I am new in Keras. I want to implement a layer where not all the weights will update. For example, in the following code, I want the dilation layer will update in a way that some center weights are never updated. For say, the shape of each feature matrix (out of 1024) in the dilation layer is 448, 448 and a block of 8x8 at the center of all feature matrices will never be updated, i.e. the 8x8 block is a (non-trainable) mask to the feature matrices.
input_layer=Input(shape=(896,896,3))
new_layer = Conv2D(32, kernel_size=(3,3), padding="same", activation='relu', kernel_initializer='he_normal')(input_layer)
new_layer = MaxPooling2D(pool_size=(2, 2), strides=(2,2), padding='same', data_format=None)(new_layer)
new_layer = Conv2D(64, kernel_size=(3,3), padding='same', activation='relu', kernel_initializer='he_normal')(new_layer)
new_layer = Conv2D(1024, kernel_size=(7,7), dilation_rate=8, padding="same", activation='relu', kernel_initializer='he_normal', name='dialation')(new_layer)
new_layer = Conv2D(32, kernel_size=(1,1), padding="same", activation='relu', kernel_initializer='he_normal')(new_layer)
new_layer = Conv2D(32, kernel_size=(1,1), padding="same", activation='relu', kernel_initializer='he_normal')(new_layer)
model = Model(input_layer, new_layer)
I was trying with the Keras's custom layer [link], but it was difficult for me to understand. Anyone would please help.
UPDATE:
I added the following figure for a better understanding. The dilation layer contains 1024 features. I want the middle region of each feature to be non-trainable (static).
Use this mask for both cases:
mask = np.zeros((1,448,448,1))
mask[:,220:228,220:228] = 1
Replacing part of the feature
If you replace part of the feature with constant values, this means the feature will be static, but it will still participate in backpropagation (because weights will still be multiplied and summed for this part of the image and there is a connection)
constant = 0 (will annulate kernel, but not bias)
def replace(x):
return x*(1-mask) + constant*mask
#before the dilation layer
new_layer=Lambda(replace)(new_layer)
Keeping the feature value, but stopping backpropagation
Here, the weights of the dilation layer and further will be updated normally, but the weights before the dilation layer will not receive the influence of the central region.
def stopBackprop(x):
stopped=K.stop_gradients(x)
return x*(1-mask) + stopped*mask
#before the dilation layer
new_layer=Lambda(stopBackprop)(new_layer)
I am working on clustering weights and then freezing specific clusters and train the network.
I am trying to freeze the specific weights in this network using the above example. But I'm not sure how to set the shape of the mask and custom layer in run_certain_weights().
This is the code I'm using:
from keras.layers import Dense, Flatten, Lambda
from keras.utils import to_categorical
from keras.models import Sequential, load_model
from keras.datasets import mnist
from keras.losses import categorical_crossentropy
from keras.backend import stop_gradient
import numpy as np
def load_data():
(x_train, y_train), (x_test, y_test) = mnist.load_data()
x_train = x_train.astype('float32')
x_test = x_test.astype('float32')
x_train /= 255
x_test /= 255
y_train = to_categorical(y_train, num_classes=10)
y_test = to_categorical(y_test, num_classes=10)
return x_train, y_train, x_test, y_test
def run():
x_train, y_train, x_test, y_test = load_data()
model=Sequential(Flatten(input_shape=(28, 28)))
layer = Dense(300, name='dense1', activation='relu')
layer.trainable=True
model.add(layer)
layer2 = Dense(100, name='dense2', activation='relu')
layer2.trainable=False
model.add(layer2)
layer3 = Dense(10, name='dense3', activation='softmax')
model.add(layer3)
model.compile(loss=categorical_crossentropy, optimizer='Adam',metrics ['accuracy'])
print(model.summary())
print("x_train.shape():",x_train.shape)
print("y_train.shape()",y_train.shape)
model.fit(x_train, y_train, epochs=5, verbose=2)
print(model.evaluate(x_test, y_test))
return model
def stopBackprop(x):
stopped=stop_gradient(x)
return x*(1-mask) + stopped*mask
def run_certain_weights():
x_train, y_train, x_test, y_test = load_data()
model=Sequential(Flatten(input_shape=(28, 28)))
mask = np.zeros((300,))
print(mask.shape)
mask[220:228,] = 1
layer = Dense(300, name='dense1', activation='relu')
layer.trainable=False
model.add(layer)
#before the dense2 layer
new_layer=Lambda(stopBackprop)(layer)
model.add(new_layer)
layer2 = Dense(300, name='dense2', activation='relu')
layer2.trainable=True
model.add(layer2)
layer3 = Dense(10, name='dense3', activation='softmax')
model.add(layer3)
model.compile(loss=categorical_crossentropy, optimizer='Adam',metrics = ['accuracy'])
print(model.summary())
print("x_train.shape():",x_train.shape)
print("y_train.shape()",y_train.shape)
model.fit(x_train, y_train, epochs=5, verbose=2)
print(model.evaluate(x_test, y_test))
return model
def freeze(model):
x_train, y_train, x_test, y_test = load_data()
name = 'dense2'
weightsAndBias = model.get_layer(name=name).get_weights()
# freeze the weights of this layer
model.get_layer(name=name).trainable = False
# record the weights before retrain
weights_before = weightsAndBias[0]
# retrain
print("x_train.shape():",x_train.shape)
print("y_train.shape()",y_train.shape)
model.fit(x_train, y_train, verbose=2, epochs=1)
weights_after = model.get_layer(name=name).get_weights()[0]
if (weights_before == weights_after).all():
print('the weights did not change!!!')
else:
print('the weights changed!!!!')
if __name__ == '__main__':
model = run()
freeze(model)
model = run_certain_weights()
freeze(model)
Related
I am using from tensorflow.keras.preprocessing.image import ImageDataGenerator
Here is the code :
(x_train, y_train), (x_test, y_test) = cifar10.load_data()
x_train, x_test = x_train.astype('float32') / 255, x_test.astype('float32') / 255
y_train, y_test = to_categorical(y_train), to_categorical(y_test)
img_gen = ImageDataGenerator(
rotation_range=10,
width_shift_range=.1,
height_shift_range=.1,
horizontal_flip=True,
vertical_flip=True,
fill_mode="nearest"
)
img_gen_train = img_gen.flow(x_train, y_train, batch_size=128, shuffle=True)
rand_tuner = RandomSearch(hypermodel=hypermodel,
objective='val_acc',
max_trials=max_trials,
project_name='cifar10')
then I am building a model using keras tuner HyperModel:
def hypermodel(hp):
units_choice = hp.Int('units', min_value=32, max_value=512, step=32, default=128)
lr_choice = hp.Float('learning_rate', 1e-5, 1e-2, sampling='LOG', default=1e-3)
dropout_rate_choice = hp.Float('rate', 0, .5, step=.1, default=.2)
filters_choice = hp.Choice('num_filters', values=[32, 64], default=64)
model = Sequential()
model.add(Conv2D(filters=16, kernel_size=3,
activation='relu', input_shape=input_shape))
model.add(Dropout(rate=dropout_rate_choice))
model.add(Flatten())
model.add(Dense(units=units_choice, activation='relu'))
model.add(Dense(num_labels, activation='softmax'))
model.compile(loss='sparse_categorical_crossentropy',
optimizer=Adam(lr_choice),
metrics=['accuracy'])
return model
After that, in an attempt to search best got an error :
How to deal with it?
Looks like Sparse_categorical_crossentropy wasn't the best choice for the generator and that was the whole problem.
Reference: https://github.com/keras-team/keras-tuner/issues/223
I am training a small network and the training seems to go fine, the val loss decreases, I reach validation accuracy around 80, and it actually stops training once there is no more improvement (patience=10). It trained for 40 epochs. However, it keeps predicting only one class for every test image! I tried to initialize the conv layers randomly, I added regularizers, I switched from Adam to SGD, I added clipvalue, I added dropouts. I also switched to softmax (I have only two labels but I saw some recommendation on using softmax and Dense layer with 2 neurons). Some or one of these helped with the overfitting, but nothing worked for the prediction problem. The data is balanced, though it is a small dataset, so it doesn't make sense that it reaches 80% if it predicts the same labels for evaluation set as well.
What is wrong with my model and how can I fix it? Any comments are welcome.
#Import some packages to use
import cv2
import numpy as np
import pandas as pd
import matplotlib.pyplot as plt
from keras.preprocessing.image import ImageDataGenerator
import os
from keras.regularizers import l2
from keras.callbacks import EarlyStopping, ModelCheckpoint, ReduceLROnPlateau
from keras.layers.core import Dense, Dropout, Flatten
from keras.layers.convolutional import Conv2D, MaxPooling2D
from keras.initializers import RandomNormal
os.environ["CUDA_VISIBLE_DEVICES"]="0"
epochs = 200
callbacks = []
#schedule = None
decay = 0.0
earlyStopping = EarlyStopping(monitor='val_loss', patience=10, verbose=0, mode='min')
mcp_save = ModelCheckpoint('.mdl_wts.hdf5', save_best_only=True, monitor='val_loss', mode='min')
reduce_lr_loss = ReduceLROnPlateau(monitor='val_loss', factor=0.1, patience=3, verbose=1, epsilon=1e-5, mode='min')
train_dir = '/home/d/Desktop/s/data/train'
eval_dir = '/home/d/Desktop/s/data/eval'
test_dir = '/home/d/Desktop/s/data/test'
# create a data generator
train_datagen = ImageDataGenerator(rescale=1./255, #Scale the image between 0 and 1
rotation_range=40,
width_shift_range=0.2,
height_shift_range=0.2,
shear_range=0.2,
zoom_range=0.2,
horizontal_flip=True,)
val_datagen = ImageDataGenerator(rescale=1./255) #We do not augment validation data. we only perform rescale
test_datagen = ImageDataGenerator(rescale=1./255) #We do not augment validation data. we only perform rescale
# load and iterate training dataset
train_generator = train_datagen.flow_from_directory(train_dir, target_size=(224,224),class_mode='categorical', batch_size=16, shuffle='True', seed=42)
# load and iterate validation dataset
val_generator = val_datagen.flow_from_directory(eval_dir, target_size=(224,224),class_mode='categorical', batch_size=16, shuffle='True', seed=42)
# load and iterate test dataset
test_generator = test_datagen.flow_from_directory(test_dir, target_size=(224,224), class_mode=None, batch_size=1, shuffle='False', seed=42)
#We will use a batch size of 32. Note: batch size should be a factor of 2.***4,8,16,32,64...***
#batch_size = 4
#from keras import layers
from keras import models
from keras import optimizers
#from keras.layers import Dropout
#from keras.preprocessing.image import ImageDataGenerator
from keras.preprocessing.image import img_to_array, load_img
model = models.Sequential()
model.add(Conv2D(64, (3, 3), activation='relu', name='block1_conv1', kernel_initializer=RandomNormal(
mean=0.0, stddev=0.05), bias_initializer=RandomNormal(mean=0.0, stddev=0.05), input_shape=(224, 224, 3)))
model.add(Conv2D(64, (3, 3), activation='relu', name='block1_conv2', kernel_initializer=RandomNormal(
mean=0.0, stddev=0.05), bias_initializer=RandomNormal(mean=0.0, stddev=0.05)))
model.add(MaxPooling2D((2, 2)))
model.add(Dropout(0.2))
model.add(Conv2D(128, (3, 3), activation='relu', name='block2_conv1', kernel_initializer=RandomNormal(
mean=0.0, stddev=0.05), bias_initializer=RandomNormal(mean=0.0, stddev=0.05)))
model.add(Conv2D(128, (3, 3), activation='relu', name='block2_conv2',kernel_initializer=RandomNormal(
mean=0.0, stddev=0.05), bias_initializer=RandomNormal(mean=0.0, stddev=0.05)))
model.add(MaxPooling2D((2, 2), name='block2_pool'))
model.add(Dropout(0.2))
model.add(Conv2D(256, (3, 3), activation='relu', name='block3_conv1', kernel_initializer=RandomNormal(
mean=0.0, stddev=0.05), bias_initializer=RandomNormal(mean=0.0, stddev=0.05)))
model.add(Conv2D(256, (3, 3), activation='relu', name='block3_conv2', kernel_initializer=RandomNormal(
mean=0.0, stddev=0.05), bias_initializer=RandomNormal(mean=0.0, stddev=0.05)))
model.add(Conv2D(256, (3, 3), activation='relu', name='block3_conv3', kernel_initializer=RandomNormal(
mean=0.0, stddev=0.05), bias_initializer=RandomNormal(mean=0.0, stddev=0.05)))
model.add(MaxPooling2D((2, 2), name='block3_pool'))
model.add(Dropout(0.2))
#model.add(layers.Conv2D(512, (3, 3), activation='relu', name='block4_conv1'))
#model.add(layers.Conv2D(512, (3, 3), activation='relu', name='block4_conv2'))
#model.add(layers.Conv2D(512, (3, 3), activation='relu', name='block4_conv3'))
#model.add(layers.MaxPooling2D((2, 2), name='block4_pool'))
model.add(Flatten())
model.add(Dense(256, kernel_regularizer=l2(0.01), bias_regularizer=l2(0.01), activation='relu', kernel_initializer='he_uniform'))
model.add(Dropout(0.5))
model.add(Dense(2, kernel_regularizer=l2(0.01), bias_regularizer=l2(0.01), activation='softmax'))
#Lets see our model
model.summary()
#We'll use the RMSprop optimizer with a learning rate of 0.0001
#We'll use binary_crossentropy loss because its a binary classification
#model.compile(loss='binary_crossentropy', optimizer=optimizers.SGD(lr=1e-5, momentum=0.9), metrics=['acc'])
model.compile(loss='categorical_crossentropy',
#optimizer=optimizers.Adadelta(lr=1.0, rho=0.95, epsilon=1e-08, decay=decay),
optimizer=optimizers.SGD(lr= 0.0001, clipvalue = 0.5, decay=1e-6, momentum=0.9, nesterov=True),
metrics=['accuracy'])
#The training part
#We train for 64 epochs with about 100 steps per epoch
history = model.fit_generator(train_generator,
steps_per_epoch=train_generator.n // train_generator.batch_size,
epochs=epochs,
validation_data=val_generator,
validation_steps=val_generator.n // val_generator.batch_size,
callbacks=[earlyStopping, mcp_save]) #, reduce_lr_loss])
#Save the model
model.save_weights('/home/d/Desktop/s/categorical_weights.h5')
model.save('/home/d/Desktop/s/categorical_model_keras.h5')
#lets plot the train and val curve
#get the details form the history object
acc = history.history['acc']
val_acc = history.history['val_acc']
loss = history.history['loss']
val_loss = history.history['val_loss']
epochs = range(1, len(acc) + 1)
#Train and validation accuracy
plt.plot(epochs, acc, 'b', label='Training accuracy')
plt.plot(epochs, val_acc, 'r', label='Validation accuracy')
plt.title('Training and Validation accuracy')
plt.legend()
plt.figure()
#Train and validation loss
plt.plot(epochs, loss, 'b', label='Training loss')
plt.plot(epochs, val_loss, 'r', label='Validation loss')
plt.title('Training and Validation loss')
plt.legend()
plt.show()
model.evaluate_generator(generator=val_generator, steps=val_generator.n // val_generator.batch_size)
STEP_SIZE_TEST=test_generator.n//test_generator.batch_size
test_generator.reset()
pred=model.predict_generator(test_generator,
steps=STEP_SIZE_TEST,
verbose=1)
predicted_class_indices=np.argmax(pred,axis=1)
labels = (train_generator.class_indices)
np.save('/home/d/Desktop/s/classes', labels)
labels = dict((v,k) for k,v in labels.items())
predictions = [labels[k] for k in predicted_class_indices]
filenames=test_generator.filenames
results=pd.DataFrame({"Filename":filenames,
"Predictions":predictions})
results.to_csv("categorical_results.csv",index=False)
One of the problems that could lead to such behavior is imbalanced dataset. Your model found out that if it predicts the dominant class each time, it would get a good results.
There are many ways to tackle an imbalance dataset. Here is a good tutorial.
One of the easiest yet powerful solution is to apply higher penalty to your loss if it wrongly predicted the smaller class. This can be implemented in keras by setting the parameter class_weight in the fitor fit_generator function.
It can be a dictionary of example:
class_weight = {0: 0.75, 1: 0.25} # does not necessarily add to up 1.
history = model.fit_generator(train_generator,
steps_per_epoch=train_generator.n // train_generator.batch_size,
epochs=epochs,
class_weight= class_weight, # this is the important part
validation_data=val_generator,
validation_steps=val_generator.n // val_generator.batch_size,
callbacks=[earlyStopping, mcp_save]) #, reduce_lr_loss])
Adding to Coderji's answer, it might also prove advantageous to counter class imbalance using stratified k-fold cross-validation, with k = 5 being common practice. This basically splits your data set up into k splits like regular cross-validation, but also stratifies these splits. In the case of class imbalance, each of these splits contain over-/undersampled classes compensating for their lower/higher occurence within the data set.
As of yet Keras does not have it's own way to use stratified k-fold cross-validation. Instead it's advised to use sklearn's StratifiedKFold. This article gives a detailed overview how to achieve this in Keras,
with the gist of it being:
from sklearn.model_selection import StratifiedKFold# Instantiate the cross validator
skf = StratifiedKFold(n_splits=kfold_splits, shuffle=True)# Loop through the indices the split() method returns
for index, (train_indices, val_indices) in enumerate(skf.split(X, y)):
print "Training on fold " + str(index+1) + "/10..." # Generate batches from indices
xtrain, xval = X[train_indices], X[val_indices]
ytrain, yval = y[train_indices], y[val_indices] # Clear model, and create it
model = None
model = create_model()
# Debug message I guess
# print "Training new iteration on " + str(xtrain.shape[0]) + " training samples, " + str(xval.shape[0]) + " validation samples, this may be a while..."
history = train_model(model, xtrain, ytrain, xval, yval)
accuracy_history = history.history['acc']
val_accuracy_history = history.history['val_acc']
print "Last training accuracy: " + str(accuracy_history[-1]) + ", last validation accuracy: " + str(val_accuracy_history[-1])
create_model() returns a compiled Keras model
train_model() returns last history object of its last model.fit() operation
I am running MNIST prediction using Keras, with tensorflow backend.
I have code that runs with batches , using Keras fit() as
(X_train, y_train), (X_test, y_test) = mnist.load_data()
N1 = X_train.shape[0]
N2 = X_test.shape[0]
h = X_train.shape[1]
w = X_train.shape[2]
num_pixels = h*w
# reshape N1 samples to num_pixels
x_train = X_train.reshape(N1, num_pixels).astype('float32') # shape is now (60000,784)
x_test = X_test.reshape(N2, num_pixels).astype('float32') # shape is now (10000,784)
x_train = x_train / 255
x_test = x_test / 255
y_train = np_utils.to_categorical(y_train) #(60000,10)
y_test = np_utils.to_categorical(y_test) # (10000,10):
num_classes = y_test.shape[1]
def baseline_model():
# create model
model = Sequential()
model.add(Dense(num_pixels, input_dim=num_pixels, kernel_initializer='normal', activation='relu'))
model.add(Dense(num_classes, kernel_initializer='normal', activation='softmax'))
model.compile(loss='categorical_crossentropy', optimizer='adam', metrics=['accuracy'])
return model
model = baseline_model()
batch_size = 200
epochs = 20
max_batches = 2 * len(x_train) / batch_size # 2*60000/200
# reshape to be [samples][width][height][ channel] for ImageDataGenerator
x_t = X_train.reshape(N1, w, h, 1).astype('float32')
datagen = ImageDataGenerator(rescale= 1./255)
train_gen = datagen.flow(x_t, y_train, batch_size=batch_size)
for e in range(epochs):
batches = 0
for x_batch, y_batch in train_gen:
# x_batch is of size [batch_sz,w,h,ch]: resize to [bth_sz,pixel_sz]: (200,28,28,1)-> (200,784)
# for model.fit
x_batch = np.reshape(x_batch, [-1, num_pixels])
model.fit(x_batch, y_batch,validation_split=0.15,verbose=0)
batches += 1
print("Epoch %d/%d, Batch %d/%d" % (e+1, epochs, batches, max_batches))
if batches >= max_batches:
break
scores = model.evaluate(x_test, y_test, verbose=0)
However, when I try to implement similar code using fit_generator(), I get an error.
the code is as below:
(X_train, y_train), (X_test, y_test) = mnist.load_data()
# separate data into train and validation
from sklearn.model_selection import train_test_split
# Split the data
X_train, X_valid, y_train, y_valid = train_test_split(X_train, y_train, test_size=0.15, shuffle= True)
# number of training samples
N1 = X_train.shape[0] # training size
N2 = X_test.shape[0] # test size
N3 = X_valid.shape[0] # valid size
h = X_train.shape[1]
w = X_train.shape[2]
num_pixels = h*w
y_train = np_utils.to_categorical(y_train)
y_valid = np_utils.to_categorical(y_valid)
y_test = np_utils.to_categorical(y_test)
num_classes = y_test.shape[1]
def baseline_model():
# create model
model = Sequential()
model.add(Dense(num_pixels, input_dim=num_pixels, kernel_initializer='normal', activation='relu'))
model.add(Dense(num_classes, kernel_initializer='normal', activation='softmax'))
model.compile(loss='categorical_crossentropy', optimizer='adam', metrics=['accuracy'])
return model
model = baseline_model()
batch_size = 200
epochs = 20
steps_per_epoch_tr = int(N1/ batch_size) # 51000/200
steps_per_epoch_val = int(N3/batch_size)
# reshape to be [samples][width][height][ channel] for ImageData Gnerator->datagen.flow
x_t = X_train.reshape(N1, w, h, 1).astype('float32')
x_v = X_valid.reshape(N3, w, h, 1).astype('float32')
# define data preparation
datagen = ImageDataGenerator(rescale=1./255) # scales x_t/x_v
train_gen = datagen.flow(x_t, y_train, batch_size=batch_size)
valid_gen = datagen.flow(x_v,y_valid, batch_size=batch_size)
model.fit_generator(train_gen,steps_per_epoch = steps_per_epoch_tr,validation_data = valid_gen,
validation_steps = steps_per_epoch_val,epochs=epochs)
This gives an error:
This is due to expected image dimension error, but I am not sure where/how to fix this. any help is greatly appreciated.
Thanks
sedy
In the model.fit() case, this line flattened the input before feeding it for training.
x_batch = np.reshape(x_batch, [-1, num_pixels])
But in the generator case, there is nothing to flatten the input before feeding it to the Dense layer. The Dense layer cannot process 2D input (28 x 28). Adding, a Flatten() layer to the model should do the trick as shown below.
def baseline_model():
# create model
model = Sequential()
model.add(Flatten(input_shape=(28,28,1)))
model.add(Dense(num_pixels, input_dim=num_pixels, kernel_initializer='normal', activation='relu'))
model.add(Dense(num_classes, kernel_initializer='normal', activation='softmax'))
model.compile(loss='categorical_crossentropy', optimizer='adam', metrics=['accuracy'])
return model
I'm worked on sentiment analysis task using universal sentence encoder embed_size=512 with CNN but have an error says: Input 0 is incompatible with layer conv1d_6: expected ndim=3, found ndim=2.
and wanna know if this is right to add universal sentence encoder with CNN in this way or not?
pickle_in=open("X.pickle","rb")
X=pickle.load(pickle_in)
X = X.tolist() #convert x to list as The embedding code works once I
converted
the pandas.series data type to list.
X = np.array(X, dtype=object)[:, np.newaxis]
pickle_in=open("Y.pickle","rb")
Y=pickle.load(pickle_in)
Y = np.asarray(pd.get_dummies(Y), dtype = np.int8)
import tensorflow as tf
import tensorflow_hub as hub
module_url = "https://tfhub.dev/google/universal-sentence-encoder-large/3"
embed = hub.Module(module_url)
X_train, X_test, Y_train, Y_test = train_test_split(X,Y, test_size = 0.15,
random_state = 42)
X_train, X_Val, Y_train, Y_Val = train_test_split(X_train,Y_train, test_size
= 0.15, random_state = 42)
print(X_train.shape,Y_train.shape)
print(X_test.shape,Y_test.shape)
print(X_Val.shape,Y_Val.shape)
type(Y_test)
embed_size = embed.get_output_info_dict()['default'].get_shape()[1].value
def UniversalEmbedding(x):
return embed(tf.squeeze(tf.cast(x, tf.string)),
signature="default", as_dict=True)["default"]
import keras
seed=7
np.random.seed(seed)
from keras.layers import Input, Dense, concatenate, Activation,
GlobalMaxPooling1D
from keras import layers
from keras.models import Model
input_text = layers.Input(shape=(1,), dtype=tf.string)
embedding = layers.Lambda(UniversalEmbedding,
output_shape=(embed_size,))(input_text)
bigram_branch = Conv1D(filters=64, kernel_size=1, padding='same',
activation='relu', strides=1)(embedding)
bigram_branch = GlobalMaxPooling1D()(bigram_branch)
trigram_branch = Conv1D(filters=64, kernel_size=2, padding='same',
activation='relu', strides=1)(embedding)
trigram_branch = GlobalMaxPooling1D()(trigram_branch)
fourgram_branch = Conv1D(filters=64, kernel_size=3, padding='same',
activation='relu', strides=1)(embedding)
fourgram_branch = GlobalMaxPooling1D()(fourgram_branch)
merged = concatenate([bigram_branch, trigram_branch, fourgram_branch],
axis=1)
merged = Dense(512, activation='relu')(merged)
merged = Dropout(0.8)(merged)
merged = Dense(2)(merged)
output = Activation('sigmoid')(merged)
model = Model(inputs=[tweet_input], outputs=[output])
adam=keras.optimizers.Adam(lr=0.001, beta_1=0.9, beta_2=0.999, epsilon=None,
decay=0.0, amsgrad=False)
model.compile(loss='mean_squared_error',
optimizer= adam,
metrics=['accuracy'])
model.summary()
You can not directly pass Universal Sentence Encoder to Conv1D because Conv1D expected a tensor with shape [batch, sequence, feature] while the output of Universal Sentence Encoder is [batch, feature]. It is also stated in tfhub.dev:
The input is variable length English text and the output is a 512
dimensional vector.
How can I fix this?
In my view, the easiest possible solution is to use ELMo on Tensorhub. With ELMo you can map each sentence to [batch, sequence, feature] and then feed into the Conv1D.
I was trying to compare Conv2D and ConvLSTM2D architecture to estimate high resolution image from low resolution ones. But the predictions showed large difference between two architectures. What is causing such erroneous predictions? Is it due to incorrect implementation of the architectures?
In case of ConvLSTM2D:
import numpy as np, scipy.ndimage, matplotlib.pyplot as plt
from keras.models import Sequential
from keras.layers import Dense, Dropout, Activation, Flatten
from keras.layers import Convolution2D, ConvLSTM2D, MaxPooling2D, UpSampling2D
from sklearn.metrics import accuracy_score, confusion_matrix, cohen_kappa_score
from sklearn.preprocessing import MinMaxScaler, StandardScaler
np.random.seed(123)
raw = np.arange(96).reshape(8,3,4)
data1 = scipy.ndimage.zoom(raw, zoom=(1,100,100), order=1, mode='nearest') #low res
print (data1.shape)
#(8, 300, 400)
data2 = scipy.ndimage.zoom(raw, zoom=(1,100,100), order=3, mode='nearest') #high res
print (data2.shape)
#(8, 300, 400)
X_train = data1.reshape(1, data1.shape[0], data1.shape[1], data1.shape[2], 1)
Y_train = data2.reshape(1, data2.shape[0], data2.shape[1], data2.shape[2], 1)
model = Sequential()
input_shape = (data1.shape[0], data1.shape[1], data1.shape[2], 1)
model.add(ConvLSTM2D(16, kernel_size=(3, 3), activation='sigmoid', padding='same',input_shape=input_shape,return_sequences=True))
model.add(ConvLSTM2D(1, kernel_size=(3, 3), activation='sigmoid', padding='same',return_sequences=True))
model.compile(loss='mse', optimizer='adam')
model.fit(X_train, Y_train,
batch_size=1, epochs=10, verbose=1)
y_predict = model.predict(X_train)
y_predict = y_predict.reshape(data1.shape[0], data1.shape[1], data1.shape[2])
slope, intercept, r_value, p_value, std_err = linregress(data2[0,:,:].reshape(-1), y_predict[0,:,:].reshape(-1))
print (r_value**2)
0.26
In case of Conv2D:
X_train = data1.reshape(data1.shape[0], data1.shape[1], data1.shape[2], 1)
Y_train = data2.reshape(data2.shape[0], data2.shape[1], data2.shape[2], 1)
model = Sequential()
input_shape = (data1.shape[1], data1.shape[2], 1)
model.add(Convolution2D(64, kernel_size=(3,3), activation='sigmoid',padding='same',input_shape=input_shape))
model.add(Convolution2D(1, kernel_size=(3,3), activation='sigmoid',padding='same'))
model.compile(loss='mse', optimizer='adam')
model.fit(X_train, Y_train,
batch_size=1, epochs=10, verbose=1)
y_predict = model.predict(X_train)
y_predict = y_predict.reshape(data1.shape[0], data1.shape[1], data1.shape[2])
slope, intercept, r_value, p_value, std_err = linregress(data2[0,:,:].reshape(-1), y_predict[0,:,:].reshape(-1))
print (r_value**2)
0.93
Two important things may be severely affecting the results:
You have 64 Conv2D filters against 16 ConvLSTM2D filters
The LSTM layer is trying to understand a "movie" with all images in sequence, this is certainly more complicated than just processing individual images.
For the second point, you may try a shape of (8,1,300,400,1) instead. This will eliminate the time steps (and should make the LSTM work exactly as the Conv2D if we understand them correctly). But then this is useless as a recurrent layer.
Unfortunately, this is the only way to "compare" them. The LSTM layers are good for "movies" (images are frames in sequence), but this does not seem to be your case.