I am trying to install the scipy library with python3 -m pip install --user --no-use-pep517 scipy but I am receiving the following error:
ERROR: Failed building wheel for scipy
Running setup.py clean for scipy
ERROR: Command errored out with exit status 1:
command: /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-spokr6ic/scipy/setup.py'"'"'; __file__='"'"'/tmp/pip-install-spokr6ic/scipy/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' clean --all
cwd: /tmp/pip-install-spokr6ic/scipy
I am using that code to install because pip3 install scipy is giving me this error:
ERROR: Failed building wheel for scipy
Failed to build scipy
ERROR: Could not build wheels for scipy which use PEP 517 and cannot be installed directly
How can I resolve this issue?
Python == 3.7.3
PS:The complete traceback is 414 lines. I don't know if I should include here.
Try this:
sudo apt update
sudo apt install -y python3-scipy
Related
I am trying to install fitsne in colab. Recommended way for installation is:
conda config --add channels conda-forge #if not already in your channels. Needed for fftw.
conda install cython numpy fftw
pip install fitsne
Yet, I get following error:
Requirement already satisfied: numpy in /usr/local/lib/python3.7/dist-packages (from fitsne) (1.19.5)
Requirement already satisfied: cython in /usr/local/lib/python3.7/dist-packages (from fitsne) (0.29.22)
Building wheels for collected packages: fitsne
Building wheel for fitsne (setup.py) ... error
ERROR: Failed building wheel for fitsne
Running setup.py clean for fitsne
Failed to build fitsne
Installing collected packages: fitsne
Running setup.py install for fitsne ... error
ERROR: Command errored out with exit status 1: /usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-ezkx1s2e/fitsne/setup.py'"'"'; __file__='"'"'/tmp/pip-install-ezkx1s2e/fitsne/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /tmp/pip-record-uzkyz06_/install-record.txt --single-version-externally-managed --compile Check the logs for full command output.
Can someone please explain how to fix such an error in colab?
I solved it using this gist
!git clone https://github.com/KlugerLab/FIt-SNE.git
!wget http://www.fftw.org/fftw-3.3.8.tar.gz
!tar -xf fftw-3.3.8.tar.gz
!cd fftw-3.3.8
!./fftw-3.3.8/configure
!make
!make install
!g++ -std=c++11 -O3 FIt-SNE/src/sptree.cpp FIt-SNE/src/tsne.cpp FIt-SNE/src/nbodyfft.cpp -o FIt-SNE/bin/fast_tsne -pthread -lfftw3 -lm -Wno-address-of-packed-member
import sys; sys.path.append('FIt-SNE/')
from fast_tsne import fast_tsne
I am trying to install Dagster and Dagit using:python3 -m pip install dagster dagit --user
But, Always when it starts to build wheel for grpcio, it throws an error and stops the installation.
ERROR: Command errored out with exit status 1: /Library/Developer/CommandLineTools/usr/bin/python3 -u -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/cb/vkzjvbbn2l5gbb31y3m61d_40000gp/T/pip-install-3005iws8/grpcio/setup.py'"'"'; __file__='"'"'/private/var/folders/cb/vkzjvbbn2l5gbb31y3m61d_40000gp/T/pip-install-3005iws8/grpcio/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' install --record /private/var/folders/cb/vkzjvbbn2l5gbb31y3m61d_40000gp/T/pip-record-8m4mi_rs/install-record.txt --single-version-externally-managed --compile --user --prefix= Check the logs for full command output.
Is anyone using Dagster and Dagit on Mac?
EDIT: I was able to install Dagster by providing the required version in my requirements.txt File.
Upgraded the Pip to the latest version bypython3 -m pip install --user --upgrade pip and then installed Dagster!
It worked.
The main installation steps for Dagster are outlined here: https://docs.dagster.io/getting-started/install#installation - however users with M1 Macs have run into issues recently (early 2023) related to grpcio package installation.
If you encounter that issue, you will need this command:
pip install dagster dagit --find-links=https://github.com/dagster-io/build-grpcio/wiki/Wheels
I used python3 -m pip install pygame==2.0.0 via non-rosetta terminal and got these errors:
ERROR: Command errored out with exit status 1:
command: /opt/homebrew/opt/python#3.9/bin/python3.9 -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/1q/4hfh5j_d715b0vm49lql6vl80000gn/T/pip-install-cqq2oily/pygame_3a311b7a5339480eb6bae08f88ff3fe6/setup.py'"'"'; __file__='"'"'/private/var/folders/1q/4hfh5j_d715b0vm49lql6vl80000gn/T/pip-install-cqq2oily/pygame_3a311b7a5339480eb6bae08f88ff3fe6/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base /private/var/folders/1q/4hfh5j_d715b0vm49lql6vl80000gn/T/pip-pip-egg-info-ig7pjjbc
cwd: /private/var/folders/1q/4hfh5j_d715b0vm49lql6vl80000gn/T/pip-install-cqq2oily/pygame_3a311b7a5339480eb6bae08f88ff3fe6/
ERROR: Could not find a version that satisfies the requirement pygame==2.0.0
ERROR: No matching distribution found for pygame==2.0.0
My homebrew, pip3 are all up to date.
Any help would be appreciated!
I already had the same problem: the pip module only detected a pygame version older than 2.0.0.
It always installed pygame 1.9.6.
Maybe you should:
1. Upgrade pip
I don't know how pip works, but I updated it by typing
python3 -m pip install --upgrade pip
Then, when I typed again
python3 -m pip install pygame
pip downloaded the 2.0.1 version of pygame correctly.
2. Check your internet connection
Of course the modules come from Internet.
How can I install matplotlib with pip. I have try to use pip install or install from source
I have python 3.9 beta version btw
git clone git#github.com:matplotlib/matplotlib.git
cd matplotlib
python -mpip install .
but I get the following error
$pip install matplotlib
Collecting matplotlib
Using cached matplotlib-3.3.2.tar.gz (37.9 MB)
ERROR: Command errored out with exit status 1:
command: /Users/a/.pyenv/versions/3.9.0b5/bin/python3.9 -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/k0/3v16x2k52tdf00j6tpm7wffc0000gp/T/pip-install-vq_esy_g/matplotlib/setup.py'"'"'; __file__='"'"'/private/var/folders/k0/3v16x2k52tdf00j6tpm7wffc0000gp/T/pip-install-vq_esy_g/matplotlib/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base /private/var/folders/k0/3v16x2k52tdf00j6tpm7wffc0000gp/T/pip-pip-egg-info-ny9shc_k
cwd: /private/var/folders/k0/3v16x2k52tdf00j6tpm7wffc0000gp/T/pip-install-vq_esy_g/matplotlib/
Complete output (63 lines):
WARNING: The wheel package is not available.
Edit setup.cfg to change the build options; suppress output with --quiet.
BUILDING MATPLOTLIB
matplotlib: yes [3.3.2]
python: yes [3.9.0b5 (default, Oct 2 2020, 00:38:55) [Clang 11.0.3
(clang-1103.0.32.29)]]
platform: yes [darwin]
sample_data: yes [installing]
tests: no [skipping due to configuration]
macosx: yes [installing]
running egg_info
...
File "/private/var/folders/k0/3v16x2k52tdf00j6tpm7wffc0000gp/T/pip-install-vq_esy_g/matplotlib/setupext.py", line 469, in add_numpy_flags
import numpy as np
File "/private/var/folders/k0/3v16x2k52tdf00j6tpm7wffc0000gp/T/pip-install-vq_esy_g/matplotlib/.eggs/numpy-1.19.2-py3.9-macosx-10.15-x86_64.egg/numpy/__init__.py", line 286, in <module>
raise RuntimeError(msg)
RuntimeError: Polyfit sanity test emitted a warning, most likely due to using a buggy Accelerate backend. If you compiled yourself, see site.cfg.example for information. Otherwise report this to the vendor that provided NumPy.
RankWarning: Polyfit may be poorly conditioned
----------------------------------------
ERROR: Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.
Since your python version is 3.9 you can install matplotlib with pip3
pip3 install matplotlib
You can also try
python3 -m pip3 install -U matplotlib
Edit
You may not have installed the setup tools correctly, try :
pip install --upgrade setuptools
and then pip install matplotlib
I'm trying to install fbprophet using pip on windows10 and the following error is showed
ERROR: Command errored out with exit status 1: 'c:\program
files\python37\python.exe' -u -c 'import sys, setuptools, tokenize;
sys.argv[0] =
'"'"'C:\Users\ARJUNS~1\AppData\Local\Temp\pip-install-v9k4x_8v\fbprophet\setup.py'"'"';
file='"'"'C:\Users\ARJUNS~1\AppData\Local\Temp\pip-install-v9k4x_8v\fbprophet\setup.py'"'"';f=getattr(tokenize,
'"'"'open'"'"', open)(file);code=f.read().replace('"'"'\r\n'"'"',
'"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))'
install --record
'C:\Users\ARJUNS~1\AppData\Local\Temp\pip-record-pjkjdpel\install-record.txt'
--single-version-externally-managed --compile Check the logs for full command output.
I have the pystan packet already installed
I had faced same problem. I used "conda" rather than "pip" for installation with steps shown below and it worked magical for me.
step 1: conda install -c anaconda ephem
step 2:conda install -c conda-forge pystan
step 3: conda install -c conda-forge fbprophet
Now you can go ahead with : "from fbprophet import Prophet" in python environment.