How to fix MongoDB Fatal Assertion 28595 error? - linux

Question

I'm trying to get mongo server up and running in a docker container but getting error:
2020-07-29T21:15:58.518-0500 I CONTROL [main] ***** SERVER RESTARTED *****
2020-07-29T21:15:58.621-0500 I CONTROL [main] Automatically disabling TLS 1.0, to force-enable TLS 1.0 specify --sslDisabledProtocols 'none'
2020-07-29T21:15:58.681-0500 W ASIO [main] No TransportLayer configured during NetworkInterface startup
2020-07-29T21:15:58.684-0500 I CONTROL [initandlisten] MongoDB starting : pid=747 port=27017 dbpath=/app/database 64-bit host=610312a6720b
2020-07-29T21:15:58.686-0500 I CONTROL [initandlisten] db version v4.2.8
2020-07-29T21:15:58.687-0500 I CONTROL [initandlisten] git version: 43d25964249164d76d5e04dd6cf38f6111e21f5f
2020-07-29T21:15:58.689-0500 I CONTROL [initandlisten] OpenSSL version: OpenSSL 1.1.1 11 Sep 2018
2020-07-29T21:15:58.690-0500 I CONTROL [initandlisten] allocator: tcmalloc
2020-07-29T21:15:58.692-0500 I CONTROL [initandlisten] modules: none
2020-07-29T21:15:58.693-0500 I CONTROL [initandlisten] build environment:
2020-07-29T21:15:58.694-0500 I CONTROL [initandlisten] distmod: ubuntu1804
2020-07-29T21:15:58.696-0500 I CONTROL [initandlisten] distarch: x86_64
2020-07-29T21:15:58.697-0500 I CONTROL [initandlisten] target_arch: x86_64
2020-07-29T21:15:58.698-0500 I CONTROL [initandlisten] options: { config: "/etc/mongod.conf", net: { bindIp: "0.0.0.0", port: 27017 }, processManagement: { timeZoneInfo: "/usr/share/zoneinfo" }, storage: { dbPath: "/app/database", journal: { enabled: true } }, systemLog: { destination: "file", logAppend: true, path: "/app/database/log/mongodb/mongod.log" } }
2020-07-29T21:15:58.711-0500 I STORAGE [initandlisten] Detected data files in /app/database created by the 'wiredTiger' storage engine, so setting the active storage engine to 'wiredTiger'.
2020-07-29T21:15:58.715-0500 I STORAGE [initandlisten] wiredtiger_open config: create,cache_size=483M,cache_overflow=(file_max=0M),session_max=33000,eviction=(threads_min=4,threads_max=4),config_base=false,statistics=(fast),log=(enabled=true,archive=true,path=journal,compressor=snappy),file_manager=(close_idle_time=100000,close_scan_interval=10,close_handle_minimum=250),statistics_log=(wait=0),verbose=[recovery_progress,checkpoint_progress],
2020-07-29T21:15:59.442-0500 E STORAGE [initandlisten] WiredTiger error (1) [1596075359:442302][747:0x7faa34ed4b00], file:WiredTiger.wt, connection: __posix_open_file, 667: /app/database/WiredTiger.wt: handle-open: open: Operation not permitted Raw: [1596075359:442302][747:0x7faa34ed4b00], file:WiredTiger.wt, connection: __posix_open_file, 667: /app/database/WiredTiger.wt: handle-open: open: Operation not permitted
2020-07-29T21:15:59.475-0500 E STORAGE [initandlisten] WiredTiger error (1) [1596075359:475036][747:0x7faa34ed4b00], file:WiredTiger.wt, connection: __posix_open_file, 667: /app/database/WiredTiger.wt: handle-open: open: Operation not permitted Raw: [1596075359:475036][747:0x7faa34ed4b00], file:WiredTiger.wt, connection: __posix_open_file, 667: /app/database/WiredTiger.wt: handle-open: open: Operation not permitted
2020-07-29T21:15:59.504-0500 E STORAGE [initandlisten] WiredTiger error (1) [1596075359:504949][747:0x7faa34ed4b00], file:WiredTiger.wt, connection: __posix_open_file, 667: /app/database/WiredTiger.wt: handle-open: open: Operation not permitted Raw: [1596075359:504949][747:0x7faa34ed4b00], file:WiredTiger.wt, connection: __posix_open_file, 667: /app/database/WiredTiger.wt: handle-open: open: Operation not permitted
2020-07-29T21:15:59.533-0500 E STORAGE [initandlisten] WiredTiger error (1) [1596075359:533624][747:0x7faa34ed4b00], file:WiredTiger.wt, connection: __posix_open_file, 667: /app/database/WiredTiger.wt: handle-open: open: Operation not permitted Raw: [1596075359:533624][747:0x7faa34ed4b00], file:WiredTiger.wt, connection: __posix_open_file, 667: /app/database/WiredTiger.wt: handle-open: open: Operation not permitted
2020-07-29T21:15:59.538-0500 W STORAGE [initandlisten] Failed to start up WiredTiger under any compatibility version.
2020-07-29T21:15:59.539-0500 F STORAGE [initandlisten] Reason: 1: Operation not permitted
2020-07-29T21:15:59.540-0500 F - [initandlisten] Fatal Assertion 28595 at src/mongo/db/storage/wiredtiger/wiredtiger_kv_engine.cpp 915
2020-07-29T21:15:59.540-0500 F - [initandlisten]
Running the following command starts the server fine and is accessible outside docker container:
mongod --dbpath /app/database
but when following command is ran Mongo logs the above mentioned error log into the log file
service mongodb start
or
sudo service mongodb start
Not sure why this issue is causing. Kindly help. Thank you.