Spark Thrift server queuing up queries - apache-spark

When Parallel queries are hitting Spark Thrift server, in Spark UI --> JDBC/ODBC Server , it shows up all queries as started but all of them gets executed in a sequential manner
Here's the Thrift Server startup script---
start_thriftserver (){
sudo /usr/lib/spark/sbin/start-thriftserver.sh \
--master yarn \
--deploy-mode client \
--executor-memory 3200m \
--executor-cores 2 \
--driver-memory 4g \
--conf spark.dynamicAllocation.enabled=true \
--conf spark.shuffle.service.enabled=true \
--conf spark.serializer=org.apache.spark.serializer.KryoSerializer \
--conf spark.dynamicAllocation.schedulerBacklogTimeout=1s \
--conf spark.dynamicAllocation.minExecutors=50 \
--conf spark.executor.memoryOverhead=684

This is indeed a confusing topic.
spark.sql.hive.thriftServer.singleSession=false
Try this.
That said, I am a little sceptical on all this.

Related

Can we have multiple executors in Spark master local[*] deployment code client

I have a 1 node Hadoop Cluster, I am submitting a spark job like this
spark-submit \
--class com.compq.scriptRunning \
--master local[*] \
--deploy-mode client \
--num-executors 3 \
--executor-cores 4 \
--executor-memory 21g \
--driver-cores 2 \
--driver-memory 5g \
--conf "spark.local.dir=/data/spark_tmp" \
--conf "spark.sql.shuffle.partitions=2000" \
--conf "spark.sql.inMemoryColumnarStorage.compressed=true" \
--conf "spark.sql.autoBroadcastJoinThreshold=200000" \
--conf "spark.speculation=false" \
--conf "spark.hadoop.mapreduce.map.speculative=false" \
--conf "spark.hadoop.mapreduce.reduce.speculative=false" \
--conf "spark.ui.port=8099" \
.....
Though I define 3 executors, I see only 1 executor in spark UI page running all the time. Can we have multiple executors running in parallel with
--master local[*] \
--deploy-mode client \
Its a on-prem, plain open source hadoop flavor installed in the cluster.
I tried changing master local to local[*] and playing around with deployment modes still, I could see only 1 executor running in spark UI

MountVolume.Setup failed for volume "spark-conf-volume"

We are running Spark Cluster on Kubernetes. When we submited jobs as below, driver pod and executer pods were all up and running. However, the application failed to work as expected, the root cause we suspected is that it failed to find the source path as specified by parameter "py-files". As we witnessed, the driver pod has a warning MountVolume.Setup failed for volume "spark-conf-volume".
Would you please advise?
bin/spark-submit \
--master k8s://https://k8s-master-ip:6443 \
--deploy-mode cluster \
--name algo-vm \
--py-files hdfs://{our_ip}:9000/testdata/src.zip \
--conf spark.executor.instances=2 \
--conf spark.driver.port=10000 \
--conf spark.port.maxRetries=1 \
--conf spark.blockManager.port=20000 \
--conf spark.kubernetes.authenticate.driver.serviceAccountName=spark \
--conf spark.kubernetes.container.image.pullPolicy=Always \
--conf spark.kubernetes.pyspark.pythonVersion=3 \
--conf spark.kubernetes.container.image={our_ip}/sutpc/k8s-spark-242-entry/spark-py:1.0 \
--jars hdfs://hdfs-master-ip:9000/jar/spark-sql-kafka-0-10_2.11-2.4.5.jar,hdfs://{our_ip}:9000/jar/kafka-clients-0.11.0.2.jar \
hdfs://{our_ip}:9000/testdata/spark_main.py

How to submit PySpark job on Kubernetes (minikube) using spark-submit

I have a PySpark job present locally on my laptop. If I want to submit it on my minikube cluster using spark-submit, any idea how to pass the python file ?
I'm using following command, but it isn't working
./spark-submit \
--master k8s://https://192.168.64.6:8443 \
--deploy-mode cluster \
--name amazon-data-review \
--conf spark.kubernetes.namespace=jupyter \
--conf spark.executor.instances=1 \
--conf spark.kubernetes.driver.limit.cores=1 \
--conf spark.executor.cores=1 \
--conf spark.executor.memory=500m \
--conf spark.kubernetes.container.image=prateek/spark-ubuntu-2.4.5 \
--conf spark.kubernetes.authenticate.driver.serviceAccountName=spark \
--conf spark.kubernetes.container.image.pullPolicy=Always \
--conf spark.kubernetes.container.image.pullSecrets=dockerlogin \
--conf spark.eventLog.enabled=true \
--conf spark.eventLog.dir=s3a://prateek/spark-hs/ \
--conf spark.hadoop.fs.s3a.access.key=xxxxx \
--conf spark.hadoop.fs.s3a.secret.key=xxxxx \
--conf spark.hadoop.fs.s3a.impl=org.apache.hadoop.fs.s3a.S3AFileSystem \
--conf spark.hadoop.fs.s3a.fast.upload=true \
/Users/prateek/apache-spark/amazon_data_review.py
Getting following error -
python3: can't open file '/Users/prateek/apache-spark/amazon_data_review.py': [Errno 2] No such file or directory
Is it required to keep the file within the Docker image itself. Can't we run it locally by keeping it on laptop
Spark on Kubernetes doesn't support submitting locally stored files with spark-submit.
What you could do to make it work in cluster mode is to build Spark Docker image based on prateek/spark-ubuntu-2.4.5 with amazon_data_review.py put inside of it (eg using Docker COPY /Users/prateek/apache-spark/amazon_data_review.py /amazon_data_review.py statement).
Then just refer to it in the spark-submit command using local:// file system, eg.:
spark-submit \
--master ... \
--conf ... \
...
local:///amazon_data_review.py
The alternative is to store that file on http(s):// or hdfs://-like accessible location.
It's solved. Running it with client mode helped to run it
--deploy-mode client

Kubernetes sport submit in cluster mode --packages not working as expected

I am trying to submit a spark job to a kubernetes cluster in cluster mode from a client in the cluster with --packages attribute to enable dependencies are downloaded by driver and executer but it is not working. It refers to path on submitting client. ( kubectl proxyis on )
here it the the submit options
/usr/local/bin/spark-submit \
--verbose \
--master=k8s://http://127.0.0.1:8001 \
--deploy-mode cluster \
--class org.apache.spark.examples.SparkPi \
--conf spark.kubernetes.authenticate.driver.serviceAccountName=spark \
--conf spark.kubernetes.namespace=spark \
--conf spark.kubernetes.container.image= <...> \
--conf spark.executor.instances=2 \
--conf spark.kubernetes.pyspark.pythonVersion=3 \
--conf spark.kubernetes.driver.secretKeyRef.AWS_ACCESS_KEY_ID=datazone-s3-secret:AWS_ACCESS_KEY_ID \
--conf spark.kubernetes.driver.secretKeyRef.AWS_SECRET_ACCESS_KEY=datazone-s3-secret:AWS_SECRET_ACCESS_KEY \
--packages com.amazonaws:aws-java-sdk:1.7.4,org.apache.hadoop:hadoop-aws:2.7.3 \
s3.py 10
On the logs I can see that packages are referring my local file system.
Spark config:
(spark.kubernetes.namespace,spark)
(spark.jars,file:///Users/<my username>/.ivy2/jars/com.amazonaws_aws-java-sdk-1.7.4.jar,file:///Users/<my username>/.ivy2/jars/org.apache.hadoop_hadoop-aws-2.7.3.jar,file:///Users/<my username>/.ivy2/jars/joda-time_joda-time-2.10.5.jar, ....
Did someone face this problem?

java.lang.ClassNotFoundException: org.apache.spark.deploy.kubernetes.submit.Client

I am running a sample spark job in kubernetes cluster with following command:
bin/spark-submit \
--deploy-mode cluster \
--class org.apache.spark.examples.SparkPi \
--master k8s://https://XXXXX \
--kubernetes-namespace sidartha-spark-cluster \
--conf spark.executor.instances=2 \
--conf spark.app.name=spark-pi \
--conf spark.kubernetes.driver.docker.image=kubespark/spark-driver:v2.1.0-kubernetes-0.1.0-rc1 \
--conf spark.kubernetes.executor.docker.image=kubespark/spark-executor:v2.1.0-kubernetes-0.1.0-rc1 \
examples/jars/spark-examples_2.11-2.1.0-k8s-0.1.0-SNAPSHOT.jar 1000
I am building the spark from apache-spark-on-k8s
I am not able find the jar for org.apache.spark.deploy.kubernetes.submit.Client Class.
This issue is resolved. We need to build the spark/resource-manager/kubernetes from the source.

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