Way to use bisect module for sets in python - python-3.x

I was looking for something similar to lower_bound() function for sets in
python, as we have in C++.
Task is to have a ds, which inserts element in sorted manner, storing only single instance of each distinct value, and returns the left neighbor of a given value, both operations in O(logn) worst time in python.
python: something similar to bisect module for lists, with efficient insertion may work.

sets are unordered, and the standard lib does not offer tree structures.
Maybe you could look at sorted containers (3rd party lib): http://www.grantjenks.com/docs/sortedcontainers/ it might offer a good approach to your problem.

Related

shuffle and take first vs sampling in haskell

In Ruby Programming language myList.shuffle.first is slower than myList.sample since it completely shuffle the list and pick the first element. If something similar (shuffle and take first) is done in Haskell, will that be as fast as the later (sampling the array)? I am assuming that the list will be shuffled lazily so picking the first element or taking the sample will be virtually same.
It can be written to behave that way, using the decorate-sort-undecorate pattern: first label each element in your list with a random number; sort by the labels; throw away the labels; and take the first element. The standard implementation of sort will make this an O(n) operation, just like sampling would be. Not sure if there are any packages that offer this out of the box, and of course the manually written version of the algorithm may have better constants.

Haskell data structure that is efficient for swapping elements?

I am looking for a Haskell data structure that stores an ordered list of elements and that is time-efficient at swapping pairs of elements at arbitrary locations within the list. It's not [a], obviously. It's not Vector because swapping creates new vectors. Which data structure is efficient at this?
The most efficient implementations of persistent data structures, which exhibit O(1) updates (as well as appending, prepending, counting and slicing), are based on the Array Mapped Trie algorithm. The Vector data-structures of Clojure and Scala are based on it, for instance. The only Haskell implementation of that data-structure that I know of is presented by the "persistent-vector" package.
This algorithm is very young, it was only first presented in the year 2000, which might be the reason why not so many people have ever heard about it. But the thing turned out to be such a universal solution that it got adapted for Hash-tables soon after. The adapted version of this algorithm is called Hash Array Mapped Trie. It is as well used in Clojure and Scala to implement the Set and Map data-structures. It is also more ubiquitous in Haskell with packages like "unordered-containers" and "stm-containers" revolving around it.
To learn more about the algorithm I recommend the following links:
http://blog.higher-order.net/2009/02/01/understanding-clojures-persistentvector-implementation.html
http://lampwww.epfl.ch/papers/idealhashtrees.pdf
Data.Sequence from the containers package would likely be a not-terrible data structure to start with for this use case.
Haskell is a (nearly) pure functional language, so any data structure you update will need to make a new copy of the structure, and re-using the data elements is close to the best you can do. Also, the new list would be lazily evaluated and typically only the spine would need to be created until you need the data. If the number of updates is small compared to the number of elements, you could make a difference list that checks a sparse set of updates first, and only then looks in the original vector.

Efficient algorithm for grouping array of strings by prefixes

I wonder what is the best way to group an array of strings according to a list of prefixes (of arbitrary length).
For example, if we have this:
prefixes = ['GENERAL', 'COMMON', 'HY-PHE-NATED', 'UNDERSCORED_']
Then
tasks = ['COMMONA', 'COMMONB', 'GENERALA', 'HY-PHE-NATEDA', 'UNDERESCORED_A', 'HY-PHE-NATEDB']
Should be grouped this way:
[['GENERALA'], ['COMMONA', 'COMMONB'], ['HY-PHE-NATEDA', 'HY-PHE-NATEDB'], ['UNDERESCORED_A'] ]
The naïve approach is to loop through all the tasks and inner loop through prefixes (or vice versa, whatever) and test each task for each prefix.
Can one give me a hint how to make this in a more efficient way?
It depends a bit on the size of your problem, of course, but your naive approach should be okay if you sort both your prefixes and your tasks and then build your sub-arrays by traversing both sorted lists only forwards.
There are a few options, but you might be interested in looking into the trie data structure.
http://en.wikipedia.org/wiki/Trie
The trie data structure is easy to understand and implement and works well for this type of problem. If you find that this works for your situation you can also look at Patricia Tries which achieve the similar performance characteristics but typically have better memory utilization. They are a little more involved to implement but not overly complex.

Looking for an efficient array-like structure that supports "replace-one-member" and "append"

As an exercise I wrote an implementation of the longest increasing subsequence algorithm, initially in Python but I would like to translate this to Haskell. In a nutshell, the algorithm involves a fold over a list of integers, where the result of each iteration is an array of integers that is the result of either changing one element of or appending one element to the previous result.
Of course in Python you can just change one element of the array. In Haskell, you could rebuild the array while replacing one element at each iteration - but that seems wasteful (copying most of the array at each iteration).
In summary what I'm looking for is an efficient Haskell data structure that is an ordered collection of 'n' objects and supports the operations: lookup i, replace i foo, and append foo (where i is in [0..n-1]). Suggestions?
Perhaps the standard Seq type from Data.Sequence. It's not quite O(1), but it's pretty good:
index (your lookup) and adjust (your replace) are O(log(min(index, length - index)))
(><) (your append) is O(log(min(length1, length2)))
It's based on a tree structure (specifically, a 2-3 finger tree), so it should have good sharing properties (meaning that it won't copy the entire sequence for incremental modifications, and will perform them faster too). Note that Seqs are strict, unlike lists.
I would try to just use mutable arrays in this case, preferably in the ST monad.
The main advantages would be making the translation more straightforward and making things simple and efficient.
The disadvantage, of course, is losing on purity and composability. However I think this should not be such a big deal since I don't think there are many cases where you would like to keep intermediate algorithm states around.

What's the most idiomatic approach to multi-index collections in Haskell?

In C++ and other languages, add-on libraries implement a multi-index container, e.g. Boost.Multiindex. That is, a collection that stores one type of value but maintains multiple different indices over those values. These indices provide for different access methods and sorting behaviors, e.g. map, multimap, set, multiset, array, etc. Run-time complexity of the multi-index container is generally the sum of the individual indices' complexities.
Is there an equivalent for Haskell or do people compose their own? Specifically, what is the most idiomatic way to implement a collection of type T with both a set-type of index (T is an instance of Ord) as well as a map-type of index (assume that a key value of type K could be provided for each T, either explicitly or via a function T -> K)?
I just uploaded IxSet to hackage this morning,
http://hackage.haskell.org/package/ixset
ixset provides sets which have multiple indexes.
ixset has been around for a long time as happstack-ixset. This version removes the dependencies on anything happstack specific, and is the new official version of IxSet.
Another option would be kdtree:
darcs get http://darcs.monoid.at/kdtree
kdtree aims to improve on IxSet by offering greater type-safety and better time and space usage. The current version seems to do well on all three of those aspects -- but it is not yet ready for prime time. Additional contributors would be highly welcomed.
In the trivial case where every element has a unique key that's always available, you can just use a Map and extract the key to look up an element. In the slightly less trivial case where each value merely has a key available, a simple solution it would be something like Map K (Set T). Looking up an element directly would then involve first extracting the key, indexing the Map to find the set of elements that share that key, then looking up the one you want.
For the most part, if something can be done straightforwardly in the above fashion (simple transformation and nesting), it probably makes sense to do it that way. However, none of this generalizes well to, e.g., multiple independent keys or keys that may not be available, for obvious reasons.
Beyond that, I'm not aware of any widely-used standard implementations. Some examples do exist, for example IxSet from happstack seems to roughly fit the bill. I suspect one-size-kinda-fits-most solutions here are liable to have a poor benefit/complexity ratio, so people tend to just roll their own to suit specific needs.
Intuitively, this seems like a problem that might work better not as a single implementation, but rather a collection of primitives that could be composed more flexibly than Data.Map allows, to create ad-hoc specialized structures. But that's not really helpful for short-term needs.
For this specific question, you can use a Bimap. In general, though, I'm not aware of any common class for multimaps or multiply-indexed containers.
I believe that the simplest way to do this is simply with Data.Map. Although it is designed to use single indices, when you insert the same element multiple times, most compilers (certainly GHC) will make the values place to the same place. A separate implementation of a multimap wouldn't be that efficient, as you want to find elements based on their index, so you cannot naively associate each element with multiple indices - say [([key], value)] - as this would be very inefficient.
However, I have not looked at the Boost implementations of Multimaps to see, definitively, if there is an optimized way of doing so.
Have I got the problem straight? Both T and K have an order. There is a function key :: T -> K but it is not order-preserving. It is desired to manage a collection of Ts, indexed (for rapid access) both by the T order and the K order. More generally, one might want a collection of T elements indexed by a bunch of orders key1 :: T -> K1, .. keyn :: T -> Kn, and it so happens that here key1 = id. Is that the picture?
I think I agree with gereeter's suggestion that the basis for a solution is just to maintiain in sync a bunch of (Map K1 T, .. Map Kn T). Inserting a key-value pair in a map duplicates neither the key nor the value, allocating only the extra heap required to make a new entry in the right place in the index. Inserting the same value, suitably keyed, in multiple indices should not break sharing (even if one of the keys is the value). It is worth wrapping the structure in an API which ensures that any subsequent modifications to the value are computed once and shared, rather than recomputed for each entry in an index.
Bottom line: it should be possible to maintain multiple maps, ensuring that the values are shared, even though the key-orders are separate.

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