PyTorch Fashion-MNIST (ETL) - python-3.x

I'm new to Deep Learning and PyTorch, so please do bear with me if some questions seem silly or I'm not asking in the correct format.
I was watching this video as part of a PyTorch series on Deep Learning: https://www.youtube.com/watch?v=8n-TGaBZnk4 . This video specifically is about ETL (using Fashion-MNIST dataset).
I have a few questions on the video at 7:05.
Question 1: In the Fashion-MNIST subclass constructor we passed it the argument:
‘root’, where the instructor mentioned: this is the location in disk where data is located. Sorry maybe this is a silly question, but is this where the data is located on the source server (from the URL) disk, or is this the path location where you want to save the data on your computer locally?
Question 2: Also for the Fashion-MNIST is the 'root' always the same location path: i.e. './data/FashionMNIST'?
Question 3: If the 'root' defines the location path where the data is located on the source server, then where would it be downloaded on locally? I checked my 'download' folder (I'm using Windows 7 laptop), and couldn't find the files there?
Question 4: The video mentioned that we should check if the data, in subsequent calls, are downloaded already or not (i.e. in the argument we pass download=true).
4(a): What's a good approach to do this? Do we put an if statement in place to check for this? Or is there a smarter way of checking for downloaded data?
4(b): Also what does it mean by "subsequent calls"? Does it mean when we need to call the 'FashionMNIST' constructor again for the test_data download?
Question 5: Finally, I tried running the code below (which is the one in the video) on Spyder IDE (Python 3.5):
import torch
import torchvision
import torchvision.transforms as transforms
train_set = torchvision.datasets.FashionMNIST(
root='./data/FashionMNIST'
,train=True
,download=True
,transform=transforms.Compose([
transforms.ToTensor()
])
)
I got the output:
Traceback (most recent call last):
File "<ipython-input-3-3ac000b9e90a>", line 10, in <module>
transforms.ToTensor()
File "C:\Program Files\Anaconda3\lib\site-packages\torchvision\datasets\mnist.py", line 68, in __init__
self.download()
File "C:\Program Files\Anaconda3\lib\site-packages\torchvision\datasets\mnist.py", line 136, in download
makedir_exist_ok(self.raw_folder)
File "C:\Program Files\Anaconda3\lib\site-packages\torchvision\datasets\utils.py", line 41, in makedir_exist_ok
os.makedirs(dirpath)
File "C:\Program Files\Anaconda3\lib\os.py", line 241, in makedirs
mkdir(name, mode)
FileNotFoundError: [WinError 206] The filename or extension is too long: './data/FashionMNIST\\FashionMNIST\\raw'
Not sure why I got that error at the end. In addition I ran the code on Jupyter Notebook, as per the video, and it worked fine. But I'm wondering why it throws that error in Spyder IDE.
Many thanks in advance.

No genuine question is a silly question, Answering questions one bye one:
Ans 1 & 2 :
root is the path on your local disk where the data will be saved, you can give ny path according to your liking it will not cause an issue.
Ans 3:
The urls etc are defined within the files and the path of the data is all you need to do: in order to look at the urls from where the data is downloaded here is a link.
Ans 4. : download = True merely gives it permission to download if the data doesn't exists the downloader will automatically check if the data already exists, if it exists it will still not download, even if download is set to be true, again it happens in the background you don't have to worry about it.
Ans5 : The issue isn't a torch issue exactly it has more to do with how it is being compiled on in windows, the issue is discussed at length here & here

Related

Setting up Visual Studio Code to run models from Hugging Face

I am trying to import models from hugging face and use them in Visual Studio Code.
I installed transformers, tensorflow, and torch.
I have tried looking at multiple tutorials online but have found nothing.
I am trying to run the following code:
from transformers import pipeline
classifier = pipeline('sentiment-analysis')
result = classifier("I hate it when I'm sitting under a tree and an apple hits my head.")
print(result)
However, I get the following error:
No model was supplied, defaulted to distilbert-base-uncased-finetuned-sst-2-english and revision af0f99b (https://huggingface.co/distilbert-base-uncased-finetuned-sst-2-english).
Using a pipeline without specifying a model name and revision in production is not recommended.
Traceback (most recent call last):
File "c:\Users\user\Desktop\Artificial Intelligence\transformers\Workshops\workshop_3.py", line 4, in <module>
classifier = pipeline('sentiment-analysis')
File "C:\Users\user\Desktop\Artificial Intelligence\transformers\src\transformers\pipelines\__init__.py", line 702, in pipeline
framework, model = infer_framework_load_model(
File "C:\Users\user\Desktop\Artificial Intelligence\transformers\src\transformers\pipelines\base.py", line 266, in infer_framework_load_model
raise ValueError(f"Could not load model {model} with any of the following classes: {class_tuple}.")
ValueError: Could not load model distilbert-base-uncased-finetuned-sst-2-english with any of the following classes: (<class 'transformers.models.auto.modeling_auto.AutoModelForSequenceClassification'>, <class 'transformers.models.auto.modeling_tf_auto.TFAutoModelForSequenceClassification'>, <class 'transformers.models.distilbert.modeling_distilbert.DistilBertForSequenceClassification'>, <class 'transformers.models.distilbert.modeling_tf_distilbert.TFDistilBertForSequenceClassification'>).
I have already searched online for ways to set up transformers to use in Visual Studio Code but nothing is helping.
Do you know how to fix this error, or if someone knows how to successfully use models from Hugging Face into my code, it would be appreciated?
This question is a little less about Hugging Face itself and likely more about installation and the installation steps you took (and potentially your program's access to the cache file where the models are automatically downloaded to.).
From what I am seeing either:
1/ your program is unable to access the model
2/ your program is throwing specific value errors in a bit of an edge case
If 1/ Take a look here: [https://huggingface.co/docs/transformers/installation#cache-setup][1]
Notice that it the docs walks through where the pre-trained models are downloaded. Check that it was downloaded here: C:\Users\username\.cache\huggingface\hub (of course with your own username on your computer instead. Check in the cache location to make sure it was downloaded? (You can check in the cache locations mentioned.)
Second, if for some reason, there is an issue with downloading, you can try downloading manually and doing it via offline mode (this is more to get it up and running): https://huggingface.co/docs/transformers/installation#offline-mode
Third, if it is downloaded, do you have the right permissions to access the .cache? (Try running your program (if it is a program that you trust) on Windows Terminal as an administrator.). Various ways - find one that you're comfortable with, here are a couple hints from Stackoverflow/StackExchange: Opening up Windows Terminal with elevated privileges, from within Windows Terminal or this: https://superuser.com/questions/1560049/open-windows-terminal-as-admin-with-winr
If 2/ I have seen people bring up very specific issues on not finding specific values (not the same as yours but similar) and the issue was solved by installing PyTorch because some models only exist as PyTorch models. You can see the full response from #YokoHono here: Transformers model from Hugging-Face throws error that specific classes couldn t be loaded

How to use yolov5 api with flask offline?

I was able to run the Flask app with yolov5 on a PC with an internet connection. I followed the steps mentioned in yolov5 docs and used this file: yolov5/utils/flask_rest_api/restapi.py,
But I need to achieve the same offline(On a particular PC). Now the issue is, when I am using the following:
model = torch.hub.load("ultralytics/yolov5", "yolov5", force_reload=True)
It tries to download model from internet. And throws an error.
Urllib.error.URLError: <urlopen error [Errno - 2] name or service not known>
How to get the same results offline.
Thanks in advance.
If you want to run detection offline, you need to have the model already downloaded.
So, download the model (for example yolov5s.pt) from https://github.com/ultralytics/yolov5/releases and store it for example to the yolov5/models.
After that, replace
# model = torch.hub.load("ultralytics/yolov5", "yolov5s", force_reload=True) # force_reload to recache
with
model = torch.hub.load(r'C:\Users\Milan\Projects\yolov5', 'custom', path=r'C:\Users\Milan\Projects\yolov5\models\yolov5s.pt', source='local')
With this line, you can run detection also offline.
Note: When you start the app for the first time with the updated torch.hub.load, it will download the model if not present (so you do not need to download it from https://github.com/ultralytics/yolov5/releases).
There is one more issue involved here. When this code is run on a machine that has no internet connection at all. Then you may face the following error.
Downloading https://ultralytics.com/assets/Arial.ttf to /home/<local_user>/.config/Ultralytics/Arial.ttf...
Traceback (most recent call last):
File "/home/<local_user>/Py_Prac_WSL/yolov5-flask-master/yolov5/utils/plots.py", line 56, in check_pil_font
return ImageFont.truetype(str(font) if font.exists() else font.name, size)
File "/home/<local_user>/.local/share/virtualenvs/23_Jun-82xb8nrB/lib/python3.8/site-packages/PIL/ImageFont.py", line 836, in truetype
return freetype(font)
File "/home/<local_user>/.local/share/virtualenvs/23_Jun-82xb8nrB/lib/python3.8/site-packages/PIL/ImageFont.py", line 833, in freetype
return FreeTypeFont(font, size, index, encoding, layout_engine)
File "/home/<local_user>/.local/share/virtualenvs/23_Jun-82xb8nrB/lib/python3.8/site-packages/PIL/ImageFont.py", line 193, in __init__
self.font = core.getfont(
OSError: cannot open resource
To overcome this error, you need to download manually, the Arial.ttf file from https://ultralytics.com/assets/Arial.ttf and paste it to the following location, on Linux:
/home/<your_pc_user>/.config/Ultralytics
On windows, paste Arial.ttf here:
C:\Windows\Fonts
The first line of the error message mentions the same thing. After this, the code runs smoothly in offline mode.
Further as mentioned at https://docs.ultralytics.com/tutorials/pytorch-hub/, any custom-trained-model other than the one uploaded at PyTorch-model-hub can be accessed by this code.
path_hubconfig = 'absolute/path/to/yolov5'
path_trained_model = 'absolute/path/to/best.pt'
model = torch.hub.load(path_hubconfig, 'custom', path=path_trained_model, source='local') # local repo
With this code, object detection is carried out by the locally saved custom-trained model. Once, the custom trained model is saved locally this piece of code access it directly avoiding any necessity of the internet.

Dataset Labeled as not found or Corrupt, but the dataset is not corrupt

I have been trying to use this Github (https://github.com/AntixK/PyTorch-VAE) and call the CelebA dataset using the config file listed. Specifically under the vae.yaml I have placed the path of the unzipped file where I have downloaded the celeba dataset (https://www.kaggle.com/jessicali9530/celeba-dataset) on my computer. And every time I run the program, I keep getting these errors:
File "/usr/local/lib/python3.6/dist-packages/torchvision/datasets/celeba.py", line 67, in init
' You can use download=True to download it')
RuntimeError: Dataset not found or corrupted. You can use download=True to download it
AttributeError: 'VAEXperiment' object has no attribute '_lazy_train_dataloader'
I have tried to download the dataset, but nothing changes. So I have no idea why the program is not running.
The run.py calls the experiment.py which uses this dataloader to retrieve the information:
def train_dataloader(self):
transform = self.data_transforms()
if self.params['dataset'] == 'celeba':
dataset = CelebA(root = self.params['data_path'],
split = "train",
transform=transform,
download=False)
else:
raise ValueError('Undefined dataset type')
self.num_train_imgs = len(dataset)
return DataLoader(dataset,
batch_size= self.params['batch_size'],
shuffle = True,
drop_last=True)
The config file grabs the information passed on the root. So what I did was upload a few files to google colab (some .jpg files) and when I run the command stated in the GItHub, python run.py -c config/vae.yaml, it states that the dataset is not found or is corrupt. I have tried this on my linux machine and the same error occurs, even when I used the downloaded and unzip link. I have gone further to attempt to change the self.params['data_path'] to the actual path and that still does not work. Any ideas what I can do?
My pytorch version is 1.6.0.
There are two issues which I have faced. The below is my solution. It is not official but it works for me. Hope the next pytorch version will update it.
Issue: Dataset not found or corrupted.'
When I checked file celeba.py in pytorch library. I found this line:
if ext not in [".zip", ".7z"] and not check_integrity(fpath, md5):
return False
This part will make self._check_integrity() return False and the program provides the message error as we got.
Solve: You can ignore this part by add "if False" immediately in front of this line
if False:
if ext not in [".zip", ".7z"] and not check_integrity(fpath, md5):
return False
celeba.py downloads dataset if you choose download=True but these two files are broken "list_landmarks_align_celeba.txt" and "list_attr_celeba.txt"
You need to find somewhere, download and replace them
Hope these solutions will help you !!!!

How to fix Python 3 PyAutoGUI screenshot error? (macOS)

I keep getting an error with any of PyAutoGUI's screenshot taking functions such as:
pyautogui.locateOnScreen('button.png')
pyautogui.pixelMatchesColor(x, y, (r, g, b))
im = pyautogui.screenshot()
The error I get is:
screencapture: cannot write file to intended destination, .screenshot2018-1009_16-43-26-003190.png
Traceback (most recent call last):
File "~/program.py", line 111, in <module>
pyautogui.locateOnScreen('/images/play!.png')
File "/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/pyscreeze/__init__.py", line 265, in locateOnScreen
screenshotIm = screenshot(region=None) # the locateAll() function must handle cropping to return accurate coordinates, so don't pass a region here.
File "/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/pyscreeze/__init__.py", line 331, in _screenshot_osx
im = Image.open(tmpFilename)
File "/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/PIL/Image.py", line 2609, in open
fp = builtins.open(filename, "rb")
FileNotFoundError: [Errno 2] No such file or directory: '.screenshot2018-1009_16-43-26-003190.png'
I don't tell it to or want it to save the new screenshotted image to any directory (and it shouldn't). With the pyautogui.screenshot() function I could manually save it to a real directory in my project, but I don't have an option to do that with the other methods. Any idea on how to fix this?
What I've tried:
I looked at all the documentation I could find online of pyautogui screenshots
Restarting computer
Downgrading versions for Pillow and pyscreeze
EDIT:
I tried it on another mac and got the same error.
Tried it on windows bootcamp (windows on my mac) and it works fine.
possible, very hack-ish fix - I don't actually like this answer but it was a quick and easy fix (done on OSX with Mojave):
PLEASE NOTE: modifying the source code of libraries you don't understand is usually a bad idea, so do so at your own risk! This worked for me, your milage may vary.
Go to your file (your file path may be different, I just copied this from your error):
/Library/Frameworks/Python.framework/Versions/3.6/lib/python3.6/site-packages/pyscreeze/__init__.py
find the line under the function "_screenshot_osx" that looks like
tmpFilename = '.screenshot%s.png' % (datetime.datetime.now().strftime('%Y-%m%d_%H-%M-%S-%f'))
copy it and then comment it out, paste the copied line directly below the commented out original and modify to something like this:
tmpFilename = r'<your preferred screenshot folder here>/screenshot%s.png' % (datetime.datetime.now().strftime('%Y-%m%d_%H-%M-%S-%f'))
save the changes, and see if it works.
Also note: pyautogui.locateOnScreen can be a bit finicky so even if this removes your error you still might not get the coordinates you want (might return none). That might be related to a different issue. To test that part I do this:
import pyautogui
pyautogui.screenshot('testFull.png')
placePos = pyautogui.locateOnScreen('testFull.png')
print(placePos)
even the cursor blinking can mess this up though, and osx has translucent user interfaces so it's kind of annoying to test this perfectly without careful image curation.
I was facing this same issue on MacOS Mojave after changing to Python 3.8.
Here is my solution.
Go the same file mentioned by #Richard W.
There, together with all your 'imports', add the following line so the script can find the tmpFilename folder
dirname = os.path.dirname(__file__)
then, replace the also mentioned line by
tmpFilename = os.path.join(dirname,r'screenshot%s.png' % (datetime.datetime.now().strftime('%Y-%m%d_%H-%M-%S-%f')))

Read NetCDF file from Azure file storage

I have uploaded a file to my Azure file storage account and created a SAS (shared access signature). Let's pretend the file in question is called fileA.nc
Now, with Python3, I am attempting to read fileA.nc:
from netCDF4 import Dataset
url ='https://<my-azure-resource-group>.file.core.windows.net/<some-file-share>/fileA.nc<SAS-token>';
dataset = Dataset(url)
print(dataset.variables.keys())
The above code does not work, instead giving me the following error:
Traceback (most recent call last): File "yadaYadaYada/test.py", line
8, in
dataset = Dataset(url) File "netCDF4/_netCDF4.pyx", line 1848, in netCDF4._netCDF4.Dataset.init (netCDF4/_netCDF4.c:13983)
OSError: NetCDF: Malformed or unexpected Constraint
This is line 8:
dataset = Dataset(url)
I know the URL provided works. If I paste it into the browser, the file downloads...
I have checked the netCDF4 documentation, which says this:
Remote OPeNDAP-hosted datasets can be accessed for reading over
http
if a URL is provided to the Dataset constructor instead of a filename.
However, this requires that the netCDF library be built with OPenDAP
support, via the --enable-dap configure option (added in version
4.0.1).
However, I have no idea how to tell if when Pycharms installed netcdf4, it used the --enable-dap argument, but I cannot imagine why it would not. Besides, if I stick in a url which points to some HTML, I get the HTML in the error dump and so from that I would think netcdf4 is actually trying to load a remote dataset and so the problem is somewhere else.
I'd really appreciate some help here. Maybe someone knows of another Python 3 netCDF library that will allow me to load my datasets from Azure?
UPDATE
Okay, I can now confirm that the python netcdf4 library does come with --OPenDAP enabled:
Hello again, netCDF4 1.0.4 with OpenDAP support is now available in
the conda respoitory on Unix. To install: $ conda install netcdf4
Ilan
I have found a solution. It turns out that you cannot read directly from an Azure File share, even though when you paste the link to a file in the browser, the file begins to download.
What I needed to do was to mount the File Share on my OS. In my case, I was using Windows but this can be done with Linux, too. The following code should be modified accordingly and then put into Command Prompt:
net use <drive-letter>: \\<storage-account-name>.file.core.windows.net\<share-name>
example :
net use z: \\samples.file.core.windows.net\logs
Once the File Share is mounted, you can read from it as if it were an external HDD. You may need to add permission, but I didn't.
Here is the link to the documentation for mounting the File Share: Documentation

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