How to calculate PostgreSQL memory usage on Linux? - linux

I searched a lot about how to calculate memory usage of PostgreSQL process on Linux. I read article about how to calculate Memory usage for a generic process but I think that PostgreSQL has some peculiarity. For example, it has some basic processes:logger, checkpointer, bg writer, etc. But Linux creates also a process for each client connection on the master node.
The easy way to calculate the memory usage is with ps command listing the RSS of each process:
ps -aux | grep -v grep | grep postgres | awk '{ print $6 }'
and then sum it. But this doesn't work since the result is larger than the total memory.
Some articles suggest the use of:
/proc/PID/smaps
but as said above I have more PID and I am unable to find a website that shows a script that let me easily calculate this information.
I found this interesting article, but it's not clear to me how to convert it into a working script.
https://www.depesz.com/2012/06/09/how-much-ram-is-postgresql-using/
Does anyone know which is the best approach to solve this issue?

To apply the information from the blog you quote:
ps -u postgres o pid= | \
sed 's# *\(.*\)#/proc/\1/smaps#' | \
xargs sudo grep ^Pss: | \
awk '{A+=$2} END{print A}'
first, get the process numbers of all processes running under user postgres
then get the name of the corresponding smaps file (/proc/PID/smaps)
then get the Pss line from that file, which contains the “proportional stack size” which divides shared memory by the number of processes attached to it
finally, add up the numbers

Related

Get peak memory as integer on Linux and Mac with the same command

is there a way to get peak memory of a process on Mac and Linux with the same shell command?
Right now I have such logic working on Linix:
/usr/bin/time -f "%M" myProc 2>$1 | tee memory | tail -n 1 "$log" | int($1)
where time -f "%M" changes the output of time to only show peak memory and the rest is getting the value as an integer.
Now I need to do the same for Mac but it does not understand -f, I have tried to use
TIMEFMT='%M'
time myProc 2>$1 | tee memory
but it stopped working on Linux and had bunch of extra ouput on Mac.
Is there a way to do it better without installing additional dependencies?
Thanks.

Calculate CPU usage from top command in linux

I have to display the CPU usage on my application and update it in real time. I am using top command to get the CPU usage i.e.
I add the two highlighted values to get the CPU usage. The command which i am using to add the highlighted values and get the final CPU usage is:
top -b -n 2 | grep Cpu | awk '{printf "CPU Load:%.2f\n", $(NF-13) + $(NF-15)}' | sed -n '2 p'
Issues is that, this command stops working after sometime i.e. for 3-4 minutes i do get the CPU usage but after that command does not process and i do not get the updated value. I am running this command in a loop.
Any help would be much appreciated.
I am using the similar script without issues for some time now:
top -bn2 | grep Cpu | tail -n1 | sed -e 's/.*, *\([0-9.]*\)%* id.*/\1/' | awk '{print 100-$1}'
The script takes the 'idle' time from top output and deduct it from 100% to get cpu usage.
The periodicity of the loop in which you are calling the script should not be faster than the time needed for the script to finish. Otherwise, you may get multiple 'top's running in parallel. This primarily depends on the 'top' default delay on your system, on mine, it is about 5s, but you can set this with -d switch.

How to get CPU usage from related processes?

If I run top -p $(pgrep -d',' scrapy) I get information on the scrapy process, but this process probably triggers other python related processes. How can I get information on these processes as well in real time as the top command does?
Thanks,
Dani
What you're looking for is a program or script that will gather the CPU usage of all child processes spawned by scrapy.
If you wanted to script this yourself, you could look at the output of ps -p {scrapy pid} -L to get all the threads spawned by the instantiation of scrapy.
Or, you could chain together a couple Linux commands to have a one-liner:
ps -C scrapy -o pcpu= | awk '{cpu_usage+=$1} END {print cpu_usage}'
ps:
-C specifies the command name to output
-o pcou= tells ps to only display cpu usage
awk:
{cpu_usage+=$1} END loops over the response from ps
{print cpu_usage} will send the sum to STDOUT.

How to log the memory consumption on Linux?

Is there any ready-to-use solution to log the memory consumption from the start of the system? I'd like to log the data to simple text file or some database so I can analyze it later.
I'm working on Linux 2.4-based embedded system. I need to debug the problem related to memory consumption. My application automatically start on every system start. I need the way to get the data with timestamps from regular intervals (as often as possible), so I can track down problem.
The symptoms of my problem: when system starts it launched my main application and GUI to visualize the main parameters of the system. GUI based on GTK+ (X server). If I disable GUI and X server then my application works OK. If I enable GUI and X server it does not work when I have 256 MiB or 512 MiB of physical memory installed on the motherboard. If I have 1 GiB of memory installed then everything is OK.
The following script prints time stamps and a header.
#!/bin/bash -e
echo " date time $(free -m | grep total | sed -E 's/^ (.*)/\1/g')"
while true; do
echo "$(date '+%Y-%m-%d %H:%M:%S') $(free -m | grep Mem: | sed 's/Mem://g')"
sleep 1
done
The output looks like this (tested on Ubuntu 15.04, 64-bit).
date time total used free shared buffers cached
2015-08-01 13:57:27 24002 13283 10718 522 693 2308
2015-08-01 13:57:28 24002 13321 10680 522 693 2308
2015-08-01 13:57:29 24002 13355 10646 522 693 2308
2015-08-01 13:57:30 24002 13353 10648 522 693 2308
A small script like
rm memory.log
while true; do free >> memory.log; sleep 1; done
I am a big fan of logging everything and I find it useful to know which processes are using the memory and how much each process is using (as well as sumary statistics). The following command records a top printout ordered by memory consumption every 0.5 seconds:
top -bd0.5 -o +%MEM > memory.log
Just note that the log file will grow a lot faster than if you only store the total memory utilization statistics so be sure you don't run out of disk space.
There's a program called
sar
on *nix systems. You could try to use that to monitor memory usage. It takes measurements at regular intervals. Do a
man sar
for more details. I think the option is -r for taking memory measurements, -i to specify the interval you'd like.
I think adding a crontab entry will be enough
*/5 * * * * free -m >> some_output_file
There are other tools like SeaLion, New Relic, Server Density etc which will almost do the same but are much easier to install and configure. My favorite is SeaLion, as it being free and also it gives a awesome timeline view of raw outputs of common linux commands.
You could put something like
vmstat X >> mylogfile
into a startup script. Since your application is already in startup you could just add this line to the end of the initialization script your application is already using.
(where X is # of seconds between log messages)
To periodically log the memory usage efficiently, I combined another answer here with a method to only retain the top-K memory-using processes.
top -bd 1.5 -o +%MEM | grep "load average" -A 9 > memory_usage.log
This command will record, every 1.5s, the top header information and the 3 highest memory-consuming processes (there's a 6-line offset for top's header information). This saves lots of disk space over recording top's information for every process.
So I know that I am late to this game, but I just came up with this answer, as I needed to do this, and really didn't want the extra fields that vmstat, free, etc... all will seem to output without excess filtering. So here is the answer that I came up with:
top -bd 0.1 | grep 'KiB Mem' | cut -d' ' -f10 > memory.txt
OR:
top -bd 0.1 | grep 'KiB Mem' | cut -d' ' -f10 | tee memory.txt
the standard output from top when grep ing with Kib Mem is:
KiB Mem : 16047368 total, 8708172 free, 6015720 used, 1323476 buff/cache
By running this through cut, we filter down to literally just the number prior to used
The user can indeed modify the 0.1 to another number in order to run different capture sample rates. In my case I wanted to use top also because you can run memory stats faster than 1 second per capture, as you can see here I wanted to capture a stat every 1/10th of a second.
NOTES:
It does turn out that piping through cut cause MASSIVE delay in getting anything out to file. As we later found out, it is much faster to leave out the cut command during data acquisition, then perform the cut command on the output file later.
Also, we had no need for timestamps in our tests.
This thus looks as follows:
Begin Logging:
top -bd 0.1 | grep 'KiB Mem' | tee memory_raw.txt
Exit Logging:
ctrl-z (to exit logging)
Filter:
2 levels of cut (filtering), first by comma, then by space. This is due to the alignment of top and provides much cleaner output:
cut memory_raw -d',' -f3 | tee memory_used_withlabel.txt
cut memory_used_withlabel.txt -d' ' -f3 | tee memory_used.txt

How can I monitor the thread count of a process on linux?

I would like to monitor the number of threads used by a specific process on Linux.
Is there an easy way to get this information without impacting the performance of the process?
try
ps huH p <PID_OF_U_PROCESS> | wc -l
or htop
To get the number of threads for a given pid:
$ ps -o nlwp <pid>
Where nlwp stands for Number of Light Weight Processes (threads). Thus ps aliases nlwp to thcount, which means that
$ ps -o thcount <pid>
does also work.
If you want to monitor the thread count, simply use watch:
$ watch ps -o thcount <pid>
To get the sum of all threads running in the system:
$ ps -eo nlwp | tail -n +2 | awk '{ num_threads += $1 } END { print num_threads }'
Each thread in a process creates a directory under /proc/<pid>/task. Count the number of directories, and you have the number of threads.
cat /proc/<PROCESS_PID>/status | grep Threads
ps -eLf on the shell shall give you a list of all the threads and processes currently running on the system.
Or, you can run top command then hit 'H' to toggle thread listings.
$ ps H p pid-id
H - Lists all the individual threads in a process
or
$cat /proc/pid-id/status
pid-id is the Process ID
eg.. (Truncated the below output)
root#abc:~# cat /proc/8443/status
Name: abcdd
State: S (sleeping)
Tgid: 8443
VmSwap: 0 kB
Threads: 4
SigQ: 0/256556
SigPnd: 0000000000000000
If you use:
ps uH p <PID_OF_U_PROCESS> | wc -l
You have to subtract 1 to the result, as one of the lines "wc" is counting is the headers of the "ps" command.
My answer is more gui, but still within terminal. Htop may be used with a bit of setup.
Start htop.
Enter setup menu by pressing F2.
From leftmost column choose "Columns"
From rightmost column choose the column to be added to main monitoring output, "NLWP" is what you are looking for.
Press F10.
JStack is quite inexpensive - one option would be to pipe the output through grep to find active threads and then pipe through wc -l.
More graphically is JConsole, which displays the thread count for a given process.
Here is one command that displays the number of threads of a given process :
ps -L -o pid= -p <pid> | wc -l
Unlike the other ps based answers, there is here no need to substract 1 from its output as there is no ps header line thanks to the -o pid=option.
Newer JDK distributions ship with JConsole and VisualVM. Both are fantastic tools for getting the dirty details from a running Java process. If you have to do this programmatically, investigate JMX.
If you're looking for thread count for multiple processes, the other answers won't work well for you, since you won't see the process names or PIDs, which makes them rather useless. Use this instead:
ps -o pid,nlwp,args -p <pid_1> <pid_2> ... <pid_N>
In order to watch the changes live, just add watch:
watch ps -o pid,nlwp,args -p <pid_1> <pid_2> ... <pid_N>
jvmtop can show the current jvm thread count beside other metrics.
The easiest way is using "htop". You can install "htop" (a fancier version of top) which will show you all your cores, process and memory usage.
Press "Shift+H" to show all process or press again to hide it.
Press "F4" key to search your process name.
Installing on Ubuntu or Debian:
sudo apt-get install htop
Installing on Redhat or CentOS:
yum install htop
dnf install htop [On Fedora 22+ releases]
If you want to compile "htop" from source code, you will find it here.
If you are trying to find out the number of threads using cpu for a given pid I would use:
top -bc -H -n2 -p <pid> | awk '{if ($9 != "0.0" && $1 ~ /^[0-9]+$/) print $1 }' | sort -u | wc -l
If you want the number of threads per user in a linux system then you should use:
ps -eLf | grep <USER> | awk '{ num += $6 } END { print num }'
where as <USER> use the desired user name.
If you're interested in those threads which are really active -- as in doing something (not blocked, not timed_waiting, not reporting "thread running" but really waiting for a stream to give data) as opposed to sitting around idle but live -- then you might be interested in jstack-active.
This simple bash script runs jstack then filters out all the threads which by heuristics seem to be idling, showing you stack traces for those threads which are actually consuming CPU cycles.
First get the process ID (pid) by executing below command:
ps -ef | grep (for e.g ps -ef | grep java)
Now replace the pid in below command and execute to get the total thread count of a process.
ps huH p | wc -l
VisualVM can show clear states of threads of a given JVM process

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