Simplest way to replace (\n) with (" ") in bash? - linux

In a plain text file, I am trying to get from
Item 1
Item 2
to
"Item 1" "Item 2"
I tried using the tr command (cat FILE.txt | tr "\n" "\" \""),
but that did not work.
I also tried using cat FILE.txt | tr '\n' '\" \"', but again, no avail.
Can anyone help me do it?
Also, as a bonus question, what is the easiest way to get the first double quote?
With my method, if I get it to work, I will end up with:
Item 1" "Item 2"
P.S. Thanks Jorengarenar for helping me with the edit.

One possibility would be to use awk.
awk '{ printf " " "\""$0"\"" }' FILE
For the bonus question, just remove the second quote after the $0 variable.
awk '{ printf " " "\""$0"" }' FILE
If you want another delimiter, you can change the first argument to whatever you like.

Try this:
awk '{printf spacer "\"" $0 "\""; spacer=" "} END {print ""}' FILE.txt
Explanation: for each line, this prints a spacer (which is initially empty), a literal double-quote, the original line (not including its terminating newline), and another literal double-quote. Then, it sets spacer to a single space, so that for all but the first line there'll be a space printed before it. printf doesn't add a newline, so all of this gets printed as a single long line. But at the end, we need to add a final newline, which a normal print takes care of.

If you want to change the file itself, one way using ed:
ed -s file.txt <<'EOF'
1,$ s/^/"/
1,$ s/$/" /
1,$ j
w
EOF
First add a double quote to the beginning of every line, then a double quote and space to the end, and finally join all the lines into one and write the changed file back to disk.

In two steps:
1.cat FILE.txt | tr '\n' ' '
2.sed -E 's:([a-zA-Z0-9]+):"\1":g' FILE.txt

This might work for you (GNU utils):
sed 's/.*/"&"/' file | paste -sd\
or:
sed 's/.*/\\"&\\"/' file | xargs
N.B. The -d option in paste is a backslash followed by a space for the delimiter.

or leverage awk
[gmn]awk -v RS='^$' 'gsub(/^|\n$/,"\"")+gsub(/\n/,"\" \"")'
or
[gmn]awk -v RS='' 'gsub(/^|\n?$/,"\"")+gsub(/\n/,"\" \"")'
not as elegant of a one-liner as i hoped for
third version feels more elegant, but one extra space created at the tail end :
[gmn]awk -v ORS=' ' 'gsub(/^|$/,"\"")'
which can be rectified by one extra sed, which defeats the elegance :
[gmn]awk -v ORS=' ' 'gsub(/^|$/,"\"")' | gsed -z 's/.$//'

Related

Replaceing multiple command calls

Able to trim and transpose the below data with sed, but it takes considerable time. Hope it would be better with AWK. Welcome any suggestions on this
Input Sample Data:
[INX_8_60L ] :9:Y
[INX_8_60L ] :9:N
[INX_8_60L ] :9:Y
[INX_8_60Z ] :9:Y
[INX_8_60Z ] :9:Y
Required Output:
INX?_8_60L¦INX?_8_60L¦INX?_8_60L¦INX?_8_60Z¦INX?_8_60Z
Just use awk, e.g.
awk -v n=0 '{printf (n?"!%s":"%s", substr ($0,2,match($0,/[ \t]+/)-2)); n=1} END {print ""}' file
Which will be orders of magnitude faster. It just picks out the (e.g. "INX_8_60L") substring using substring and match. n is simply used as a false/true (0/1) flag to prevent outputting a "!" before the first string.
Example Use/Output
With your data in file you would get:
$ awk -v n=0 '{printf (n?"!%s":"%s", substr ($0,2,match($0,/[ \t]+/)-2)); n=1} END {print ""}' file
INX_8_60L!INX_8_60L!INX_8_60L!INX_8_60Z!INX_8_60Z
Which appears to be what you are after. (Note: I'm not sure what your separator character is, so just change above as needed) If not, let me know and I'm happy to help further.
Edit Per-Changes
Including the '?' isn't difficult, and I just copied the character, so you would now have:
awk -v n=0 '{s=substr($0,2,match($0,/[ \t]+/)-2); sub(/_/,"?_",s); printf n?"¦%s":"%s", s; n=1}
END {print ""}' file
Example Output
INX?_8_60L¦INX?_8_60L¦INX?_8_60L¦INX?_8_60Z¦INX?_8_60Z
And to simplify, just operating on the first field as in #JamesBrown's answer, that would reduce to:
awk -v n=0 '{s=substr($1,2); sub(/_/,"?_",s); printf n?"¦%s":"%s", s; n=1} END {print ""}' file
Let me know if that needs more changes.
Don't start so many sed commands, separate the sed operations with semicolon instead.
Try to process the data in a single job and avoid regex. Below reading with substr() static sized first block and insterting ? while outputing.
$ awk '{
b=b (b==""?"":";") substr($1,2,3) "?" substr($1,5)
}
END {
print b
}' file
Output:
INX?_8_60L;INX?_8_60L;INX?_8_60L;INX?_8_60Z;INX?_8_60Z
If the fields are not that static in size:
$ awk '
BEGIN {
FS="[[_ ]" # split field with regex
}
{
printf "%s%s?_%s_%s",(i++?";":""), $2,$3,$4 # output semicolons and fields
}
END {
print ""
}' file
Performance of solutions for 20 M records:
Former:
real 0m8.017s
user 0m7.856s
sys 0m0.160s
Latter:
real 0m24.731s
user 0m24.620s
sys 0m0.112s
sed can be very fast when used gingerly, so for simplicity and speed you might wish to consider:
sed -e 's/ .*//' -e 's/\[INX/INX?/' | tr '\n' '|' | sed -e '$s/|$//'
The second call to sed is there to satisfy the requirement that there is no trailing |.
Another solution using GNU awk:
awk -F'[[ ]+' '
{printf "%s%s",(o?"¦":""),gensub(/INX/,"INX?",1,$2);o=1}
END{print ""}
' file
The field separator is set (with -F option) such that it matches the wanted parameter.
The main statement is to print the modified parameter with the ? character.
The variable o allows to keep track of the delimeter ¦.

search for a string and after getting result cut that word and store result in variable

I Have a file name abc.lst i ahve stored that in a variable it contain 3 words string among them i want to grep second word and in that i want to cut the word from expdp to .dmp and store that into variable
example:-
REFLIST_OP=/tmp/abc.lst
cat $REFLIST_OP
34 /data/abc/GOon/expdp_TEST_P119_*_18112017.dmp 12-JAN-18 04.27.00 AM
Desired Output:-
expdp_TEST_P119_*_18112017.dmp
I Have tried below command :-
FULL_DMP_NAME=`cat $REFLIST_OP|grep /orabackup|awk '{print $2}'`
echo $FULL_DMP_NAME
/data/abc/GOon/expdp_TEST_P119_*_18112017.dmp
REFLIST_OP=/tmp/abc.lst
awk '{n=split($2,arr,/\//); print arr[n]}' "$REFLIST_OP"
Test Results:
$ REFLIST_OP=/tmp/abc.lst
$ cat "$REFLIST_OP"
34 /data/abc/GOon/expdp_TEST_P119_*_18112017.dmp 12-JAN-18 04.27.00 AM
$ awk '{n=split($2,arr,/\//); print arr[n]}' "$REFLIST_OP"
expdp_TEST_P119_*_18112017.dmp
To save in variable
myvar=$( awk '{n=split($2,arr,/\//); print arr[n]}' "$REFLIST_OP" )
Following awk may help you on same.
awk -F'/| ' '{print $6}' Input_file
OR
awk -F'/| ' '{print $6}' "$REFLIST_OP"
Explanation: Simply making space and / as a field separator(as per your shown Input_file) and then printing 6th field of the line which is required by OP.
To see the field number and field's value you could use following command too:
awk -F'/| ' '{for(i=1;i<=NF;i++){print i,$i}}' "$REFLIST_OP"
Using sed with one of these regex
sed -e 's/.*\/\([^[:space:]]*\).*/\1/' abc.lst capture non space characters after /, printing only the captured part.
sed -re 's|.*/([^[:space:]]*).*|\1|' abc.lst Same as above, but using different separator, thus avoiding to escape the /. -r to use unescaped (
sed -e 's|.*/||' -e 's|[[:space:]].*||' abc.lst in two steps, remove up to last /, remove from space to end. (May be easiest to read/understand)
myvar=$(<abc.lst); myvar=${myvar##*/}; myvar=${myvar%% *}; echo $myvar
If you want to avoid external command (sed)

Split string at special character in bash

I'm reading filenames from a textfile line by line in a bash script. However the the lines look like this:
/path/to/myfile1.txt 1
/path/to/myfile2.txt 2
/path/to/myfile3.txt 3
...
/path/to/myfile20.txt 20
So there is a second column containing an integer number speparated by space. I only need the part of the string before the space.
I found only solutions using a "for-loop". But I need a function that explicitly looks for the " "-character (space) in my string and splits it at that point.
In principle I need the equivalent to Matlabs "strsplit(str,delimiter)"
If you are already reading the file with something like
while read -r line; do
(and you should be), then pass two arguments to read instead:
while read -r filename somenumber; do
read will split the line on whitespace and assign the first field to filename and any remaining field(s) to somenumber.
Three (of many) solutions:
# Using awk
echo "$string" | awk '{ print $1 }'
# Using cut
echo "$string" | cut -d' ' -f1
# Using sed
echo "$string" | sed 's/\s.*$//g'
If you need to iterate trough each line of the file anyways, you can cut off everything behind the space with bash:
while read -r line ; do
# bash string manipulation removes the space at the end
# and everything which follows it
echo ${line// *}
done < file
This should work too:
line="${line% *}"
This cuts the string at it's last occurrence (from left) of a space. So it will work even if the path contains spaces (as long as it follows by a space at end).
while read -r line
do
{ rev | cut -d' ' -f2- | rev >> result.txt; } <<< $line
done < input.txt
This solution will work even if you have spaces in your filenames.

How to concatenate multiple lines of output to one line?

If I run the command cat file | grep pattern, I get many lines of output. How do you concatenate all lines into one line, effectively replacing each "\n" with "\" " (end with " followed by space)?
cat file | grep pattern | xargs sed s/\n/ /g
isn't working for me.
Use tr '\n' ' ' to translate all newline characters to spaces:
$ grep pattern file | tr '\n' ' '
Note: grep reads files, cat concatenates files. Don't cat file | grep!
Edit:
tr can only handle single character translations. You could use awk to change the output record separator like:
$ grep pattern file | awk '{print}' ORS='" '
This would transform:
one
two
three
to:
one" two" three"
Piping output to xargs will concatenate each line of output to a single line with spaces:
grep pattern file | xargs
Or any command, eg. ls | xargs. The default limit of xargs output is ~4096 characters, but can be increased with eg. xargs -s 8192.
grep xargs
In bash echo without quotes remove carriage returns, tabs and multiple spaces
echo $(cat file)
This could be what you want
cat file | grep pattern | paste -sd' '
As to your edit, I'm not sure what it means, perhaps this?
cat file | grep pattern | paste -sd'~' | sed -e 's/~/" "/g'
(this assumes that ~ does not occur in file)
This is an example which produces output separated by commas. You can replace the comma by whatever separator you need.
cat <<EOD | xargs | sed 's/ /,/g'
> 1
> 2
> 3
> 4
> 5
> EOD
produces:
1,2,3,4,5
The fastest and easiest ways I know to solve this problem:
When we want to replace the new line character \n with the space:
xargs < file
xargs has own limits on the number of characters per line and the number of all characters combined, but we can increase them. Details can be found by running this command: xargs --show-limits and of course in the manual: man xargs
When we want to replace one character with another exactly one character:
tr '\n' ' ' < file
When we want to replace one character with many characters:
tr '\n' '~' < file | sed s/~/many_characters/g
First, we replace the newline characters \n for tildes ~ (or choose another unique character not present in the text), and then we replace the tilde characters with any other characters (many_characters) and we do it for each tilde (flag g).
Here is another simple method using awk:
# cat > file.txt
a
b
c
# cat file.txt | awk '{ printf("%s ", $0) }'
a b c
Also, if your file has columns, this gives an easy way to concatenate only certain columns:
# cat > cols.txt
a b c
d e f
# cat cols.txt | awk '{ printf("%s ", $2) }'
b e
I like the xargs solution, but if it's important to not collapse spaces, then one might instead do:
sed ':b;N;$!bb;s/\n/ /g'
That will replace newlines for spaces, without substituting the last line terminator like tr '\n' ' ' would.
This also allows you to use other joining strings besides a space, like a comma, etc, something that xargs cannot do:
$ seq 1 5 | sed ':b;N;$!bb;s/\n/,/g'
1,2,3,4,5
Here is the method using ex editor (part of Vim):
Join all lines and print to the standard output:
$ ex +%j +%p -scq! file
Join all lines in-place (in the file):
$ ex +%j -scwq file
Note: This will concatenate all lines inside the file it-self!
Probably the best way to do it is using 'awk' tool which will generate output into one line
$ awk ' /pattern/ {print}' ORS=' ' /path/to/file
It will merge all lines into one with space delimiter
paste -sd'~' giving error.
Here's what worked for me on mac using bash
cat file | grep pattern | paste -d' ' -s -
from man paste .
-d list Use one or more of the provided characters to replace the newline characters instead of the default tab. The characters
in list are used circularly, i.e., when list is exhausted the first character from list is reused. This continues until
a line from the last input file (in default operation) or the last line in each file (using the -s option) is displayed,
at which time paste begins selecting characters from the beginning of list again.
The following special characters can also be used in list:
\n newline character
\t tab character
\\ backslash character
\0 Empty string (not a null character).
Any other character preceded by a backslash is equivalent to the character itself.
-s Concatenate all of the lines of each separate input file in command line order. The newline character of every line
except the last line in each input file is replaced with the tab character, unless otherwise specified by the -d option.
If ‘-’ is specified for one or more of the input files, the standard input is used; standard input is read one line at a time,
circularly, for each instance of ‘-’.
On red hat linux I just use echo :
echo $(cat /some/file/name)
This gives me all records of a file on just one line.

UNIX Shell Script remove one column from the file

I have a file like the following:
Header1:value1|value2|value3|
Header2:value4|value5|value6|
The column number is unknown and I have a function which can return the column number.
And I want to write a script which can remove one column from the file. For exampple, after removing column 1, I will get:
Header1:value2|value3|
Header2:value5|value6|
I use cut to achieve this and so far I can give the values after removing one column but without the headers. For example
value2|value3|
value5|value6|
Could anyone tell me how can I add headers back? Or any command can do that directly? Thanks.
Replace the colon with a pipe, do your cut command, then replace the first pipe with a colon again:
sed 's/:/|/' input.txt | cut ... | sed 's/|/:/'
You may need to adjust the column number for the cut command, to ensure you don't count the header.
Turn the ':' into '|', so that the header is another field, rather than part of the first field. You can do that either in whatever generates the data to begin with, or by passing the data through tr ':' '|' before cut. The rest of your fields will be offset by +1 then, but that should be easy enough to compensate for.
Your problem is that HeaderX are followed by ':' which is not the '|' delimiter you use in cut.
You could separate first your lines in two parts with :, with something like
"cut -f 1 --delimiter=: YOURFILE", then remove the first column and then put back the headers.
awk can handle multiple delimiters. So another alternative is...
jkern#ubuntu:~/scratch$ cat ./data188
Header1:value1|value2|value3|
Header2:value4|value5|value6|
jkern#ubuntu:~/scratch$ awk -F"[:|]" '{ print $1 $3 $4 }' ./data188
Header1value2value3
Header2value5value6
you can do it just with sed without cut:
sed 's/:[^|]*|/:/' input.txt
My solution:
$ sed 's,:,|,' data | awk -F'|' 'BEGIN{OFS="|"}{$2=""; print}' | sed 's,||,:,'
Header1:value2|value3|
Header2:value5|value6|
replace : with |
-F'|' tells awk to use | symbol as field separator
in each line we replace 2nd (because header now becomes first) field with empty string and printing result line with new field separator (|)
return back header by replacing first | with :
Not perfect, but should works.
$ cat file.txt | grep 'Header1' | awk -F"1" '{ print $1 $2 $3 $4}'
This will print all values in separate columns. You can print any number of columns.
Just chiming in with a Perl solution:
(rearrange/remove fields as needed)
-l effectively adds a newline to every print statement
-a autosplit mode splits each line using the -F expression into array #F
-n adds a loop around the -e code
-e your 'one liner' follows this option
$ perl -F[:\|] -lane 'print "$F[0]:$F[1]|$F[2]|$F[3]"' input.txt

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