I'm coding a C++ library on Linux, the lib name is libic. libic use openssl. When I build libic on host Ubuntu 18.04, no error occurs. But when I cross-compile libic for arm, linker error when building libic shared target. The error is like below:
....
[100%] Linking CXX shared library libic.so
uclient.c:(.text+0xd96): undefined reference to `event_del'
uclient.c:(.text+0xd9e): undefined reference to `event_free'
uclient.c:(.text+0xdae): undefined reference to `event_del'
uclient.c:(.text+0xdb6): undefined reference to `event_free'
uclient.c:(.text+0xdf8): undefined reference to `SSL_get_shutdown'
uclient.c:(.text+0xe0a): undefined reference to `SSL_free'
uclient.c:(.text+0xe5c): undefined reference to `SSL_free'
uclient.c:(.text+0xe90): undefined reference to `event_base_free'
uclient.c:(.text+0xe98): undefined reference to `pthread_cancel'
uclient.c:(.text+0xed6): undefined reference to `SSL_get_shutdown'
uclient.c:(.text+0xefa): undefined reference to `SSL_set_shutdown'
uclient.c:(.text+0xf06): undefined reference to `SSL_shutdown'
uclient.c:(.text+0xf12): undefined reference to `SSL_set_shutdown'
uclient.c:(.text+0xf1a): undefined reference to `SSL_shutdown'
The configure log is below
-- Found PkgConfig: /usr/bin/pkg-config (found version "0.29.1")
-- Looking for pthread.h
-- Looking for pthread.h - found
-- Looking for pthread_create
-- Looking for pthread_create - not found
-- Check if compiler accepts -pthread
-- Check if compiler accepts -pthread - yes
-- Found Threads: TRUE
-- Found OpenSSL: /home/drone/tizen-studio/platforms/tizen-3.0/mobile/rootstraps/mobile-3.0-device.core/usr/lib/libcrypto.so (found version "1.0.2k")
-- Using OpenSSL 1.0.2k
-- Found CURL: /home/drone/tizen-studio/platforms/tizen-3.0/mobile/rootstraps/mobile-3.0-device.core/usr/lib/libcurl.so (found version "7.50.2")
--
-- C/C++:
-- C++ Compiler: /home/drone/Downloads/gcc-linaro-7.3.1-2018.05-x86_64_arm-linux-gnueabi/bin/arm-linux-gnueabi-g++ (ver 7.3.1)
-- C++ flags (Release): -mthumb -fdata-sections -Wa,--noexecstack -fsigned-char -Wno-psabi -std=c++1y -fPIC -O3 -DNDEBUG
-- C++ flags (Debug): -mthumb -fdata-sections -Wa,--noexecstack -fsigned-char -Wno-psabi -std=c++1y -fPIC -g
-- C Compiler: /home/drone/Downloads/gcc-linaro-7.3.1-2018.05-x86_64_arm-linux-gnueabi/bin/arm-linux-gnueabi-gcc
-- C flags (Release): -mthumb -fdata-sections -Wa,--noexecstack -fsigned-char -Wno-psabi -fPIC -O3 -DNDEBUG
-- C flags (Debug): -mthumb -fdata-sections -Wa,--noexecstack -fsigned-char -Wno-psabi -fPIC -g
-- CMAKE_INSTALL_PREFIX: /home/drake/Documents/code/libscs/packages/libscs
-- Linker flags (Release): -Wl,--fix-cortex-a8 -Wl,--no-undefined -Wl,--gc-sections -Wl,-z,noexecstack -Wl,-z,relro -Wl,-z,now
-- Linker flags (Debug): -Wl,--fix-cortex-a8 -Wl,--no-undefined -Wl,--gc-sections -Wl,-z,noexecstack -Wl,-z,relro -Wl,-z,now
It seems with cross compile, libic requires to link with openssl. I want to ask that how can I build libic shared without linking with openssl?
Thanks for your support.
If your library depends on libssl, you cannot compile it without linking to libssl. Did you try getting the libssl package for the arm architecture? Off the top of my head, something around the lines of
dpkg --add-architecture arm
apt update
apt install libssl-dev:arm
Or maybe
dpkg --add-architecture arm64
apt update
apt install libssl-dev:arm64
Hope this helps!
Thank you guys, I've found the answer, the linker issue occurs because of this linker flag -Wl,--no-undefined. Just remove this linker option is OK
Related
I am trying to cross compile Boost, but I ended up with the following errors.
I have done the following steps:
Unzipped boost_1_68_0.tar.bz2
Executed Bootstrap
Edited user-config.jam using
gcc:arm:arm-fslc-linux-gnueabi-g++
Executed ./b2 --prefix=install toolset=gcc-arm --user-config=./user-config.jam
also exceuted ./bjam --prefix=install toolset=gcc-arm --user-config=./user-config.jam
But I ended up with the following error:
"arm-fslc-linux-gnueabi-g++" -fPIC -pthread -O3 -finline-functions -Wno-inline -Wall -DBOOST_ALL_DYN_LINK=1 -DBOOST_ALL_NO_LIB=1 -DNDEBUG -I"." -c -o "bin.v2/libs/wave/build/gcc-arm/release/threading-multi/cpplexer/re2clex/aq.o" "libs/wave/src/cpplexer/re2clex/aq.cpp"
...failed gcc.compile.c++ bin.v2/libs/wave/build/gcc-arm/release/threading-multi/cpplexer/re2clex/aq.o...
gcc.compile.c++ bin.v2/libs/wave/build/gcc-arm/release/threading-multi/cpplexer/re2clex/cpp_re.o
libs/wave/src/cpplexer/re2clex/cpp_re.cpp:20:10: fatal error: ctime: No such file or directory
#include <ctime>
^~~~~~~
compilation terminated.
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
There are a lot of errors like these.
The problem is with the sysroot. We have to pass sysroot also with the compiler:
gcc : arm : arm-fslc-linux-gnueabi-g++ -march=armv7-a -mthumb -mfpu=neon -mfloat-abi=hard --sysroot=/opt/iotgw-sdk-prod/sysroots/armv7at2hf-neon-fslc-linux-gnueabi
Note: The blank spaces should tabs, not spaces.
I have installed (GCC) 4.7.2 20121015 (Red Hat 4.7.2-5) already and jave also installed yum install gcc-gfortran . (Package gcc-gfortran-4.4.7-18.el6.x86_64)
But I'm getting error like :
/usr/bin/ld: cannot find -lgfortran
collect2: error: ld returned 1 exit status
make: *** [quadprog.so] Error 1
Please help me in installing -lgfortran. It seems like I need to install "Fortran -dev package providing the Fortran library". I do not know how to do that in RedHat/CentOS. Please help. I'm facing hard time in doing this.
I have tried installing libgfortran using:
yum install libgfortran
But it says:
Package libgfortran-4.4.7-18.el6.x86_64 already installed and latest version
Nothing to do
(Running in an interactive session, skipping clean step.)
More Info:
I tried installing package quadprog for R and below are the logs:
install.packages('https://cran.cnr.berkeley.edu/src/contrib/quadprog_1.5-5.tar.gz',dependencies = TRUE,repos = NULL,type ="source")
Installing package into '/usr/lib64/R/library'
(as 'lib' is unspecified)
trying URL 'https://cran.cnr.berkeley.edu/src/contrib/quadprog_1.5-5.tar.gz'
Content type 'application/x-gzip' length 33651 bytes (32 KB)
==================================================
downloaded 32 KB
* installing *source* package 'quadprog' ...
** package 'quadprog' successfully unpacked and MD5 sums checked
** libs
gfortran -m64 -fvisibility=hidden -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/lib64/gfortran/modules -c aind.f -o aind.o
gcc -m64 -std=gnu99 -I/usr/include/R -DNDEBUG -I/usr/local/include -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -fpic -fPIC -c init.c -o init.o
gfortran -m64 -fvisibility=hidden -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/lib64/gfortran/modules -ffloat-store -c -o solve.QP.compact.o solve.QP.compact.f
solve.QP.compact.f:254.3:
72 if (nvl .EQ. 0) then
1
Warning: Label 72 at (1) defined but not used
solve.QP.compact.f:302.2:
7 t1inf = .FALSE.
1
Warning: Label 7 at (1) defined but not used
solve.QP.compact.f: In function 'qpgen1':
solve.QP.compact.f:94: warning: 'it1' may be used uninitialized in this function
solve.QP.compact.f:98: warning: 't1' may be used uninitialized in this function
gfortran -m64 -fvisibility=hidden -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/lib64/gfortran/modules -ffloat-store -c -o solve.QP.o solve.QP.f
solve.QP.f:245.3:
72 if (nvl .EQ. 0) then
1
Warning: Label 72 at (1) defined but not used
solve.QP.f:293.2:
7 t1inf = .FALSE.
1
Warning: Label 7 at (1) defined but not used
solve.QP.f: In function 'qpgen2':
solve.QP.f:85: warning: 'it1' may be used uninitialized in this function
solve.QP.f:89: warning: 't1' may be used uninitialized in this function
gfortran -m64 -fvisibility=hidden -fpic -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -I/usr/lib64/gfortran/modules -c util.f -o util.o
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -o quadprog.so aind.o init.o solve.QP.compact.o solve.QP.o util.o -L/usr/lib64/R/lib -lRblas -lgfortran -lm -lgfortran -lm -L/usr/lib64/R/lib -lR
/usr/bin/ld: cannot find -lgfortran
collect2: error: ld returned 1 exit status
make: *** [quadprog.so] Error 1
ERROR: compilation failed for package 'quadprog'
* removing '/usr/lib64/R/library/quadprog'
Warning message:
In install.packages("https://cran.cnr.berkeley.edu/src/contrib/quadprog_1.5-5.tar.gz", :
installation of package '/tmp/Rtmpry5XTG/downloaded_packages/quadprog_1.5-5.tar.gz' had non-zero exit status
Edits :
bash-4.1# rpm -ql libgfortran
/usr/lib64/libgfortran.so.3
/usr/lib64/libgfortran.so.3.0.0
You showed us this:
# type -a gcc
gcc is /opt/centos/devtoolset-1.1/root/usr/bin/gcc
gcc is /usr/bin/gcc'
It means that you have installed Red Hat Developer Toolset and enabled it for this shell, using scl enable or a similar command. Do you still need it? If not, I suggest to disable it.
If you need DTS, you will have to install the Fortran compiler from DTS 1.1, using:
yum install devtoolset-1.1-gcc-gfortran
(Or download it directly from here, which seems to be the repository from where you got your DTS compiler.)
This will install the Fortran compiler which is compatible with the gcc compiler you have configured. Without that, the system Fortran compiler and the DTS gcc are used together, which does not work because the DTS gcc command (used for linking in the build process you quoted) is not able to locate the libgfortran.so library from the system Fortran compiler.
Alternatively, you can bring the two compilers into sync by deinstalling the DTS compiler:
yum install devtoolset-1.1-gcc-gfortran
The following compile line was looking for libgfortran at /usr/lib64/R/lib but the library is not there. Hence, the linker error.
gcc -m64 -std=gnu99 -shared -L/usr/lib64/R/lib -o quadprog.so aind.o init.o solve.QP.compact.o solve.QP.o util.o -L/usr/lib64/R/lib -lRblas -lgfortran -lm -lgfortran -lm -L/usr/lib64/R/lib -lR
As we could not locate and modify the makefile. We created a symbolic link /usr/lib64/R/lib/libgfortran.so to /usr/lib64/libgfortran.so.3 and rerun the installation steps and it resolves the linker error.
This is a work around that we follow which resolves the issue
I have a working Nitrogen6x board that runs on Yocto Krogoth-next build with core-image-sato. I have installed Qt Creator 3.5.1 (based on Qt 5.5.1) and I have added my kit for nitrogen6x board as per [Build & Install Qt5 toolchain] document. I have added a sample Qt Quick Application with component set chosen as Qt Quick 2.1 and tried to compile the source, I am noticing this below error.
19:04:25: Running steps for project untitled6...
19:04:25: Starting: "/opt/poky/2.1.1/sysroots/i686-pokysdk-linux/usr/bin/qt5/qmake" /home/test/untitled6/untitled6.pro -r -spec linux-g++
19:04:25: The process "/opt/poky/2.1.1/sysroots/i686-pokysdk-linux/usr/bin/qt5/qmake" exited normally.
19:04:25: Starting: "/usr/bin/make"
g++ -c -pipe -O2 -std=gnu++0x -Wall -W -D_REENTRANT -fPIC -DQT_NO_DEBUG -DQT_QUICK_LIB -DQT_GUI_LIB -DQT_QML_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -I../untitled6 -I. -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5 -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5/QtQuick -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5/QtGui -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5/QtQml -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5/QtNetwork -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5/QtCore -I. -I/opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/lib/qt5/mkspecs/linux-g++ -o main.o ../untitled6/main.cpp
/opt/poky/2.1.1/sysroots/i686-pokysdk-linux/usr/bin/qt5/rcc -name qml ../untitled6/qml.qrc -o qrc_qml.cpp
g++ -c -pipe -O2 -std=gnu++0x -Wall -W -D_REENTRANT -fPIC -DQT_NO_DEBUG -DQT_QUICK_LIB -DQT_GUI_LIB -DQT_QML_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -I../untitled6 -I. -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5 -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5/QtQuick -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5/QtGui -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5/QtQml -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5/QtNetwork -isystem /opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5/QtCore -I. -I/opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/lib/qt5/mkspecs/linux-g++ -o qrc_qml.o qrc_qml.cpp
g++ -Wl,-O1 -o untitled6 main.o qrc_qml.o -lQt5Quick -lQt5Gui -lQt5Qml -lQt5Network -lQt5Core -lGLESv2 -lpthread
/usr/bin/ld: cannot find -lQt5Quick
/usr/bin/ld: cannot find -lQt5Gui
/usr/bin/ld: cannot find -lQt5Qml
/usr/bin/ld: cannot find -lQt5Network
/usr/bin/ld: cannot find -lQt5Core
/usr/bin/ld: cannot find -lGLESv2
collect2: ld returned 1 exit status
make: *** [untitled6] Error 1
19:04:26: The process "/usr/bin/make" exited with code 2.
Error while building/deploying project untitled6 (kit: Nitrogen)
When executing step 'Make'
19:04:26: Elapsed time: 00:01.
All the Qt libraries are present under /sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/include/qt5/ and I have set the sysroot path correctly under my kit, but I am unable to figure out why is that my application is failing to reference those libraries. Any help on this is deeply appreciated. Thanks in advance.
The mkspec pointed to by your kit seem to be the wrong one (linux-g++), quoting from your build log
-I/opt/poky/2.1.1/sysroots/cortexa9hf-neon-poky-linux-gnueabi/usr/lib/qt5/mkspecs/linux-g++
When building for a nitrogen6x, it should likely be linux-oe-g++ instead. This is either set by default in the Qt version you selected, or can be set by modifying the Kit itself, in QtCreator's options, under "mkspec".
The error your's seeing is probably due to the fact the that the ABI & architecture of the libraries pointed are not compatible with the x86/64 code you compiled.
Also make sure to source Yocto's environment file before starting QtCreator if you encounter problems (namely compile error about "C" not found). This will setup the path to the cross-compiler. Example:
source /opt/poky/1.6.2/environment-setup-cortexa9hf-vfp-neon-poky-linux-gnueabi
~/Qt/Tools/QtCreator/bin/qtcreator
I'm trying to compile the PCL 1.8 and get the following error:
/usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_get_peer_certificate#OPENSSL_1.0.0'
/usr/lib/libvtkIO.so.5.10.1: undefined reference to `TIFFReadDirectory#LIBTIFF_4.0'
If i list the dependencies of /usr/lib/x86_64-linux-gnu/libpq.so.5 I get libssl.so.1.0.0 => /lib/x86_64-linux-gnu/libssl.so.1.0.0, which is readelf -h /lib/x86_64-linux-gnu/libssl.so.1.0.0 | grep Class\|File\|Machine':
Class: ELF64
Machine: Advanced Micro Devices X86-64
However, I seem to have more libpq versions installed:
/home/t/anaconda2/lib/libssl.so.1.0.0
/home/t/anaconda2/pkgs/openssl-1.0.2j-0/lib/libssl.so.1.0.0
/home/t/matlab/R2015a/bin/glnxa64/libssl.so.1.0.0
/lib/i386-linux-gnu/libssl.so.1.0.0
/lib/x86_64-linux-gnu/libssl.so.1.0.0
with /lib/i386-linux-gnu/libssl.so.1.0.0 being
Class: ELF32
Machine: Intel 80386
And:
[ 12%] Linking CXX executable ../../bin/pcl_convert_pcd_ascii_binary
cd /pcl/build/io/tools && /usr/bin/cmake -E cmake_link_script CMakeFiles/pcl_con
vert_pcd_ascii_binary.dir/link.txt --verbose=1
/usr/bin/c++ -std=c++11 -pthread -fopenmp -Wno-deprecated -O2 -g -DNDEB
UG CMakeFiles/pcl_convert_pcd_ascii_binary.dir/convert_pcd_ascii_binary.cpp.o
-o ../../bin/pcl_convert_pcd_ascii_binary -rdynamic -lboost_system -lboost_fil
esystem -lboost_thread -lboost_date_time -lboost_iostreams -lboost_chrono -lboos
t_atomic -lboost_regex -lpthread -lpthread -lm ../../lib/libpcl_io.so.1.8.0 ../.
./lib/libpcl_common.so.1.8.0 ../../lib/libpcl_io_ply.so.1.8.0 -lboost_system -lb
oost_filesystem -lboost_thread -lboost_date_time -lboost_iostreams -lboost_chron
o -lboost_atomic -lboost_regex -lpthread /usr/lib/libvtkGenericFiltering.so.5.10
.1 /usr/lib/libvtkGeovis.so.5.10.1 -lm /usr/lib/libvtkCharts.so.5.10.1 /usr/lib/
libvtkViews.so.5.10.1 /usr/lib/libvtkInfovis.so.5.10.1 /usr/lib/libvtkWidgets.so
.5.10.1 /usr/lib/libvtkVolumeRendering.so.5.10.1 /usr/lib/libvtkHybrid.so.5.10.1
/usr/lib/libvtkParallel.so.5.10.1 /usr/lib/libvtkRendering.so.5.10.1 /usr/lib/l
ibvtkImaging.so.5.10.1 /usr/lib/libvtkGraphics.so.5.10.1 /usr/lib/libvtkIO.so.5.
10.1 /usr/lib/libvtkFiltering.so.5.10.1 /usr/lib/libvtkCommon.so.5.10.1 -lm /usr
/lib/libvtksys.so.5.10.1 -ldl /anaconda2/lib/libpng.so /anaconda2/lib/libz.so -l
usb-1.0 -Wl,-rpath,/pcl/build/lib:/usr/lib/openmpi/lib:/anaconda2/lib: -Wl,-rpat
h-link,/usr/lib/openmpi/lib
//usr/lib/x86_64-linux-gnu/libpq.so.5: undefined reference to `SSL_get_peer_cert
ificate#OPENSSL_1.0.0'
Guess the /anaconda2/lib shouldn't be there?
How I can make sure that CMake links to the correct version (and remove the wrong version)?
I managed to compile it removing anaconda from the PATH, and changing all values having a path to anaconda to lib/x86_64-linux-gnu/ in cmake-gui
I had this problem but I to compile it removing anaconda from the PATH, and delete build file, then redo cmake, then make.
I need some help with a linker error I get during installation of an Rcpp package on a linux system where I don't have admin rights. In a nutshell, I get this error:
relocation R_X86_64_32 against `.rodata' can not be used when making a shared object; recompile with -fPIC
I have a file solve.cpp that uses external library interp2d, which in turn has a GSL dependency. I specify my dependencies via [[Rcpp::depends(RcppArmadillo,RcppGSL)]] and in the DESCRIPTION. My Makevars is like the one from the RcppGSL package, with the addition of the linterp2d flag:
PKG_CPPFLAGS = -W $(GSL_CFLAGS) $(LOCAL_INCLUDE)
PKG_LIBS += $(GSL_LIBS) $(LOCAL_LIBS) -linterp2d $(RCPP_LDFLAGS)
where I define the environement variables
export LOCAL_INCLUDE="-I/data/uctpfos/local/include/"
export LOCAL_LIBS="-L/data/uctpfos/local/lib/"
on the system.
I do R CMD INSTALL bkPackage and see:
g++ -I/cm/shared/apps/R/3.0.1/lib64/R/include -DNDEBUG -W -I/cm/shared/apps/gsl/1.15/include -I/data/uctpfos/local/include -fPIC -I/usr/local/include -I"/data/uctpfos/R/x86_64-unknown-linux-gnu-library/3.0/Rcpp/include" -I"/data/uctpfos/R/x86_64-unknown-linux-gnu-library/3.0/RcppArmadillo/include" -I"/data/uctpfos/R/x86_64-unknown-linux-gnu-library/3.0/RcppGSL/include" -fpic -O3 -fPIC -c RcppExports.cpp -o RcppExports.o
g++ -I/cm/shared/apps/R/3.0.1/lib64/R/include -DNDEBUG -W -I/cm/shared/apps/gsl/1.15/include -I/data/uctpfos/local/include -fPIC -I/usr/local/include -I"/data/uctpfos/R/x86_64-unknown-linux-gnu-library/3.0/Rcpp/include" -I"/data/uctpfos/R/x86_64-unknown-linux-gnu-library/3.0/RcppArmadillo/include" -I"/data/uctpfos/R/x86_64-unknown-linux-gnu-library/3.0/RcppGSL/include" -fpic -O3 -fPIC -c solve.cpp -o solve.o
The problems appears after that in the linking step:
g++ -shared -L/usr/local/lib64 -o bkPackage.so RcppExports.o solve.o -L/cm/shared/apps/gsl/1.15/lib -lgsl -lgslcblas -lm -L/data/uctpfos/local/lib -linterp2d -L/data/uctpfos/R/x86_64-unknown-linux-gnu-library/3.0/Rcpp/lib -lRcpp -Wl,-rpath,/data/uctpfos/R/x86_64-unknown-linux-gnu-library/3.0/Rcpp/lib
The error follows as:
/usr/bin/ld: /data/uctpfos/local/lib/libinterp2d.a(interp2d_spline.c.o): relocation R_X86_64_32 against `.rodata' can not be used when making a shared object; recompile with -fPIC
/data/uctpfos/local/lib/libinterp2d.a: could not read symbols: Bad value
As you can see I compiled this with -fPIC, so that can't be it.
It's complaining that libinterp2d.a was not compiled with -fPIC; are you sure that was also compiled with -fPIC on?
Also, it seems you both have -fpic and -fPIC in your flags; you probably just want -fPIC. I think R actually ensures that's on by default.