Invalid numeric literal when running jq from script via crontab - linux

I have a shell script that runs fine from the command line but throws a error when it's run from a cronjob. What could be causing this error?
The following includes the cron, the script, and the error I'm getting in /var/spool/mail.
[jira-svc ~]$ cat jira_trigger_updater.sh
#!/usr/bin/sh
tmp_file=/tmp/merge-issues/$(date --iso-8601=minutes).txt
mkdir -p /tmp/merge-issues
/usr/bin/curl -s -X GET -H "Content-Type: application/json" "https://services-gateway.g054.usdcag.aws.ray.com/project-management/rest/api/2/search?jql=filter%3D14219&fields=key,status,fixVersions" -u jira-svc:${UPDATE_TRIGGER_PASSWORD} > ${tmp_file}
/usr/bin/jq -r '.issues[] | [.key , .fields.status.name , .fields.fixVersions[].name] | join(",")' ${tmp_file} > /rational/triggers/inputs/jira_merge.csv
/usr/bin/chmod 644 /rational/triggers/inputs/jira_merge.csv
#rm -rf /tmp/merge-issues
[jira-svc ~]$ crontab -l
#*/1 * * * * /usr/bin/sh /home/jira-svc/jira_trigger_updater.sh
[jira-svc# ~]$ tail -25 /var/spool/mail/jira-svc
From jira-svc#cc01-217-136.localdomain Tue Feb 8 20:10:02 2022
Return-Path: <jira-svc#cc01-217-136.localdomain>
X-Original-To: jira-svc
Delivered-To: jira-svc#cc01-217-136.localdomain
Received: by cc01-217-136.localdomain (Postfix, from userid 1001)
id 9C40168152B5; Tue, 8 Feb 2022 20:10:02 +0000 (UTC)
From: "(Cron Daemon)" <jira-svc#cc01-217-136.localdomain>
To: jira-svc#cc01-217-136.localdomain
Subject: Cron <jira-svc#cc01-217-136> /usr/bin/sh /home/jira-svc/jira_trigger_updater.sh
Content-Type: text/plain; charset=UTF-8
Auto-Submitted: auto-generated
Precedence: bulk
X-Cron-Env: <XDG_SESSION_ID=2172>
X-Cron-Env: <XDG_RUNTIME_DIR=/run/user/1001>
X-Cron-Env: <LANG=en_US.UTF-8>
X-Cron-Env: <SHELL=/bin/sh>
X-Cron-Env: <HOME=/home/jira-svc>
X-Cron-Env: <PATH=/usr/bin:/bin>
X-Cron-Env: <LOGNAME=jira-svc>
X-Cron-Env: <USER=jira-svc>
Message-Id: <20220208201002.9C40168152B5#cc01-217-136.localdomain>
Date: Tue, 8 Feb 2022 20:10:02 +0000 (UTC)
parse error: Invalid numeric literal at line 13, column 0
[jira-svc ~]$

Cron runs jobs from a non-ineractive, non-login shell and doesn't load environment variables from files like ~/.bashrc, ~/.bash_profile, /etc/profile, and others. You must source these files if you want to include the environment variables defined in them.

Related

Unable to run cron job with standard user account

The same job can be executed as root, but it can't execute as a standard user.
Is it permission problem or I need to change anything, I have no idea on it.
Thanks
SunOS 5.10 Generic_150400-30 sun4v sparc SUNW,SPARC-Enterprise-T5120
Command:
1) login as a root
2) crontab -l
* * * * * /usr/bin/date > /tmp/root.log
3) /tmp/root.log is here
1) login as a Non-root user
2) crontab -l
* * * * * /usr/bin/date > /tmp/non-root.log
3) /tmp/non-root.log is not here
The following permissions are OK for the binary file date
-bash-3.2# ls -l /usr/bin/date
-r-xr-xr-x 1 root bin 11056 Jan 22 2005 /usr/bin/date
-bash-3.2#
If the permissions are OK check your cron log on /var/cron/log file
-bash-3.2# tail /var/cron/log
< root 24592 c Fri Oct 20 18:50:21 2017
> CMD: /usr/bin/date > /tmp/non-root.log
> user 25192 c Fri Oct 20 18:51:00 2017
< user 25192 c Fri Oct 20 18:51:00 2017
> CMD: /scripts/collectdata.sh > /dev/null 2>&1
> root 25769 c Fri Oct 20 18:52:00 2017
< root 25769 c Fri Oct 20 18:52:00 2017
> CMD: /scripts/collectdata.sh > /dev/null 2>&1
> root 26853 c Fri Oct 20 18:54:00 2017
< root 26853 c Fri Oct 20 18:54:00 2017
-bash-3.2#
Thanks all, I finally found out the issue.
The reason is that non-root account is locked out, I think it maybe someone did many failure attempt which make this locked.
After I passwd -u "Account", the job can be run as expected. Thanks~

Trouble running Airflow on reboot

We're running an Ubuntu 15.10 virtual machine. I edited the user crontab to have the following lines:
#reboot /usr/local/bin/airflow schedule -D
#reboot /usr/local/bin/airflow webserver -D
In the syslog I get the following lines:
Feb 16 10:48:58 SERVERNAME cron[723]: (CRON) INFO (Running #reboot jobs)
Feb 16 10:48:58 SERVERNAME CRON[748]: (username) CMD (airflow schedule -D)
Feb 16 10:48:58 SERVERNAME CRON[749]: (username) CMD (airflow webserver -D)
If I run those lines while logged in they work, but not on restart. I'm not all that skilled at Linux, so I'm assuming there's something easy I'm missing here.
I get this output sent to my "Mail" on restart.
X-Original-To: analytics
Delivered-To: analytics#PARKAT1TEST
Received: by PARKAT1TEST (Postfix, from userid 1005)
id 78011101C51; Thu, 16 Feb 2017 12:15:47 -0600 (CST)
From: root#PARKAT1TEST (Cron Daemon)
To: analytics#PARKAT1TEST
Subject: Cron <analytics#PARKAT1TEST> /usr/local/bin/airflow webserver -D
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit
X-Cron-Env: <SHELL=/bin/sh>
X-Cron-Env: <HOME=/home/analytics>
X-Cron-Env: <PATH=/usr/bin:/bin>
X-Cron-Env: <LOGNAME=analytics>
Message-Id: <20170216181547.78011101C51#PARKAT1TEST>
Date: Thu, 16 Feb 2017 12:15:47 -0600 (CST)
[2017-02-16 12:15:45,610] {__init__.py:36} INFO - Using executor SequentialExecutor
[2017-02-16 12:15:45,879] {driver.py:120} INFO - Generating grammar tables from /usr/lib/python3.4/lib2to3/Grammar.txt
[2017-02-16 12:15:45,908] {driver.py:120} INFO - Generating grammar tables from /usr/lib/python3.4/lib2to3/PatternGrammar$
____________ _____________
____ |__( )_________ __/__ /________ __
____ /| |_ /__ ___/_ /_ __ /_ __ \_ | /| / /
___ ___ | / _ / _ __/ _ / / /_/ /_ |/ |/ /
_/_/ |_/_/ /_/ /_/ /_/ \____/____/|__/
[2017-02-16 12:15:47,033] {models.py:154} INFO - Filling up the DagBag from /home/analytics/airflow/dags
Running the Gunicorn server with 4 syncworkers on host 0.0.0.0 and port 8080 with a timeout of 120...
Traceback (most recent call last):
File "/usr/local/bin/airflow", line 15, in <module>
args.func(args)
File "/usr/local/lib/python3.4/dist-packages/airflow/bin/cli.py", line 423, in webserver
'gunicorn', run_args
File "/usr/lib/python3.4/os.py", line 523, in execvp
_execvpe(file, args)
File "/usr/lib/python3.4/os.py", line 568, in _execvpe
raise last_exc.with_traceback(tb)
File "/usr/lib/python3.4/os.py", line 558, in _execvpe
exec_func(fullname, *argrest)
FileNotFoundError: [Errno 2] No such file or directory
All the files registered in the error message exist; and it still runs fine when logged in and run manually.

Crontab throwing error

I have the following content in crontab:
20 1,7,13,18 * * * /usr/sbin/automysqlbackup
15 * * * * root find /opt/activeMq/activemq-data/localhost/KahaDB/ -mtime +10 -type f -delete
but I get this when I restart cron service:
Feb 20 08:43:27 . crontab[14584]: (root) BEGIN EDIT (root)
Feb 20 08:44:08 . crontab[14584]: (root) REPLACE (root)
Feb 20 08:44:08 . crontab[14584]: (root) END EDIT (root)
Feb 20 08:44:28 . kernel: [325740.483115] init: cron main process (14563) killed by TERM signal
Feb 20 08:44:28 . cron[14641]: (CRON) INFO (pidfile fd = 3)
Feb 20 08:44:28 . cron[14642]: (CRON) STARTUP (fork ok)
Feb 20 08:44:28 . cron[14642]: Error: bad username; while reading /etc/crontab
Feb 20 08:44:28 . cron[14642]: (*system*) ERROR (Syntax error, this crontab file will be ignored)
Feb 20 08:44:28 . cron[14642]: (CRON) INFO (Skipping #reboot jobs -- not system startup)
I found the solution. Username field is only available at system level cron(etc/crontab) and not user level cron.

How to monitor newly created file in a directory with bash?

I have a log directory that consists of bunch of log files, one log file is created once an system event has happened. I want to write an oneline bash script that always monitors the file list and display the content of the newly created file on the terminal. Here is what it looks like:
Currently, all I have is to display the content of the whole directory:
for f in *; do cat $f; done
It lacks the monitoring feature that I wanted. One limitation of my system is that I do not have watch command. I also don't have any package manager to install fancy tools. Raw BSD is all I have. I do have tail, I was thinking of something like tail -F $(ls) but this tails each file instead of the file list.
In summary, I want to modify my script such that I can monitor the content of all newly created files.
First approach - use a hidden file in you dir (in my example it has a name .watch). Then you one-liner might look like:
for f in $(find . -type f -newer .watch); do cat $f; done; touch .watch
Second approach - use inotify-tools: https://unix.stackexchange.com/questions/273556/when-a-particular-file-arrives-then-execute-a-procedure-using-shell-script/273563#273563
You can cram it into a one-liner if you want, but I'd recommend just running the script in the background:
#!/bin/bash
[ ! -d "$1" ] && {
printf "error: argument is not a valid directory to monitory.\n"
exit 1
}
while :; fname="$1/$(inotifywait -q -e modify -e create --format '%f' "$1")"; do
cat "$fname"
done
Which will watch the directory given as the first argument, and cat any new or changed file in that directory. Example:
$ bash watchdir.sh my_logdir &
Which will then cat new or changed files in my_logdir.
Using inotifywait in monitor mode
First this little demo:
Open one terminal and run this:
ext=(php css other)
while :;do
subname=''
((RANDOM%10))||printf -v subname -- "-%04x" $RANDOM
date >/tmp/test$subname.${ext[RANDOM%3]}
sleep 1
done
This will create randomly files named /tmp/test.php, /tmp/test.css and /tmp/test.other, but randomly (approx 1 time / 10), the name will be /tmp/test-XXXX.[css|php|other] where XXXX is an hexadecimal random number.
Open another terminal and run this:
waitPaths=(/{home,tmp})
while read file ;do
if [ "$file" ] &&
( [ -z "${file##*.php}" ] || [ -z "${file##*.css}" ] ) ;then
(($(stat -c %Y-%X $file)))||echo -n new
echo file: $file, content:
cat $file
fi
done < <(
inotifywait -qme close_write --format %w%f ${waitPaths[*]}
)
This may produce something like:
file: /tmp/test.css, content:
Tue Apr 26 18:53:19 CEST 2016
file: /tmp/test.php, content:
Tue Apr 26 18:53:21 CEST 2016
file: /tmp/test.php, content:
Tue Apr 26 18:53:23 CEST 2016
file: /tmp/test.css, content:
Tue Apr 26 18:53:25 CEST 2016
file: /tmp/test.php, content:
Tue Apr 26 18:53:27 CEST 2016
newfile: /tmp/test-420b.php, content:
Tue Apr 26 18:53:28 CEST 2016
file: /tmp/test.php, content:
Tue Apr 26 18:53:29 CEST 2016
file: /tmp/test.php, content:
Tue Apr 26 18:53:30 CEST 2016
file: /tmp/test.php, content:
Tue Apr 26 18:53:31 CEST 2016
Some explanation:
waitPaths=(/{home,tmp}) could be written waitPaths=(/home /tmp) or for only one directory: waitPaths=/var/log
if condition search for filenames matching *.php or *.css
(($(stat -c %Y-%X $file)))||echo -n new will compare creation and modification time.
inotifywait
-q to stay quiet (don't print more then required)
-m for monitor mode: Command don't termine, but print each matching event.
-e close_write react only to specified kind of event.
-f %w%f Output format: path/file
Another way:
There is a more sophisticated sample:
Listenning for two kind of events (CLOSE_WRITE | CREATE)
Using a list of new files flags for knowing which files are new when CLOSE_WRITE event occur.
In second console, hit Ctrl+C, or in new terminal, tris this:
waitPaths=(/{home,tmp})
declare -A newFiles
while read path event file; do
if [ "$file" ] && ( [ -z "${file##*.php}" ] || [ -z "${file##*.css}" ] ); then
if [ "$event" ] && [ -z "${event//*CREATE*}" ]; then
newFiles[$file]=1
else
if [ "${newFiles[$file]}" ]; then
unset newFiles[$file]
echo NewFile: $file, content:
sed 's/^/>+ /' $file
else
echo file: $file, content:
sed 's/^/> /' $path/$file
fi
fi
fi
done < <(inotifywait -qme close_write -e create ${waitPaths[*]})
May produce something like:
file: test.css, content:
> Tue Apr 26 22:16:02 CEST 2016
file: test.php, content:
> Tue Apr 26 22:16:03 CEST 2016
NewFile: test-349b.css, content:
>+ Tue Apr 26 22:16:05 CEST 2016
file: test.css, content:
> Tue Apr 26 22:16:08 CEST 2016
file: test.css, content:
> Tue Apr 26 22:16:10 CEST 2016
file: test.css, content:
> Tue Apr 26 22:16:13 CEST 2016
Watching for new files AND new lines in old files, using bash
There is another solution by using some bashisms like associative arrays:
Sample:
wpath=/var/log
while : ;do
while read -a crtfile ;do
if [ "${crtfile:0:1}" = "-" ] &&
[ "${crtfile[8]##*.}" != "gz" ] &&
[ "${files[${crtfile[8]}]:-0}" -lt ${crtfile[4]} ] ;then
printf "\e[47m## %-14s :- %(%a %d %b %y %T)T ##\e[0m\n" ${crtfile[8]} -1
tail -c +$[1+${files[${crtfile[8]}]:-0}] $wpath/${crtfile[8]}
files[${crtfile[8]}]=${crtfile[4]}
fi
done < <( /bin/ls -l $wpath )
sleep 1
done
This will dump each files (with filename not ending by .gz) in /var/log, and watch for modification or new files, then dump new lines.
Demo:
In a first terminal console, hit:
ext=(php css other)
( while :; do
subname=''
((RANDOM%10)) || printf -v subname -- "-%04x" $RANDOM
name=test$subname.${ext[RANDOM%3]}
printf "%-16s" $name
{
date +"%a %d %b %y %T" | tee /dev/fd/5
fortune /usr/share/games/fortunes/bofh-excuses
} >> /tmp/$name
sleep 1
done ) 5>&1
You need to have fortune installed with BOFH excuses librarie.
If you really not have fortune, you could use this instead:
LANG=C ext=(php css other)
( while :; do
subname=''
((RANDOM%10)) || printf -v subname -- "-%04x" $RANDOM
name=test$subname.${ext[RANDOM%3]}
printf "%-16s" $name
{
date +"%a %d %b %y %T" | tee /dev/fd/5
for ((1; RANDOM%5; 1))
do
printf -v str %$[RANDOM&12]s
str=${str// /blah, }
echo ${str%, }.
done
} >> /tmp/$name
sleep 1
done ) 5>&1
This may output something like:
test.css Thu 28 Apr 16 12:00:02
test.php Thu 28 Apr 16 12:00:03
test.other Thu 28 Apr 16 12:00:04
test.css Thu 28 Apr 16 12:00:05
test.css Thu 28 Apr 16 12:00:06
test.other Thu 28 Apr 16 12:00:07
test.php Thu 28 Apr 16 12:00:08
test.css Thu 28 Apr 16 12:00:09
test.other Thu 28 Apr 16 12:00:10
test.other Thu 28 Apr 16 12:00:11
test.php Thu 28 Apr 16 12:00:12
test.other Thu 28 Apr 16 12:00:13
In a second terminal console, hit:
declare -A files
wpath=/tmp
while :; do
while read -a crtfile; do
if [ "${crtfile:0:1}" = "-" ] && [ "${crtfile[8]:0:4}" = "test" ] &&
( [ "${crtfile[8]##*.}" = "css" ] || [ "${crtfile[8]##*.}" = "php" ] ) &&
[ "${files[${crtfile[8]}]:-0}" -lt ${crtfile[4]} ]; then
printf "\e[47m## %-14s :- %(%a %d %b %y %T)T ##\e[0m\n" ${crtfile[8]} -1
tail -c +$[1+${files[${crtfile[8]}]:-0}] $wpath/${crtfile[8]}
files[${crtfile[8]}]=${crtfile[4]}
fi
done < <(/bin/ls -l $wpath)
sleep 1
done
This will each seconds
for all entries in watched directory
search for files (first caracter is -),
search for filenames begining by test,
search for filenames ending by css or php,
compare already printed sizes with new file size,
if new size greater,
print out new bytes by using tail -c and
store new already printed size
sleep 1 seconds
this may output something like:
## test.css :- Thu 28 Apr 16 12:00:09 ##
Thu 28 Apr 16 12:00:02
BOFH excuse #216:
What office are you in? Oh, that one. Did you know that your building was built over the universities first nuclear research site? And wow, aren't you the lucky one, your office is right over where the core is buried!
Thu 28 Apr 16 12:00:05
BOFH excuse #145:
Flat tire on station wagon with tapes. ("Never underestimate the bandwidth of a station wagon full of tapes hurling down the highway" Andrew S. Tannenbaum)
Thu 28 Apr 16 12:00:06
BOFH excuse #301:
appears to be a Slow/Narrow SCSI-0 Interface problem
## test.php :- Thu 28 Apr 16 12:00:09 ##
Thu 28 Apr 16 12:00:03
BOFH excuse #36:
dynamic software linking table corrupted
Thu 28 Apr 16 12:00:08
BOFH excuse #367:
Webmasters kidnapped by evil cult.
## test.css :- Thu 28 Apr 16 12:00:10 ##
Thu 28 Apr 16 12:00:09
BOFH excuse #25:
Decreasing electron flux
## test.php :- Thu 28 Apr 16 12:00:13 ##
Thu 28 Apr 16 12:00:12
BOFH excuse #3:
electromagnetic radiation from satellite debris
Nota: If some file are modified more than one time between two checks, all modification will be printed on next check.
Although not really nice, the following gives (and repeats) the last 50 lines of the newest file in the current directory:
while true; do tail -n 50 $(ls -Art | tail -n 1); sleep 5; done
You can refresh every minute using a cronjob:
$crontabe -e
* * * * * /home/script.sh
if you need to refresh in less than a minute you can use the command "sleep" inside your script.

procmail disregards /etc/group?

sample procmailrc:
SHELL=/bin/bash
LOGFILE=$HOME/procmail.log
VERBOSE=yes
:0
* ^Subject: envdump please$
{
LOG="`id`"
:0
/dev/null
}
/etc/group file contains (note the other usernames are vain attempts to make this work):
someuser:x:504:
s3:x:505:someuser,someotheruser,postfix,postdrop,mail,root
If I run as "someuser" the command id:
[someuser#lixyz-pqr ~]$ id
uid=504(someuser) gid=504(someuser) groups=504(someuser),505(s3)
However when I run procmail by sending an email with the subject "envdump please", the 505/s3 group disappears (this is in procmail.log):
procmail: [17618] Mon Dec 19 17:39:50 2011
procmail: Match on "^Subject: envdump please$"
procmail: Executing "id"
procmail: Assigning "LOG=uid=504(someuser) gid=504(someuser) groups=504(someuser)"
uid=504(someuser) gid=504(someuser) groups=504(someuser)procmail: Assigning "LASTFOLDER=/dev/null"
this server is running Fedora 14 with Postfix 2.7.5
Procmail wasn't installed setuid.
for background, it should look like:
[root#li321-238 postfix]# ls -l /usr/bin/procmail
-rwsr-sr-x. 1 root mail 92816 Jul 28 2009 /usr/bin/procmail
which you can set up via:
chmod ug+s /usr/bin/procmail

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