420)
at org.apache.spark.sql.execution.CollectLimitExec.executeCollect(limit.scala:47)
at org.apache.spark.sql.Dataset.collectFromPlan(Dataset.scala:3627)
at org.apache.spark.sql.Dataset.$anonfun$head$1(Dataset.scala:2697)
at org.apache.spark.sql.Dataset.$anonfun$withAction$1(Dataset.scala:3618)
at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$5(SQLExecution.scala:100)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:160)
at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$1(SQLExecution.scala:87)
at org.apache.spark.sql.SparkSession.withActive(SparkSession.scala:764)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:64)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3616)
at org.apache.spark.sql.Dataset.head(Dataset.scala:2697)
at org.apache.spark.sql.Dataset.take(Dataset.scala:2904)
at org.apache.spark.sql.Dataset.getRows(Dataset.scala:300)
at org.apache.spark.sql.Dataset.showString(Dataset.scala:337)
at org.apache.spark.sql.Dataset.show(Dataset.scala:824)
at org.apache.spark.sql.Dataset.show(Dataset.scala:783)
... 37 elided
Caused by: java.lang.ClassCastException: $iw cannot be cast to $iw
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:729)
at org.apache.spark.sql.execution.SparkPlan.$anonfun$getByteArrayRdd$1(SparkPlan.scala:340)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:872)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:872)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:349)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:313)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:127)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:446)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1377)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:449)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Screenshots
I don't know if it will be something from Jupyter, something from the Kernel (Spylon) or no idea.
Thank you very much to all!!
I've seen similar problems with regards to case classes that are defined directly in a cell.
try replacing the cell that defines House with:
object X {
case class House (id: Int, city: String, price: Int)
}
import X._
Alternatively, if you define House in a separate jar, and add that jar to the CLASSPATH, I think it will also work
I am trying to read parquet files from S3 with Spark. I tried both using Hive table or directly reading from S3.
Here is the stacktrace:
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 83.0 failed 4 times, most recent failure: Lost task 0.3 in stage 83.0 (TID 17419, ip-10-23-0-40.ec2.internal, executor 82): org.apache.spark.sql.execution.QueryExecutionException: Encounter error while reading parquet files. One possible cause: Parquet column cannot be converted in the corresponding files. Details:
at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.nextIterator(FileScanRDD.scala:226)
at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.hasNext(FileScanRDD.scala:130)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:291)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:283)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:123)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: org.apache.parquet.io.ParquetDecodingException: Can not read value at 1 in block 0 in file s3://path_to_my_file.snappy.parquet
at org.apache.parquet.hadoop.InternalParquetRecordReader.nextKeyValue(InternalParquetRecordReader.java:251)
at org.apache.parquet.hadoop.ParquetRecordReader.nextKeyValue(ParquetRecordReader.java:207)
at org.apache.spark.sql.execution.datasources.RecordReaderIterator.hasNext(RecordReaderIterator.scala:39)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.hasNext(FileScanRDD.scala:130)
at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.nextIterator(FileScanRDD.scala:214)
... 21 more
Caused by: java.lang.ClassCastException: [B cannot be cast to java.lang.Long
at scala.runtime.BoxesRunTime.unboxToLong(BoxesRunTime.java:105)
at org.apache.spark.sql.catalyst.expressions.MutableLong.update(SpecificInternalRow.scala:148)
at org.apache.spark.sql.catalyst.expressions.SpecificInternalRow.update(SpecificInternalRow.scala:228)
at org.apache.spark.sql.execution.datasources.parquet.ParquetRowConverter$RowUpdater.set(ParquetRowConverter.scala:164)
at org.apache.spark.sql.execution.datasources.parquet.ParquetPrimitiveConverter.addBinary(ParquetRowConverter.scala:90)
at org.apache.parquet.column.impl.ColumnReaderImpl$2$6.writeValue(ColumnReaderImpl.java:317)
at org.apache.parquet.column.impl.ColumnReaderImpl.writeCurrentValueToConverter(ColumnReaderImpl.java:367)
at org.apache.parquet.io.RecordReaderImplementation.read(RecordReaderImplementation.java:406)
at org.apache.parquet.hadoop.InternalParquetRecordReader.nextKeyValue(InternalParquetRecordReader.java:226)
... 26 more
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:2041)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:2029)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:2028)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:2028)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:966)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:966)
at scala.Option.foreach(Option.scala:257)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:966)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2262)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2211)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2200)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:777)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2061)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2082)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2101)
at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:401)
at org.apache.spark.sql.execution.CollectLimitExec.executeCollect(limit.scala:38)
at org.apache.spark.sql.Dataset.org$apache$spark$sql$Dataset$$collectFromPlan(Dataset.scala:3389)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2550)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2550)
at org.apache.spark.sql.Dataset$$anonfun$52.apply(Dataset.scala:3370)
at org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:78)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:125)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:73)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3369)
at org.apache.spark.sql.Dataset.head(Dataset.scala:2550)
at org.apache.spark.sql.Dataset.take(Dataset.scala:2764)
at org.apache.spark.sql.Dataset.getRows(Dataset.scala:254)
at org.apache.spark.sql.Dataset.showString(Dataset.scala:291)
at org.apache.spark.sql.Dataset.show(Dataset.scala:751)
at org.apache.spark.sql.Dataset.show(Dataset.scala:710)
at org.apache.spark.sql.Dataset.show(Dataset.scala:719)
... 49 elided
Caused by: org.apache.spark.sql.execution.QueryExecutionException: Encounter error while reading parquet files. One possible cause: Parquet column cannot be converted in the corresponding files. Details:
at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.nextIterator(FileScanRDD.scala:226)
at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.hasNext(FileScanRDD.scala:130)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:291)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:283)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$24.apply(RDD.scala:836)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:123)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
... 3 more
Caused by: org.apache.parquet.io.ParquetDecodingException: Can not read value at 1 in block 0 in file s3://path_to_my_file.snappy.parquet
at org.apache.parquet.hadoop.InternalParquetRecordReader.nextKeyValue(InternalParquetRecordReader.java:251)
at org.apache.parquet.hadoop.ParquetRecordReader.nextKeyValue(ParquetRecordReader.java:207)
at org.apache.spark.sql.execution.datasources.RecordReaderIterator.hasNext(RecordReaderIterator.scala:39)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.hasNext(FileScanRDD.scala:130)
at org.apache.spark.sql.execution.datasources.FileScanRDD$$anon$1.nextIterator(FileScanRDD.scala:214)
... 21 more
Caused by: java.lang.ClassCastException: [B cannot be cast to java.lang.Long
at scala.runtime.BoxesRunTime.unboxToLong(BoxesRunTime.java:105)
at org.apache.spark.sql.catalyst.expressions.MutableLong.update(SpecificInternalRow.scala:148)
at org.apache.spark.sql.catalyst.expressions.SpecificInternalRow.update(SpecificInternalRow.scala:228)
at org.apache.spark.sql.execution.datasources.parquet.ParquetRowConverter$RowUpdater.set(ParquetRowConverter.scala:164)
at org.apache.spark.sql.execution.datasources.parquet.ParquetPrimitiveConverter.addBinary(ParquetRowConverter.scala:90)
at org.apache.parquet.column.impl.ColumnReaderImpl$2$6.writeValue(ColumnReaderImpl.java:317)
at org.apache.parquet.column.impl.ColumnReaderImpl.writeCurrentValueToConverter(ColumnReaderImpl.java:367)
at org.apache.parquet.io.RecordReaderImplementation.read(RecordReaderImplementation.java:406)
at org.apache.parquet.hadoop.InternalParquetRecordReader.nextKeyValue(InternalParquetRecordReader.java:226)
... 26 more
The strange thing when I read whole bucket with all partitions the error appears, but when I try to read just the file which resulted the issue, it is fine. The column has Long type. When I drop that column, everything works fine.
Any ideas?