Fortran program cannot compile - linux

I get this error when I try to make my fortran program, how can I solve this?
mpifort verison: GNU Fortran (GCC) 4.8.5
gfortran version: GNU Fortran (GCC) 8.2.0
mpirun version : 3.2.1
gfortran -I/Users/mada0007/Documents/softwares/RegCM-4.6.1/external -I/usr/local/include -I/usr/local/include -I/Users/mada0007/Documents/softwares/RegCM-4.6.1/Share -D'SVN_REV="tag- 4.6.1"' -O3 -fconvert=big-endian -fno-range-check -fPIC -c mod_mpmessage.F90
gfortran -I/Users/mada0007/Documents/softwares/RegCM-4.6.1/external -I/usr/local/include -I/usr/local/include -I/Users/mada0007/Documents/softwares/RegCM-4.6.1/Share -D'SVN_REV="tag- 4.6.1"' -O3 -fconvert=big-endian -fno-range-check -fPIC -c mod_regcm_types.F90
gfortran -I/Users/mada0007/Documents/softwares/RegCM-4.6.1/external -I/usr/local/include - I/usr/local/include -I/Users/mada0007/Documents/softwares/RegCM-4.6.1/Share -D'SVN_REV="tag- 4.6.1"' -O3 -fconvert=big-endian -fno-range-check -fPIC -c mod_runparams.F90
mpifort -I/Users/mada0007/Documents/softwares/RegCM-4.6.1/external -I/usr/local/include -I/usr/local/include -I/Users/mada0007/Documents/softwares/RegCM-4.6.1/Share -O3 -fconvert=big- endian -fno-range-check -fPIC -c mod_mppparam.F90
mod_mppparam.F90:22.6:
use mod_intkinds
1
Fatal Error: File 'mod_intkinds.mod' opened at (1) is not a GNU Fortran module file
make[3]: *** [mod_mppparam.o] Error 1
make[2]: *** [all-recursive] Error 1
make[1]: *** [all-recursive] Error 1
make: *** [all] Error 2

Related

Make failed : make: *** [sub-corelib-install_subtargets-ordered] Error 2

I am using the Ubuntu 14.04 in virtual box and 64 bit OS
I try to cross compile Qt-everywhere 4.8.6 with a 'gcc-linaro-arm-linux-gnueabihf-4.7' cross compiler and get the following error while doing the 'make'
make[1]: Entering directory `/home/user/qt-everywhere-opensource-src-4.8.6
/src/corelib'
/usr/local/linaro/bin/arm-linux-gnueabihf-gcc (The path depends where the Toolchain has been installed) -c -pipe -O3 -march=armv7-a -mtune=cortex-a8 -mfpu=neon -mfloat-abi=hard -fvisibility=hidden -Wall -W -D_REENTRANT -fPIC -DQT_BUILD_CORE_LIB -DQT_NO_USING_NAMESPACE -DQT_NO_CAST_TO_ASCII -DQT_ASCII_CAST_WARNINGS -DQT_MOC_COMPAT -DQT_USE_QSTRINGBUILDER -DHB_EXPORT=Q_CORE_EXPORT -DQT_NO_DEBUG -I../../mkspecs/qws/linux-arm-linaro-g++ -I. -I../../include -I../../include/QtCore -I.rcc/release-static-emb-arm -Iglobal -I../3rdparty/zlib -I../3rdparty/harfbuzz/src -I../3rdparty/md5 -I../3rdparty/md4 -I.moc/release-static-emb-arm -o .obj/release-static-emb-arm/adler32.o ../3rdparty/zlib/adler32.c
/bin/sh: 1: Syntax error: word unexpected (expecting ")")
make[1]: *** [.obj/release-static-emb-arm/adler32.o] Error 2
make[1]: Leaving directory `/home/user/qt-everywhere-opensource-src-4.8.6/src/corelib'
make: *** [sub-corelib-install_subtargets-ordered] Error 2
The .configure script has no problems
Can anyone help out, what causes this?
This text doesn't belong in your call to gcc:
(The path depends where the Toolchain has been installed)
Remove that to get rid of the error.

Error compiling SOSlib C library

I am attempting to compile a library,
http://www.tbi.univie.ac.at/~raim/odeSolver/
this one specifically, I have gotten the necessary libraries for this.
However whenever i attempt to compile it with "make", I get the following error.
Making all in src
make[1]: Entering directory `/home/user/SOSLib/buildSOSlib/src'
/usr/bin/make all-am
make[2]: Entering directory `/home/user/SOSLib/buildSOSlib/src'
/bin/bash ../libtool --tag=CC --mode=link /usr/bin/gcc-4.8 -Wno-unknown-pragmas -Wall -Wextra -ansi -std=iso9899:1990 -g3 -gdwarf-2 -no-undefined -L/usr/lib64 -L/usr/local/lib -o libODES.la -rpath /usr/local/lib ASTIndexNameNode.lo arithmeticCompiler.lo charBuffer.lo compiler.lo cvodeData.lo cvodeSolver.lo daeSolver.lo drawGraph.lo evaluateAST.lo integratorInstance.lo integratorSettings.lo interpol.lo modelSimplify.lo nullSolver.lo odeConstruct.lo odeModel.lo odeSolver.lo processAST.lo sbml.lo sbmlResults.lo sensSolver.lo solverError.lo util.lo data.lo error.lo -lsbml -lxml2 -lsundials_ida -lsundials_kinsol -lsundials_cvodes -lsundials_nvecserial -lm -lm -ldl
libtool: link: /usr/bin/gcc-4.8 -shared -fPIC -DPIC .libs/ASTIndexNameNode.o .libs/arithmeticCompiler.o .libs/charBuffer.o .libs/compiler.o .libs/cvodeData.o .libs/cvodeSolver.o .libs/daeSolver.o .libs/drawGraph.o .libs/evaluateAST.o .libs/integratorInstance.o .libs/integratorSettings.o .libs/interpol.o .libs/modelSimplify.o .libs/nullSolver.o .libs/odeConstruct.o .libs/odeModel.o .libs/odeSolver.o .libs/processAST.o .libs/sbml.o .libs/sbmlResults.o .libs/sensSolver.o .libs/solverError.o .libs/util.o .libs/data.o .libs/error.o -L/usr/lib64 -L/usr/local/lib -lsbml -lxml2 /usr/local/lib/libsundials_ida.a /usr/local/lib/libsundials_kinsol.a /usr/local/lib/libsundials_cvodes.a /usr/local/lib/libsundials_nvecserial.a -lm -ldl -Wl,-soname -Wl,libODES.so.0 -o .libs/libODES.so.0.0.0
/usr/bin/ld: /usr/local/lib/libsundials_ida.a(ida.o): relocation R_X86_64_32 against `.rodata' can not be used when making a shared object; recompile with -fPIC
/usr/local/lib/libsundials_ida.a: error adding symbols: Bad value
collect2: error: ld returned 1 exit status
make[2]: *** [libODES.la] Error 1
make[2]: Leaving directory `/home/user/SOSLib/buildSOSlib/src'
make[1]: *** [all] Error 2
make[1]: Leaving directory `/home/user/SOSLib/buildSOSlib/src'
make: *** [all-recursive] Error 1
What is happening here?
You are trying to build a shared library, and shared libraries must be built as position-independent code so they an be loaded and run anywhere in memory. This is achieved passing the -fPIC flag to GCC. It seems that one of the libraries (libsundials_ida.a) was not built with it.

Cross compiling NodeJS for Windows CE on ARMv11

I'm trying to cross compile NodeJS for Windows CE and I can't seem to figure it out. We'd like to run Node on devices using Freescale ARM1136-MX35 processors.
I've tried using cegcc but to no avail, and I've also tried configuring using: ./configure --without-npm --without-ssl --without-snapshot --dest-cpu=arm --dest-os=win, but there were just too many errors. Has anyone had any success compiling Node for Windows CE?
Here's the error I get using the normal gcc:
root#kevin-vm:~/node-v0.10.26# make
make -C out BUILDTYPE=Release V=1
make[1]: Entering directory `/root/node-v0.10.26/out'
g++ '-DNODE_WANT_INTERNALS=1' '-DARCH="arm"' '-DPLATFORM="linux"' '-DNODE_TAG=""' '-DHAVE_OPENSSL=0' '-DHAVE_ETW=1' '-DHAVE_PERFCTR=1' '-D__POSIX__' '-D_LARGEFILE_SOURCE' '-D_FILE_OFFSET_BITS=64' '-D_POSIX_C_SOURCE=200112' -I../src -I../tools/msvs/genfiles -I../deps/uv/src/ares -I/root/node-v0.10.26/out/Release/obj/gen -I../deps/v8/include -I../deps/zlib -I../deps/http_parser -I../deps/cares/include -I../deps/uv/include -Wall -Wextra -Wno-unused-parameter -pthread -O2 -fno-strict-aliasing -fno-tree-vrp -fno-omit-frame-pointer -fno-rtti -fno-exceptions -MMD -MF /root/node-v0.10.26/out/Release/.deps//root/node-v0.10.26/out/Release/obj.target/node/src/node.o.d.raw -c -o /root/node-v0.10.26/out/Release/obj.target/node/src/node.o ../src/node.cc
In file included from ../src/node_counters.h:36:0,
from ../src/node.cc:35:
../src/node_win32_perfctr_provider.h:33:8: error: ‘HANDLE’ does not name a type
../src/node_win32_perfctr_provider.h: In function ‘bool node::NODE_COUNTER_ENABLED()’:
../src/node_win32_perfctr_provider.h:35:45: error: ‘NodeCounterProvider’ was not declared in this scope
make[1]: *** [/root/node-v0.10.26/out/Release/obj.target/node/src/node.o] Error 1
make[1]: Leaving directory `/root/node-v0.10.26/out'
make: *** [node] Error 2
Using cegcc:
root#kevin-vm:~/node-v0.10.26# make
/usr/bin/python tools/gyp_node.py -f make
make -C out BUILDTYPE=Release V=1
make[1]: Entering directory `/root/node-v0.10.26/out'
arm-cegcc-gcc '-D_DARWIN_USE_64_BIT_INODE=1' '-D_LARGEFILE_SOURCE' '-D_FILE_OFFSET_BITS=64' '-D_GNU_SOURCE' '-DHAVE_CONFIG_H' '-DCARES_STATICLIB' -I../deps/cares/include -I../deps/cares/src -I../deps/cares/config/linux -Wall -Wextra -Wno-unused-parameter -pthread -g --std=gnu89 -pedantic -Wall -Wextra -Wno-unused-parameter -O2 -fno-strict-aliasing -fno-tree-vrp -fno-tree-sink -fno-omit-frame-pointer -MMD -MF /root/node-v0.10.26/out/Release/.deps//root/node-v0.10.26/out/Release/obj.target/cares/deps/cares/src/ares_cancel.o.d.raw -c -o /root/node-v0.10.26/out/Release/obj.target/cares/deps/cares/src/ares_cancel.o ../deps/cares/src/ares_cancel.c
arm-cegcc-gcc: unrecognized option '-pthread'
/bin/../libexec/gcc/arm-cegcc/4.4.0/cc1: error while loading shared libraries: libmpfr.so.1: cannot open shared object file: No such file or directory
make[1]: *** [/root/node-v0.10.26/out/Release/obj.target/cares/deps/cares/src/ares_cancel.o] Error 1
make[1]: Leaving directory `/root/node-v0.10.26/out'
make: *** [node] Error 2
Edit:
Our company decided to stop using Windows CE products and switched to embedded Linux systems (ARMv6) and it runs 0.12.2 just fine on there.

how to resolve this error -- while compiling socketcan utilities

I have downloaded from SVN can utilities. Because by default can utitlities are not in kernel.
svn checkout svn://svn.berlios.de/socketcan/trunk/can-utils
Kernel i am using is :--
ignite#ignite:~/socketcan/can-utils$ uname -a
Linux ignite 3.5.0-17-generic #28-Ubuntu SMP Tue Oct 9 19:32:08 UTC 2012 i686 i686 i686 GNU/Linux
Then i recompiled the utitilities. Here is the error isotp.h not found :---
ignite#ignite:~/socketcan/can-utils$ make all
cc -O2 -Wall -Wno-parentheses -I../kernel/2.6/include -fno-strict-aliasing -DSO_RXQ_OVFL=40 -DPF_CAN=29 -DAF_CAN=PF_CAN isotprecv.c -o isotprecv
isotprecv.c:60:29: fatal error: linux/can/isotp.h: No such file or directory
compilation terminated.
make: *** [isotprecv] Error 1
cc -O2 -Wall -Wno-parentheses -I../kernel/2.6/include -fno-strict-aliasing -DSO_RXQ_OVFL=40 -DPF_CAN=29 -DAF_CAN=PF_CAN isotpsend.c -o isotpsend
isotpsend.c:60:29: fatal error: linux/can/isotp.h: No such file or directory
compilation terminated.
make: *** [isotpsend] Error 1
cc -O2 -Wall -Wno-parentheses -I../kernel/2.6/include -fno-strict-aliasing -DSO_RXQ_OVFL=40 -DPF_CAN=29 -DAF_CAN=PF_CAN isotpsniffer.c -o isotpsniffer
isotpsniffer.c:61:29: fatal error: linux/can/isotp.h: No such file or directory
compilation terminated.
make: *** [isotpsniffer] Error 1
cc -O2 -Wall -Wno-parentheses -I../kernel/2.6/include -fno-strict-aliasing -DSO_RXQ_OVFL=40 -DPF_CAN=29 -DAF_CAN=PF_CAN isotptun.c -o isotptun
isotptun.c:69:29: fatal error: linux/can/isotp.h: No such file or directory
compilation terminated.
make: *** [isotptun] Error 1
cc -O2 -Wall -Wno-parentheses -I../kernel/2.6/include -fno-strict-aliasing -DSO_RXQ_OVFL=40 -DPF_CAN=29 -DAF_CAN=PF_CAN isotpserver.c -o isotpserver
isotpserver.c:80:29: fatal error: linux/can/isotp.h: No such file or directory
compilation terminated.
make: *** [isotpserver] Error 1
make: Target `all' not remade because of errors.
Clone the latest can-utils repository:
git clone https://github.com/linux-can/can-utils.git
cd can-utils
./autogen.sh
./configure
make
make install

Is it necessary to upgrade Glib in Cygwin?

I'm attempting to compile abiword in my Cygwin environment.
I have cygwin 1.7.25.
The compile fails regarding glib:
libtool: compile: gcc -DHAVE_CONFIG_H -I. -I.. -D_REENTRANT -I/usr/include/fribidi -
I/usr/include/glib-2.0 -I/usr/lib/glib-2.0/include -I/usr/include/libgsf-1 -I/usr/include/libxml2
-I/usr/include/wv -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/pixman-1 -
I/usr/include/libpng15 -I/usr/include/pango-1.0 -I/usr/include/harfbuzz -I/usr/include/gtk-2.0 -
I/usr/lib/gtk-2.0/include -I/usr/include/atk-1.0 -I/usr/include/gdk-pixbuf-2.0 -
I/usr/include/gio-unix-2.0/ -I/usr/include/gtk-unix-print-2.0 -I/usr/include/librsvg-2.0 -Wall -
Wextra -Wsign-compare -Wpointer-arith -Wchar-subscripts -Wwrite-strings -Wmissing-noreturn -
Wunused -Wpointer-arith -Wshadow -g -O2 -MT go-cmd-context.lo -MD -MP -MF .deps/go-cmd-
context.Tpo -c goffice/app/go-cmd-context.c -DDLL_EXPORT -DPIC -o .libs/go-cmd-context.o
In file included from ./goffice/app/goffice-app.h:25:0,
from ./goffice/app/go-cmd-context.h:24,
from goffice/app/go-cmd-context-impl.h:4,
from goffice/app/go-cmd-context.c:10:
/usr/include/glib-2.0/glib/gmacros.h:35:2: error: #error "Only <glib.h> can be included directly."
goffice/app/go-cmd-context.c: In function ‘go_cmd_context_get_type’:
goffice/app/go-cmd-context.c:147:3: warning: missing initializer [-Wmissing-field-initializers]
goffice/app/go-cmd-context.c:147:3: warning: (near initialization for ‘go_cmd_context_info.class_init’) [-Wmissing-field-initializers]
Makefile:503: recipe for target `go-cmd-context.lo' failed
make[3]: *** [go-cmd-context.lo] Error 1
make[3]: Leaving directory `/home/kingram/src/abiword-2.8.6/goffice-bits'
Makefile:409: recipe for target `all' failed
make[2]: *** [all] Error 2
make[2]: Leaving directory `/home/kingram/src/abiword-2.8.6/goffice-bits'
Makefile:670: recipe for target `all-recursive' failed
make[1]: *** [all-recursive] Error 1
make[1]: Leaving directory `/home/kingram/src/abiword-2.8.6'
Makefile:473: recipe for target `all' failed
make: *** [all] Error 2
A google search produced a Redhat bug report suggesting that Glib 2.31 is required.
I'm considering downloading and compiling the latest glib from source as cygwin does not appear to be using it.
However, I'd like some insight on this choice or hear if there are some other experiences around this.
Actually, Glib 2.31 is the culprit; its headers changed so that only the top-level headers may be #included, not the individual class headers.
Cygwin does have the latest stable branch of Glib.
Therefore, in order to get this to compile, you would need to fix the #includes in the code, as indicated in the error messages.
However, I can save you the trouble: Abiword packages are available from Cygwin Ports.

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