will io direction operation lock the file? - linux

i have a growing nginx log file about 20G already, and i wish to rotate it.
1, i mv the old log file to a new log file
2, i do > old_log_file.log to truncate the old log file in about 2~3 seconds
if there's a lock(write lock?) on the old log file when i doing the truncating(about 2~3 seconds)?
at that 2~3s period, nginx returns 502 for waiting to append logs to old log file until lock released?
thank you for explaining.

On Linux, there is (almost) no mandatory file locks (more precisely, there used to be some mandatory locking feature in the kernel, but it is deprecated and you really should avoid using it). File locking happens with flock(2) or lockf(3) and is advisory and should be explicit (e.g. with flock(1) command, or some program calling flock or lockf).
So every locking related to files is practically a convention between all the software using that file (and mv(1) or the redirection by your shell don't use file locking).
Remember that a file on Linux is mostly an i-node (see inode(7)) which could have zero, one or several file paths (see path_resolution(7) and be aware of link(2), rename(2), unlink(2)) and used thru some file descriptor. Read ALP (and perhaps Operating Systems: Three Easy Pieces) for more.
No file locking happens in the scenario of your question (and the i-nodes and file descriptors involved are independent).
Consider using logrotate(8).
Some software provide a way to reload their configuration and re-open log files. You should read the documentation of your nginx.

It depends on application if it locks the file. Application that generates this log file must have option to clear log file. One example is in editor like vim file can be externally modified while it is still open in editor.

Related

When writing to a newly created file, can I create the directory entry only after writing is completed?

I'm writing a file that takes minutes to write. External software monitors for this file to appear, but unfortunately doesn't monitor for inotify IN_CLOSE_WRITE events, but rather checks periodically "the file is there" and then starts to process it, which will fail if the file is incomplete. I cannot fix the external software. A workaround I've been using so far is to write a temporary file and then rename it when it's finished, but this workaround complicates my workflow for reasons beyond the scope of this question¹.
Files are not directory entries. Using hardlinks, there can be multiple pointers to the same file. When I open a file for writing, both the inode and the directory entry are created immediately. Can I prevent this? Can I postpone the creation of the directory entry until the file is closed, rather than when the file is opened for writing?
Example Python-code, but the question is not specific to Python:
fp = open(dest, 'w') # currently both inode and directory entry are created here
fp.write(...)
fp.write(...)
fp.write(...)
fp.close() # I would like to create the directory entry only here
Reading everything into memory and then writing it all in one go is not a good solution, because writing will still take time and the file might not fit into memory.
I found the related question Is it possible to create an unlinked file on a selected filesystem?, but I would want to first create an anonymous/unnamed file, then naming it when I'm done writing (I agree with the answer there that creating an inode is unavoidable, but that's fine; I just want to postpone naming it).
Tagging this as linux, because I suspect the answer might be different between Linux and Windows and I only need a solution on Linux.
¹Many files are produced in parallel within dask graphs, and injecting a "move as soon as finished" task in our system would be complicated, so we're really renaming 50 files when 50 files have been written, which causes delays.

How to check if a file is opened in Linux?

The thing is, I want to track if a user tries to open a file on a shared account. I'm looking for any record/technique that helps me know if the concerned file is opened, at run time.
I want to create a script which monitors if the file is open, and if it is, I want it to send an alert to a particular email address. The file I'm thinking of is a regular file.
I tried using lsof | grep filename for checking if a file is open in gedit, but the command doesn't return anything.
Actually, I'm trying this for a pet project, and thus the question.
The command lsof -t filename shows the IDs of all processes that have the particular file opened. lsof -t filename | wc -w gives you the number of processes currently accessing the file.
The fact that a file has been read into an editor like gedit does not mean that the file is still open. The editor most likely opens the file, reads its contents and then closes the file. After you have edited the file you have the choice to overwrite the existing file or save as another file.
You could (in addition of other answers) use the Linux-specific inotify(7) facilities.
I am understanding that you want to track one (or a few) particular given file, with a fixed file path (actually a given i-node). E.g. you would want to track when /var/run/foobar is accessed or modified, and do something when that happens
In particular, you might want to install and use incrond(8) and configure it thru incrontab(5)
If you want to run a script when some given file (on a native local, e.g. Ext4, BTRS, ... but not NFS file system) is accessed or modified, use inotify incrond is exactly done for that purpose.
PS. AFAIK, inotify don't work well for remote network files, e.g. NFS filesystems (in particular when another NFS client machine is modifying a file).
If the files you are fond of are somehow source files, you might be interested by revision control systems (like git) or builder systems (like GNU make); in a certain way these tools are related to file modification.
You could also have the particular file system sits in some FUSE filesystem, and write your own FUSE daemon.
If you can restrict and modify the programs accessing the file, you might want to use advisory locking, e.g. flock(2), lockf(3).
Perhaps the data sitting in the file should be in some database (e.g. sqlite or a real DBMS like PostGreSQL ou MongoDB). ACID properties are important ....
Notice that the filesystem and the mount options may matter a lot.
You might want to use the stat(1) command.
It is difficult to help more without understanding the real use case and the motivation. You should avoid some XY problem
Probably, the workflow is wrong (having a shared file between several users able to write it), and you should approach the overall issue in some other way. For a pet project I would at least recommend using some advisory lock, and access & modify the information only thru your own programs (perhaps setuid) using flock (this excludes ordinary editors like gedit or commands like cat ...). However, your implicit use case seems to be well suited for a DBMS approach (a database does not have to contain a lot of data, it might be tiny), or some index locked file like GDBM library is handling.
Remember that on POSIX systems and Linux, several processes can access (and even modify) the same file simultaneously (unless you use some locking or synchronization).
Reading the Advanced Linux Programming book (freely available) would give you a broader picture (but it does not mention inotify which appeared aften the book was written).
You can use ls -lrt, it displays the last RW operations in the shell. Then you can conclude whether the file is opened or not. Make sure that you are in the exact directory.

Syncing a file system that has no file on it

Say I want to synchronize data buffers of a file system to disk (in my case the one of an USB stick partition) on a linux box.
While searching for a function to do that I found the following
DESCRIPTION
sync() causes all buffered modifications to file metadata and
data to be written to the underlying file sys‐
tems.
syncfs(int fd) is like sync(), but synchronizes just the file system
containing file referred to by the open file
descriptor fd.
But what if the file system has no file on it that I can open and pass to syncfs? Can I "abuse" the dot file? Does it appear on all file systems?
Is there another function that does what I want? Perhaps by providing a device file with major / minor numbers or some such?
Yes I think you can do that. The root directory of your file system will have at least one inode for your root directory. You can use the .-file to do that. Play also around with ls -i to see the inode numbers.
Is there a possibility to avoid your problem by mounting your file system with sync? Does performance issues hamper? Did you have a look at remounting? This can sync your file system as well in particular cases.
I do not know what your application is, but I suffered problems with synchronization of files to a USB stick with the FAT32-file system. It resulted in weird read and write errors. I can not imagine any other valid reason why you should sync an empty file system.
From man 8 sync description:
"sync writes any data buffered in memory out to disk. This can include (but is not
limited to) modified superblocks, modified inodes, and delayed reads and writes. This
must be implemented by the kernel; The sync program does nothing but exercise the sync(2)
system call."
So, note that it's all about modification (modified inode, superblocks etc). If you don't have any modification, it don't have anything to sync up.

I/O Performance in Linux

File A in a directory which have 10000 files, and file B in a directory which have 10 files, Would read/write file A slower than file B?
Would it be affected by different journaling file system?
No.
Browsing the directory and opening a file will be slower (whether or not that's noticeable in practice depends on the filesystem). Input/output on the file is exactly the same.
EDIT:
To clarify, the "file" in the directory is not really the file, but a link ("hard link", as opposed to symbolic link), which is merely a kind of name with some metadata, but otherwise unrelated to what you'd consider "the file". That's also the historical reason why deleting a file is done via the unlink syscall, not via a hypothetical deletefile call. unlink removes the link, and if that was the last link (but only then!), the file.
It is perfectly legal for one file to have a hundred links in different directories, and it is perfectly legal to open a file and then move it to a different place or even unlink it (while it remains open!). It does not affect your ability to read/write on the file descriptor in any way, even when a file (to your knowledge) does not even exist any more.
In general, once a file has been opened and you have a handle to it, the performance of accessing that file will be the same no matter how many other files are in the same directory. You may be able to detect a small difference in the time it takes to open the file, as the OS will have to search for the file name in the directory.
Journaling aims to reduce the recover time from file system crashes, IMHO, it will not affect the read/write speed of files. Journaling ext2

Is the file mutex in Linux? How to implement it?

In windows, if I open a file with MS Word, then try to delete it.
The system will stop me. It prevents the file being deleted.
There is a similar mechanism in Linux?
How can I implement it when writing my own program?
There is not a similar mechanism in Linux. I, in fact, find that feature of windows to be an incredible misfeature and a big problem.
It is not typical for a program to hold a file open that it is working on anyway unless the program is a database and updating the file as it works. Programs usually just open the file, write contents and close it when you save your document.
vim's .swp file is updated as vim works, and vim holds it open the whole time, so even if you delete it, the file doesn't really go away. vim will just lose its recovery ability if you delete the .swp file while it's running.
In Linux, if you delete a file while a process has it open, the system keeps it in existence until all references to it are gone. The name in the filesystem that refers to the file will be gone. But the file itself is still there on disk.
If the system crashes while the file is still open it will be cleaned up and removed from the disk when the system comes back up.
The reason this is such a problem in Windows is that mandatory locking frequently prevents operations that should succeed from succeeding. For example, a backup process should be able to read a file that is being written to. It shouldn't have to stop the process that is doing the writing before the backup proceeds. In many other cases, operations that should be able to move forward are blocked for silly reasons.
The semantics of most Unix filesystems (such as Linux's ext2 fs family) is that a file can be unlink(2)'d at any time, even if it is open. However, after such a call, if the file has been opened by some other process, they can continue to read and write to the file through the open file descriptor. The filesystem does not actually free the storage until all open file descriptors have been closed. These are very long-standing semantics.
You may wish to read more about file locking in Unix and Linux (e.g., the Wikipedia article on File Locking.) Basically, mandatory and advisory locks on Linux exist but they're not guaranteed to prevent what you want to prevent.

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