Unable to access hive using spark

Unable to access hive using spark - apache-spark

I'm trying to access hive through spark-shell. I'm using Windows 8.
Hive version - 2.1.1
Spark version - 2.4.0
Hadoop version - 2.7.7
To begin with I've entered following code in Spark-shell
import org.apache.spark.sql.hive.HiveContext
import org.apache.spark.sql.SparkSession
val sqlContext = new org.apache.spark.sql.hive.HiveContext(sc)
scala> sqlContext.sql("CREATE TABLE IF NOT EXISTS employees2(id INT,name STRING, age INT) ROW FORMAT DELIMITED FIELDS TERMINATED BY ',' LINES TERMINATED BY '\n'")
My hive-site.xml in the /spark/conf is as follows
<?xml version="1.0"?>
<?xml-stylesheet type="text/xsl" href="configuration.xsl"?>
<configuration><property> <name>javax.jdo.option.ConnectionURL</name>
<value>jdbc:derby://localhost:1527/metastore_db;create=true</value>
<description>JDBC connect string for a JDBC metastore</description>
</property>
<property>
<name>hive.metastore.uris</name>
<value>thrift://localhost:9083</value>
<description>URI for client to contact metastore server</description>
</property>
<property>
<name>javax.jdo.option.ConnectionDriverName</name>
<value>org.apache.derby.jdbc.ClientDriver</value>
<description>Driver class name for a JDBC metastore</description>
</property>
<property>
<name>hive.server2.enable.impersonation</name>
<description>Enable user impersonation for HiveServer2</description>
<value>true</value>
</property>
<property>
<name>hive.server2.authentication</name>
<value>NONE</value>
<description> Client authentication types. NONE: no authentication check LDAP: LDAP/AD based authentication KERBEROS: Kerberos/GSSAPI authentication CUSTOM: Custom authentication provider (Use with property hive.server2.custom.authentication.class) </description>
</property>
<property>
<name>datanucleus.autoCreateTables</name>
<value>True</value>
</property>
<property>
<name>hive.metastore.schema.verification</name>
<value>False</value>
</property>
</configuration>
Error logs that I'm getting is as follows
2018-12-26 18:34:01 WARN HiveConf:2753 - **HiveConf of name hive.server2.enable.impersonation does not exist**
2018-12-26 18:34:03 WARN metastore:428 - **Failed to connect to the MetaStore Server...**
2018-12-26 18:34:04 WARN metastore:428 - Failed to connect to the MetaStore Server...
2018-12-26 18:34:01 WARN HiveConf:2753 - HiveConf of name hive.server2.enable.impersonation does not exist
2018-12-26 18:34:03 WARN metastore:428 - Failed to connect to the MetaStore Server...
2018-12-26 18:34:04 WARN metastore:428 - Failed to connect to the MetaStore Server...
77)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.createTable(SessionCatalog.scala:311)
at org.apache.spark.sql.execution.command.CreateTableCommand.run(tables.scala:128)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult$lzycompute(commands.scala:70)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult(commands.scala:68)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.executeCollect(commands.scala:79)
at org.apache.spark.sql.Dataset$$anonfun$6.apply(Dataset.scala:195)
at org.apache.spark.sql.Dataset$$anonfun$6.apply(Dataset.scala:195)
at org.apache.spark.sql.Dataset$$anonfun$53.apply(Dataset.scala:3365)
at org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:78)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:125)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:73)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3364)
at org.apache.spark.sql.Dataset.<init>(Dataset.scala:195)
at org.apache.spark.sql.Dataset$.ofRows(Dataset.scala:80)
at org.apache.spark.sql.SparkSession.sql(SparkSession.scala:642)
at org.apache.spark.sql.SQLContext.sql(SQLContext.scala:694)
... 49 elided
Caused by: java.lang.RuntimeException: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:522)
at org.apache.spark.sql.hive.client.HiveClientImpl.newState(HiveClientImpl.scala:183)
at org.apache.spark.sql.hive.client.HiveClientImpl.<init>(HiveClientImpl.scala:117)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:272)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:384)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:286)
at org.apache.spark.sql.hive.HiveExternalCatalog.client$lzycompute(HiveExternalCatalog.scala:66)
at org.apache.spark.sql.hive.HiveExternalCatalog.client(HiveExternalCatalog.scala:65)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply$mcZ$sp(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:97)
... 75 more
Caused by: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1523)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
... 90 more
Caused by: java.lang.reflect.InvocationTargetException: org.apache.hadoop.hive.metastore.api.MetaException: Could not connect to meta store using any
of the URIs provided. Most recent failure: org.apache.thrift.transport.TTransportException: java.net.ConnectException: Connection refused: connect
at org.apache.thrift.transport.TSocket.open(TSocket.java:226)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.open(HiveMetaStoreClient.java:420)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:236)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at org.apache.spark.sql.hive.client.HiveClientImpl.newState(HiveClientImpl.scala:183)
at org.apache.spark.sql.hive.client.HiveClientImpl.<init>(HiveClientImpl.scala:117)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:272)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:384)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:286)
at org.apache.spark.sql.hive.HiveExternalCatalog.client$lzycompute(HiveExternalCatalog.scala:66)
at org.apache.spark.sql.hive.HiveExternalCatalog.client(HiveExternalCatalog.scala:65)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply$mcZ$sp(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:97)
at org.apache.spark.sql.hive.HiveExternalCatalog.databaseExists(HiveExternalCatalog.scala:214)
at org.apache.spark.sql.internal.SharedState.externalCatalog$lzycompute(SharedState.scala:114)
at org.apache.spark.sql.internal.SharedState.externalCatalog(SharedState.scala:102)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.org$apache$spark$sql$hive$HiveSessionStateBuilder$$externalCatalog(HiveSessionStateBuilde
r.scala:39)
at org.apache.spark.sql.hive.HiveSessionStateBuilder$$anonfun$1.apply(HiveSessionStateBuilder.scala:54)
at org.apache.spark.sql.hive.HiveSessionStateBuilder$$anonfun$1.apply(HiveSessionStateBuilder.scala:54)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.externalCatalog$lzycompute(SessionCatalog.scala:90)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.externalCatalog(SessionCatalog.scala:90)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.databaseExists(SessionCatalog.scala:238)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.org$apache$spark$sql$catalyst$catalog$SessionCatalog$$requireDbExists(SessionCatalog.s
cala:177)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.createTable(SessionCatalog.scala:311)
at org.apache.spark.sql.execution.command.CreateTableCommand.run(tables.scala:128)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult$lzycompute(commands.scala:70)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult(commands.scala:68)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.executeCollect(commands.scala:79)
at org.apache.spark.sql.Dataset$$anonfun$6.apply(Dataset.scala:195)
at org.apache.spark.sql.Dataset$$anonfun$6.apply(Dataset.scala:195)
at org.apache.spark.sql.Dataset$$anonfun$53.apply(Dataset.scala:3365)
at org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:78)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:125)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:73)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3364)
at org.apache.spark.sql.Dataset.<init>(Dataset.scala:195)
at org.apache.spark.sql.Dataset$.ofRows(Dataset.scala:80)
at org.apache.spark.sql.SparkSession.sql(SparkSession.scala:642)
at org.apache.spark.sql.SQLContext.sql(SQLContext.scala:694)
at <init>(<console>:28)
at <init>(<console>:33)
at <init>(<console>:35)
at <init>(<console>:37)
at <init>(<console>:39)
at <init>(<console>:41)
at <init>(<console>:43)
at <init>(<console>:45)
at <init>(<console>:47)
at .<init>(<console>:51)
at .<clinit>(<console>)
at .$print$lzycompute(<console>:7)
at .$print(<console>:6)
at $print(<console>)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at scala.tools.nsc.interpreter.IMain$ReadEvalPrint.call(IMain.scala:793)
at scala.tools.nsc.interpreter.IMain$Request.loadAndRun(IMain.scala:1054)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:645)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:644)
at scala.reflect.internal.util.ScalaClassLoader$class.asContext(ScalaClassLoader.scala:31)
at scala.reflect.internal.util.AbstractFileClassLoader.asContext(AbstractFileClassLoader.scala:19)
at scala.tools.nsc.interpreter.IMain$WrappedRequest.loadAndRunReq(IMain.scala:644)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:576)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:572)
at scala.tools.nsc.interpreter.ILoop.interpretStartingWith(ILoop.scala:819)
at scala.tools.nsc.interpreter.ILoop.command(ILoop.scala:691)
at scala.tools.nsc.interpreter.ILoop.processLine(ILoop.scala:404)
at scala.tools.nsc.interpreter.ILoop.loop(ILoop.scala:425)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply$mcZ$sp(SparkILoop.scala:285)
at org.apache.spark.repl.SparkILoop.runClosure(SparkILoop.scala:159)
at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:182)
at org.apache.spark.repl.Main$.doMain(Main.scala:78)
at org.apache.spark.repl.Main$.main(Main.scala:58)
at org.apache.spark.repl.Main.main(Main.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:849)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:167)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:195)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:86)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:924)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:933)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.net.ConnectException: Connection refused: connect
at java.net.DualStackPlainSocketImpl.waitForConnect(Native Method)
at java.net.DualStackPlainSocketImpl.socketConnect(DualStackPlainSocketImpl.java:85)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:172)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at org.apache.thrift.transport.TSocket.open(TSocket.java:221)
... 104 more
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
... 96 more
Caused by: org.apache.hadoop.hive.metastore.api.MetaException: Could not connect to meta store using any of the URIs provided. Most recent failure: or
g.apache.thrift.transport.TTransportException: java.net.ConnectException: Connection refused: connect
at org.apache.thrift.transport.TSocket.open(TSocket.java:226)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.open(HiveMetaStoreClient.java:420)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:236)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at org.apache.spark.sql.hive.client.HiveClientImpl.newState(HiveClientImpl.scala:183)
at org.apache.spark.sql.hive.client.HiveClientImpl.<init>(HiveClientImpl.scala:117)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:272)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:384)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:286)
at org.apache.spark.sql.hive.HiveExternalCatalog.client$lzycompute(HiveExternalCatalog.scala:66)
at org.apache.spark.sql.hive.HiveExternalCatalog.client(HiveExternalCatalog.scala:65)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply$mcZ$sp(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:97)
at org.apache.spark.sql.hive.HiveExternalCatalog.databaseExists(HiveExternalCatalog.scala:214)
at org.apache.spark.sql.internal.SharedState.externalCatalog$lzycompute(SharedState.scala:114)
at org.apache.spark.sql.internal.SharedState.externalCatalog(SharedState.scala:102)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.org$apache$spark$sql$hive$HiveSessionStateBuilder$$externalCatalog(HiveSessionStateBuilde
r.scala:39)
at org.apache.spark.sql.hive.HiveSessionStateBuilder$$anonfun$1.apply(HiveSessionStateBuilder.scala:54)
at org.apache.spark.sql.hive.HiveSessionStateBuilder$$anonfun$1.apply(HiveSessionStateBuilder.scala:54)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.externalCatalog$lzycompute(SessionCatalog.scala:90)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.externalCatalog(SessionCatalog.scala:90)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.databaseExists(SessionCatalog.scala:238)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.org$apache$spark$sql$catalyst$catalog$SessionCatalog$$requireDbExists(SessionCatalog.s
cala:177)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.createTable(SessionCatalog.scala:311)
at org.apache.spark.sql.execution.command.CreateTableCommand.run(tables.scala:128)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult$lzycompute(commands.scala:70)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult(commands.scala:68)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.executeCollect(commands.scala:79)
at org.apache.spark.sql.Dataset$$anonfun$6.apply(Dataset.scala:195)
at org.apache.spark.sql.Dataset$$anonfun$6.apply(Dataset.scala:195)
at org.apache.spark.sql.Dataset$$anonfun$53.apply(Dataset.scala:3365)
at org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:78)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:125)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:73)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3364)
at org.apache.spark.sql.Dataset.<init>(Dataset.scala:195)
at org.apache.spark.sql.Dataset$.ofRows(Dataset.scala:80)
at org.apache.spark.sql.SparkSession.sql(SparkSession.scala:642)
at org.apache.spark.sql.SQLContext.sql(SQLContext.scala:694)
at <init>(<console>:28)
at <init>(<console>:33)
at <init>(<console>:35)
at <init>(<console>:37)
at <init>(<console>:39)
at <init>(<console>:41)
at <init>(<console>:43)
at <init>(<console>:45)
at <init>(<console>:47)
at .<init>(<console>:51)
at .<clinit>(<console>)
at .$print$lzycompute(<console>:7)
at .$print(<console>:6)
at $print(<console>)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at scala.tools.nsc.interpreter.IMain$ReadEvalPrint.call(IMain.scala:793)
at scala.tools.nsc.interpreter.IMain$Request.loadAndRun(IMain.scala:1054)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:645)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:644)
at scala.reflect.internal.util.ScalaClassLoader$class.asContext(ScalaClassLoader.scala:31)
at scala.reflect.internal.util.AbstractFileClassLoader.asContext(AbstractFileClassLoader.scala:19)
at scala.tools.nsc.interpreter.IMain$WrappedRequest.loadAndRunReq(IMain.scala:644)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:576)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:572)
at scala.tools.nsc.interpreter.ILoop.interpretStartingWith(ILoop.scala:819)
at scala.tools.nsc.interpreter.ILoop.command(ILoop.scala:691)
at scala.tools.nsc.interpreter.ILoop.processLine(ILoop.scala:404)
at scala.tools.nsc.interpreter.ILoop.loop(ILoop.scala:425)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply$mcZ$sp(SparkILoop.scala:285)
at org.apache.spark.repl.SparkILoop.runClosure(SparkILoop.scala:159)
at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:182)
at org.apache.spark.repl.Main$.doMain(Main.scala:78)
at org.apache.spark.repl.Main$.main(Main.scala:58)
at org.apache.spark.repl.Main.main(Main.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:849)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:167)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:195)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:86)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:924)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:933)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.net.ConnectException: Connection refused: connect
at java.net.DualStackPlainSocketImpl.waitForConnect(Native Method)
at java.net.DualStackPlainSocketImpl.socketConnect(DualStackPlainSocketImpl.java:85)
at java.net.AbstractPlainSocketImpl.doConnect(AbstractPlainSocketImpl.java:350)
at java.net.AbstractPlainSocketImpl.connectToAddress(AbstractPlainSocketImpl.java:206)
at java.net.AbstractPlainSocketImpl.connect(AbstractPlainSocketImpl.java:188)
at java.net.PlainSocketImpl.connect(PlainSocketImpl.java:172)
at java.net.SocksSocketImpl.connect(SocksSocketImpl.java:392)
at java.net.Socket.connect(Socket.java:589)
at org.apache.thrift.transport.TSocket.open(TSocket.java:221)
... 104 more
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.open(HiveMetaStoreClient.java:466)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:236)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
... 101 more
How to solve it. Am I missing something or is my configuration wrong?

Related

whenever we are trying to call spark code with kerberos authentication we are getting error message as root user is not valid?

20/04/16 02:03:07 INFO metastore: Trying to connect to metastore with URI thrift://hostname.domain:9083
Kerberos username [root]: 20/04/16 02:03:07 ERROR TSaslTransport: SASL negotiation failure
javax.security.sasl.SaslException: GSS initiate failed [Caused by GSSException: No valid credentials provided (Mechanism level: Attempt to obtain new INITIATE credentials failed! (null))]
at com.sun.security.sasl.gsskerb.GssKrb5Client.evaluateChallenge(GssKrb5Client.java:211)
at org.apache.thrift.transport.TSaslClientTransport.handleSaslStartMessage(TSaslClientTransport.java:94)
at org.apache.thrift.transport.TSaslTransport.open(TSaslTransport.java:271)
at org.apache.thrift.transport.TSaslClientTransport.open(TSaslClientTransport.java:37)
at org.apache.hadoop.hive.thrift.client.TUGIAssumingTransport$1.run(TUGIAssumingTransport.java:52)
at org.apache.hadoop.hive.thrift.client.TUGIAssumingTransport$1.run(TUGIAssumingTransport.java:49)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1698)
at org.apache.hadoop.hive.thrift.client.TUGIAssumingTransport.open(TUGIAssumingTransport.java:49)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.open(HiveMetaStoreClient.java:420)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:236)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.metadata.Hive.getAllDatabases(Hive.java:1234)
at org.apache.hadoop.hive.ql.metadata.Hive.reloadFunctions(Hive.java:174)
at org.apache.hadoop.hive.ql.metadata.Hive.<clinit>(Hive.java:166)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at org.apache.spark.sql.hive.client.HiveClientImpl.newState(HiveClientImpl.scala:185)
at org.apache.spark.sql.hive.client.HiveClientImpl.<init>(HiveClientImpl.scala:118)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:271)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:384)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:286)
at org.apache.spark.sql.hive.HiveExternalCatalog.client$lzycompute(HiveExternalCatalog.scala:66)
at org.apache.spark.sql.hive.HiveExternalCatalog.client(HiveExternalCatalog.scala:65)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply$mcZ$sp(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:215)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:97)
at org.apache.spark.sql.hive.HiveExternalCatalog.databaseExists(HiveExternalCatalog.scala:214)
at org.apache.spark.sql.internal.SharedState.externalCatalog$lzycompute(SharedState.scala:114)
at org.apache.spark.sql.internal.SharedState.externalCatalog(SharedState.scala:102)
at org.apache.spark.sql.internal.SharedState.globalTempViewManager$lzycompute(SharedState.scala:141)
at org.apache.spark.sql.internal.SharedState.globalTempViewManager(SharedState.scala:136)
at org.apache.spark.sql.hive.HiveSessionStateBuilder$$anonfun$2.apply(HiveSessionStateBuilder.scala:55)
at org.apache.spark.sql.hive.HiveSessionStateBuilder$$anonfun$2.apply(HiveSessionStateBuilder.scala:55)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.globalTempViewManager$lzycompute(SessionCatalog.scala:91)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.globalTempViewManager(SessionCatalog.scala:91)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.setCurrentDatabase(SessionCatalog.scala:258)
at org.apache.spark.sql.execution.command.SetDatabaseCommand.run(databases.scala:59)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult$lzycompute(commands.scala:70)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.sideEffectResult(commands.scala:68)
at org.apache.spark.sql.execution.command.ExecutedCommandExec.executeCollect(commands.scala:79)
at org.apache.spark.sql.Dataset$$anonfun$6.apply(Dataset.scala:194)
at org.apache.spark.sql.Dataset$$anonfun$6.apply(Dataset.scala:194)
at org.apache.spark.sql.Dataset$$anonfun$52.apply(Dataset.scala:3370)
at org.apache.spark.sql.execution.SQLExecution$$anonfun$withNewExecutionId$1.apply(SQLExecution.scala:80)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:127)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:75)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3369)
at org.apache.spark.sql.Dataset.<init>(Dataset.scala:194)
at org.apache.spark.sql.Dataset$.ofRows(Dataset.scala:79)
at org.apache.spark.sql.SparkSession.sql(SparkSession.scala:642)
at com.edai.Main.Main$.main(Main.scala:50)
at comedai.Main.Main.main(Main.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:845)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:161)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:184)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:86)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:920)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:929)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: GSSException: No valid credentials provided (Mechanism level: Attempt to obtain new INITIATE credentials failed! (null))
at sun.security.jgss.krb5.Krb5InitCredential.getTgt(Krb5InitCredential.java:349)
at sun.security.jgss.krb5.Krb5InitCredential.getInstance(Krb5InitCredential.java:146)
at sun.security.jgss.krb5.Krb5MechFactory.getCredentialElement(Krb5MechFactory.java:122)
at sun.security.jgss.krb5.Krb5MechFactory.getMechanismContext(Krb5MechFactory.java:189)
at sun.security.jgss.GSSManagerImpl.getMechanismContext(GSSManagerImpl.java:224)
at sun.security.jgss.GSSContextImpl.initSecContext(GSSContextImpl.java:212)
at sun.security.jgss.GSSContextImpl.initSecContext(GSSContextImpl.java:179)
at com.sun.security.sasl.gsskerb.GssKrb5Client.evaluateChallenge(GssKrb5Client.java:192)
... 79 more
Caused by: javax.security.auth.login.LoginException: Cannot read from System.in
at com.sun.security.auth.module.Krb5LoginModule.promptForName(Krb5LoginModule.java:869)
at com.sun.security.auth.module.Krb5LoginModule.attemptAuthentication(Krb5LoginModule.java:708)
at com.sun.security.auth.module.Krb5LoginModule.login(Krb5LoginModule.java:617)
at sun.reflect.GeneratedMethodAccessor6.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at javax.security.auth.login.LoginContext.invoke(LoginContext.java:755)
at javax.security.auth.login.LoginContext.access$000(LoginContext.java:195)
at javax.security.auth.login.LoginContext$4.run(LoginContext.java:682)
at javax.security.auth.login.LoginContext$4.run(LoginContext.java:680)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.login.LoginContext.invokePriv(LoginContext.java:680)
at javax.security.auth.login.LoginContext.login(LoginContext.java:587)
at sun.security.jgss.GSSUtil.login(GSSUtil.java:258)
at sun.security.jgss.krb5.Krb5Util.getInitialTicket(Krb5Util.java:175)
at sun.security.jgss.krb5.Krb5InitCredential$1.run(Krb5InitCredential.java:341)
at sun.security.jgss.krb5.Krb5InitCredential$1.run(Krb5InitCredential.java:337)
at java.security.AccessController.doPrivileged(Native Method)
at sun.security.jgss.krb5.Krb5InitCredential.getTgt(Krb5InitCredential.java:336)

Invalid label resource request on Amazon EMR when trying to initialize a SparkContext

I got this error when trying to run the spark-shell on Amazon EMR
ERROR SparkContext: Error initializing SparkContext.
org.apache.hadoop.yarn.exceptions.InvalidLabelResourceRequestException: Invalid label resource request, cluster do not contain , label= CORE
I have restarted all YARN services and the issue remains. Can anyone help me with this?
Below is the full stack trace:
ERROR SparkContext: Error initializing SparkContext.
org.apache.hadoop.yarn.exceptions.InvalidLabelResourceRequestException: Invalid label resource request, cluster do not contain , label= CORE
at org.apache.hadoop.yarn.server.resourcemanager.scheduler.SchedulerUtils.checkQueueLabelInLabelManager(SchedulerUtils.java:347)
at org.apache.hadoop.yarn.server.resourcemanager.scheduler.SchedulerUtils.validateResourceRequest(SchedulerUtils.java:336)
at org.apache.hadoop.yarn.server.resourcemanager.scheduler.SchedulerUtils.normalizeAndValidateRequest(SchedulerUtils.java:257)
at org.apache.hadoop.yarn.server.resourcemanager.scheduler.SchedulerUtils.normalizeAndValidateRequest(SchedulerUtils.java:223)
at org.apache.hadoop.yarn.server.resourcemanager.RMAppManager.validateAndCreateResourceRequest(RMAppManager.java:402)
at org.apache.hadoop.yarn.server.resourcemanager.RMAppManager.createAndPopulateNewRMApp(RMAppManager.java:341)
at org.apache.hadoop.yarn.server.resourcemanager.RMAppManager.submitApplication(RMAppManager.java:284)
at org.apache.hadoop.yarn.server.resourcemanager.ClientRMService.submitApplication(ClientRMService.java:620)
at org.apache.hadoop.yarn.api.impl.pb.service.ApplicationClientProtocolPBServiceImpl.submitApplication(ApplicationClientProtocolPBServiceImpl.java:257)
at org.apache.hadoop.yarn.proto.ApplicationClientProtocol$ApplicationClientProtocolService$2.callBlockingMethod(ApplicationClientProtocol.java:499)
at org.apache.hadoop.ipc.ProtobufRpcEngine$Server$ProtoBufRpcInvoker.call(ProtobufRpcEngine.java:447)
at org.apache.hadoop.ipc.RPC$Server.call(RPC.java:989)
at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:850)
at org.apache.hadoop.ipc.Server$RpcCall.run(Server.java:793)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1844)
at org.apache.hadoop.ipc.Server$Handler.run(Server.java:2489)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.yarn.ipc.RPCUtil.instantiateException(RPCUtil.java:53)
at org.apache.hadoop.yarn.ipc.RPCUtil.instantiateYarnException(RPCUtil.java:75)
at org.apache.hadoop.yarn.ipc.RPCUtil.unwrapAndThrowException(RPCUtil.java:116)
at org.apache.hadoop.yarn.api.impl.pb.client.ApplicationClientProtocolPBClientImpl.submitApplication(ApplicationClientProtocolPBClientImpl.java:276)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:409)
at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeMethod(RetryInvocationHandler.java:163)
at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invoke(RetryInvocationHandler.java:155)
at org.apache.hadoop.io.retry.RetryInvocationHandler$Call.invokeOnce(RetryInvocationHandler.java:95)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:346)
at com.sun.proxy.$Proxy18.submitApplication(Unknown Source)
at org.apache.hadoop.yarn.client.api.impl.YarnClientImpl.submitApplication(YarnClientImpl.java:258)
at org.apache.spark.deploy.yarn.Client.submitApplication(Client.scala:183)
at org.apache.spark.scheduler.cluster.YarnClientSchedulerBackend.start(YarnClientSchedulerBackend.scala:57)
at org.apache.spark.scheduler.TaskSchedulerImpl.start(TaskSchedulerImpl.scala:178)
at org.apache.spark.SparkContext.<init>(SparkContext.scala:501)
at org.apache.spark.SparkContext$.getOrCreate(SparkContext.scala:2520)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$7.apply(SparkSession.scala:935)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$7.apply(SparkSession.scala:926)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession$Builder.getOrCreate(SparkSession.scala:926)
at org.apache.spark.repl.Main$.createSparkSession(Main.scala:106)
at $line3.$read$$iw$$iw.<init>(<console>:15)
at $line3.$read$$iw.<init>(<console>:43)
at $line3.$read.<init>(<console>:45)
at $line3.$read$.<init>(<console>:49)
at $line3.$read$.<clinit>(<console>)
at $line3.$eval$.$print$lzycompute(<console>:7)
at $line3.$eval$.$print(<console>:6)
at $line3.$eval.$print(<console>)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at scala.tools.nsc.interpreter.IMain$ReadEvalPrint.call(IMain.scala:793)
at scala.tools.nsc.interpreter.IMain$Request.loadAndRun(IMain.scala:1054)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:645)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:644)
at scala.reflect.internal.util.ScalaClassLoader$class.asContext(ScalaClassLoader.scala:31)
at scala.reflect.internal.util.AbstractFileClassLoader.asContext(AbstractFileClassLoader.scala:19)
at scala.tools.nsc.interpreter.IMain$WrappedRequest.loadAndRunReq(IMain.scala:644)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:576)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:572)
at scala.tools.nsc.interpreter.IMain$$anonfun$quietRun$1.apply(IMain.scala:231)
at scala.tools.nsc.interpreter.IMain$$anonfun$quietRun$1.apply(IMain.scala:231)
at scala.tools.nsc.interpreter.IMain.beQuietDuring(IMain.scala:221)
at scala.tools.nsc.interpreter.IMain.quietRun(IMain.scala:231)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1$$anonfun$apply$mcV$sp$1.apply(SparkILoop.scala:109)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1$$anonfun$apply$mcV$sp$1.apply(SparkILoop.scala:109)
at scala.collection.immutable.List.foreach(List.scala:392)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply$mcV$sp(SparkILoop.scala:109)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply(SparkILoop.scala:109)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply(SparkILoop.scala:109)
at scala.tools.nsc.interpreter.ILoop.savingReplayStack(ILoop.scala:91)
at org.apache.spark.repl.SparkILoop.initializeSpark(SparkILoop.scala:108)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1$1.apply$mcV$sp(SparkILoop.scala:211)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1$1.apply(SparkILoop.scala:199)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1$1.apply(SparkILoop.scala:199)
at scala.tools.nsc.interpreter.ILoop$$anonfun$mumly$1.apply(ILoop.scala:189)
at scala.tools.nsc.interpreter.IMain.beQuietDuring(IMain.scala:221)
at scala.tools.nsc.interpreter.ILoop.mumly(ILoop.scala:186)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1(SparkILoop.scala:199)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$startup$1$1.apply(SparkILoop.scala:267)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$startup$1$1.apply(SparkILoop.scala:247)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.withSuppressedSettings$1(SparkILoop.scala:235)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.startup$1(SparkILoop.scala:247)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply$mcZ$sp(SparkILoop.scala:282)
at org.apache.spark.repl.SparkILoop.runClosure(SparkILoop.scala:159)
at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:182)
at org.apache.spark.repl.Main$.doMain(Main.scala:78)
at org.apache.spark.repl.Main$.main(Main.scala:58)
at org.apache.spark.repl.Main.main(Main.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:849)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:167)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:195)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:86)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:924)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:933)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)

Failed to commit spark job out of CDH 6.2 servers

CDH 6.2 is deployed on 3 servers: cm01, cm02, cm03.
spark-shell --master yarn --deploy-mode client --conf spark.yarn.archive=hdfs:///share/spark-libs.jar works if I login with rd account and run command on any one of these servers.
Now I want to submit spark job from server dev01 with user rd. I copied some directories from CDH to dev01 and setup environment HADOOP_CONF_DIR and HADOOP_HOME. However, yarn always complains:
Setting default log level to "WARN".
To adjust logging level use sc.setLogLevel(newLevel). For SparkR, use setLogLevel(newLevel).
19/07/30 14:03:38 ERROR cluster.YarnClientSchedulerBackend: YARN application has exited unexpectedly with state FAILED! Check the YARN application logs for more details.
19/07/30 14:03:38 ERROR cluster.YarnClientSchedulerBackend: Diagnostics message: Uncaught exception: org.apache.spark.SparkException: Exception thrown in awaitResult:
at org.apache.spark.util.ThreadUtils$.awaitResult(ThreadUtils.scala:226)
at org.apache.spark.rpc.RpcTimeout.awaitResult(RpcTimeout.scala:75)
at org.apache.spark.rpc.RpcEnv.setupEndpointRefByURI(RpcEnv.scala:101)
at org.apache.spark.rpc.RpcEnv.setupEndpointRef(RpcEnv.scala:109)
at org.apache.spark.deploy.yarn.ApplicationMaster.runExecutorLauncher(ApplicationMaster.scala:493)
at org.apache.spark.deploy.yarn.ApplicationMaster.run(ApplicationMaster.scala:277)
at org.apache.spark.deploy.yarn.ApplicationMaster$$anon$3.run(ApplicationMaster.scala:799)
at org.apache.spark.deploy.yarn.ApplicationMaster$$anon$3.run(ApplicationMaster.scala:798)
at java.security.AccessController.doPrivileged(Native Method)
at javax.security.auth.Subject.doAs(Subject.java:422)
at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1875)
at org.apache.spark.deploy.yarn.ApplicationMaster$.main(ApplicationMaster.scala:798)
at org.apache.spark.deploy.yarn.ExecutorLauncher$.main(ApplicationMaster.scala:830)
at org.apache.spark.deploy.yarn.ExecutorLauncher.main(ApplicationMaster.scala)
Caused by: java.io.IOException: Failed to connect to iZ8vb501or059rpllhr7i9Z:35937
at org.apache.spark.network.client.TransportClientFactory.createClient(TransportClientFactory.java:250)
at org.apache.spark.network.client.TransportClientFactory.createClient(TransportClientFactory.java:192)
at org.apache.spark.rpc.netty.NettyRpcEnv.createClient(NettyRpcEnv.scala:198)
at org.apache.spark.rpc.netty.Outbox$$anon$1.call(Outbox.scala:194)
at org.apache.spark.rpc.netty.Outbox$$anon$1.call(Outbox.scala:190)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.net.UnknownHostException: iZ8vb501or059rpllhr7i9Z
at java.net.InetAddress.getAllByName0(InetAddress.java:1280)
at java.net.InetAddress.getAllByName(InetAddress.java:1192)
at java.net.InetAddress.getAllByName(InetAddress.java:1126)
at java.net.InetAddress.getByName(InetAddress.java:1076)
at org.spark_project.io.netty.util.internal.SocketUtils$8.run(SocketUtils.java:146)
at org.spark_project.io.netty.util.internal.SocketUtils$8.run(SocketUtils.java:143)
at java.security.AccessController.doPrivileged(Native Method)
at org.spark_project.io.netty.util.internal.SocketUtils.addressByName(SocketUtils.java:143)
at org.spark_project.io.netty.resolver.DefaultNameResolver.doResolve(DefaultNameResolver.java:43)
at org.spark_project.io.netty.resolver.SimpleNameResolver.resolve(SimpleNameResolver.java:63)
at org.spark_project.io.netty.resolver.SimpleNameResolver.resolve(SimpleNameResolver.java:55)
at org.spark_project.io.netty.resolver.InetSocketAddressResolver.doResolve(InetSocketAddressResolver.java:57)
at org.spark_project.io.netty.resolver.InetSocketAddressResolver.doResolve(InetSocketAddressResolver.java:32)
at org.spark_project.io.netty.resolver.AbstractAddressResolver.resolve(AbstractAddressResolver.java:108)
at org.spark_project.io.netty.bootstrap.Bootstrap.doResolveAndConnect0(Bootstrap.java:208)
at org.spark_project.io.netty.bootstrap.Bootstrap.access$000(Bootstrap.java:49)
at org.spark_project.io.netty.bootstrap.Bootstrap$1.operationComplete(Bootstrap.java:188)
at org.spark_project.io.netty.bootstrap.Bootstrap$1.operationComplete(Bootstrap.java:174)
at org.spark_project.io.netty.util.concurrent.DefaultPromise.notifyListener0(DefaultPromise.java:507)
at org.spark_project.io.netty.util.concurrent.DefaultPromise.notifyListenersNow(DefaultPromise.java:481)
at org.spark_project.io.netty.util.concurrent.DefaultPromise.notifyListeners(DefaultPromise.java:420)
at org.spark_project.io.netty.util.concurrent.DefaultPromise.trySuccess(DefaultPromise.java:104)
at org.spark_project.io.netty.channel.DefaultChannelPromise.trySuccess(DefaultChannelPromise.java:82)
at org.spark_project.io.netty.channel.AbstractChannel$AbstractUnsafe.safeSetSuccess(AbstractChannel.java:978)
at org.spark_project.io.netty.channel.AbstractChannel$AbstractUnsafe.register0(AbstractChannel.java:512)
at org.spark_project.io.netty.channel.AbstractChannel$AbstractUnsafe.access$200(AbstractChannel.java:423)
at org.spark_project.io.netty.channel.AbstractChannel$AbstractUnsafe$1.run(AbstractChannel.java:482)
at org.spark_project.io.netty.util.concurrent.AbstractEventExecutor.safeExecute(AbstractEventExecutor.java:163)
at org.spark_project.io.netty.util.concurrent.SingleThreadEventExecutor.runAllTasks(SingleThreadEventExecutor.java:403)
at org.spark_project.io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:463)
at org.spark_project.io.netty.util.concurrent.SingleThreadEventExecutor$5.run(SingleThreadEventExecutor.java:858)
at org.spark_project.io.netty.util.concurrent.DefaultThreadFactory$DefaultRunnableDecorator.run(DefaultThreadFactory.java:138)
... 1 more
19/07/30 14:03:38 WARN cluster.YarnSchedulerBackend$YarnSchedulerEndpoint: Attempted to request executors before the AM has registered!
19/07/30 14:03:38 ERROR spark.SparkContext: Error initializing SparkContext.
java.lang.IllegalStateException: Spark context stopped while waiting for backend
at org.apache.spark.scheduler.TaskSchedulerImpl.waitBackendReady(TaskSchedulerImpl.scala:818)
at org.apache.spark.scheduler.TaskSchedulerImpl.postStartHook(TaskSchedulerImpl.scala:196)
at org.apache.spark.SparkContext.<init>(SparkContext.scala:560)
at org.apache.spark.SparkContext$.getOrCreate(SparkContext.scala:2520)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$7.apply(SparkSession.scala:935)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$7.apply(SparkSession.scala:926)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession$Builder.getOrCreate(SparkSession.scala:926)
at org.apache.spark.repl.Main$.createSparkSession(Main.scala:106)
at $line3.$read$$iw$$iw.<init>(<console>:15)
at $line3.$read$$iw.<init>(<console>:43)
at $line3.$read.<init>(<console>:45)
at $line3.$read$.<init>(<console>:49)
at $line3.$read$.<clinit>(<console>)
at $line3.$eval$.$print$lzycompute(<console>:7)
at $line3.$eval$.$print(<console>:6)
at $line3.$eval.$print(<console>)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at scala.tools.nsc.interpreter.IMain$ReadEvalPrint.call(IMain.scala:793)
at scala.tools.nsc.interpreter.IMain$Request.loadAndRun(IMain.scala:1054)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:645)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:644)
at scala.reflect.internal.util.ScalaClassLoader$class.asContext(ScalaClassLoader.scala:31)
at scala.reflect.internal.util.AbstractFileClassLoader.asContext(AbstractFileClassLoader.scala:19)
at scala.tools.nsc.interpreter.IMain$WrappedRequest.loadAndRunReq(IMain.scala:644)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:576)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:572)
at scala.tools.nsc.interpreter.IMain$$anonfun$quietRun$1.apply(IMain.scala:231)
at scala.tools.nsc.interpreter.IMain$$anonfun$quietRun$1.apply(IMain.scala:231)
at scala.tools.nsc.interpreter.IMain.beQuietDuring(IMain.scala:221)
at scala.tools.nsc.interpreter.IMain.quietRun(IMain.scala:231)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1$$anonfun$apply$mcV$sp$1.apply(SparkILoop.scala:109)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1$$anonfun$apply$mcV$sp$1.apply(SparkILoop.scala:109)
at scala.collection.immutable.List.foreach(List.scala:392)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply$mcV$sp(SparkILoop.scala:109)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply(SparkILoop.scala:109)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply(SparkILoop.scala:109)
at scala.tools.nsc.interpreter.ILoop.savingReplayStack(ILoop.scala:91)
at org.apache.spark.repl.SparkILoop.initializeSpark(SparkILoop.scala:108)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1$1.apply$mcV$sp(SparkILoop.scala:211)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1$1.apply(SparkILoop.scala:199)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1$1.apply(SparkILoop.scala:199)
at scala.tools.nsc.interpreter.ILoop$$anonfun$mumly$1.apply(ILoop.scala:189)
at scala.tools.nsc.interpreter.IMain.beQuietDuring(IMain.scala:221)
at scala.tools.nsc.interpreter.ILoop.mumly(ILoop.scala:186)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1(SparkILoop.scala:199)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$startup$1$1.apply(SparkILoop.scala:267)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$startup$1$1.apply(SparkILoop.scala:247)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.withSuppressedSettings$1(SparkILoop.scala:235)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.startup$1(SparkILoop.scala:247)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply$mcZ$sp(SparkILoop.scala:282)
at org.apache.spark.repl.SparkILoop.runClosure(SparkILoop.scala:159)
at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:182)
at org.apache.spark.repl.Main$.doMain(Main.scala:78)
at org.apache.spark.repl.Main$.main(Main.scala:58)
at org.apache.spark.repl.Main.main(Main.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:849)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:167)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:195)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:86)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:924)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:933)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
19/07/30 14:03:38 ERROR repl.Main: Failed to initialize Spark session.
java.lang.IllegalStateException: Spark context stopped while waiting for backend
at org.apache.spark.scheduler.TaskSchedulerImpl.waitBackendReady(TaskSchedulerImpl.scala:818)
at org.apache.spark.scheduler.TaskSchedulerImpl.postStartHook(TaskSchedulerImpl.scala:196)
at org.apache.spark.SparkContext.<init>(SparkContext.scala:560)
at org.apache.spark.SparkContext$.getOrCreate(SparkContext.scala:2520)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$7.apply(SparkSession.scala:935)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$7.apply(SparkSession.scala:926)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession$Builder.getOrCreate(SparkSession.scala:926)
at org.apache.spark.repl.Main$.createSparkSession(Main.scala:106)
at $line3.$read$$iw$$iw.<init>(<console>:15)
at $line3.$read$$iw.<init>(<console>:43)
at $line3.$read.<init>(<console>:45)
at $line3.$read$.<init>(<console>:49)
at $line3.$read$.<clinit>(<console>)
at $line3.$eval$.$print$lzycompute(<console>:7)
at $line3.$eval$.$print(<console>:6)
at $line3.$eval.$print(<console>)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at scala.tools.nsc.interpreter.IMain$ReadEvalPrint.call(IMain.scala:793)
at scala.tools.nsc.interpreter.IMain$Request.loadAndRun(IMain.scala:1054)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:645)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:644)
at scala.reflect.internal.util.ScalaClassLoader$class.asContext(ScalaClassLoader.scala:31)
at scala.reflect.internal.util.AbstractFileClassLoader.asContext(AbstractFileClassLoader.scala:19)
at scala.tools.nsc.interpreter.IMain$WrappedRequest.loadAndRunReq(IMain.scala:644)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:576)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:572)
at scala.tools.nsc.interpreter.IMain$$anonfun$quietRun$1.apply(IMain.scala:231)
at scala.tools.nsc.interpreter.IMain$$anonfun$quietRun$1.apply(IMain.scala:231)
at scala.tools.nsc.interpreter.IMain.beQuietDuring(IMain.scala:221)
at scala.tools.nsc.interpreter.IMain.quietRun(IMain.scala:231)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1$$anonfun$apply$mcV$sp$1.apply(SparkILoop.scala:109)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1$$anonfun$apply$mcV$sp$1.apply(SparkILoop.scala:109)
at scala.collection.immutable.List.foreach(List.scala:392)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply$mcV$sp(SparkILoop.scala:109)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply(SparkILoop.scala:109)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply(SparkILoop.scala:109)
at scala.tools.nsc.interpreter.ILoop.savingReplayStack(ILoop.scala:91)
at org.apache.spark.repl.SparkILoop.initializeSpark(SparkILoop.scala:108)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1$1.apply$mcV$sp(SparkILoop.scala:211)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1$1.apply(SparkILoop.scala:199)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1$1.apply(SparkILoop.scala:199)
at scala.tools.nsc.interpreter.ILoop$$anonfun$mumly$1.apply(ILoop.scala:189)
at scala.tools.nsc.interpreter.IMain.beQuietDuring(IMain.scala:221)
at scala.tools.nsc.interpreter.ILoop.mumly(ILoop.scala:186)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.org$apache$spark$repl$SparkILoop$$anonfun$$loopPostInit$1(SparkILoop.scala:199)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$startup$1$1.apply(SparkILoop.scala:267)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1$$anonfun$startup$1$1.apply(SparkILoop.scala:247)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.withSuppressedSettings$1(SparkILoop.scala:235)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.startup$1(SparkILoop.scala:247)
at org.apache.spark.repl.SparkILoop$$anonfun$process$1.apply$mcZ$sp(SparkILoop.scala:282)
at org.apache.spark.repl.SparkILoop.runClosure(SparkILoop.scala:159)
at org.apache.spark.repl.SparkILoop.process(SparkILoop.scala:182)
at org.apache.spark.repl.Main$.doMain(Main.scala:78)
at org.apache.spark.repl.Main$.main(Main.scala:58)
at org.apache.spark.repl.Main.main(Main.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:849)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:167)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:195)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:86)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:924)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:933)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
It seems RPC timeout exception. I have no clue to fix it. Please help. Thank you in advance.

Cannot execute this Scala application via dse spark-submit

I am trying to use the following command from a DSE client node in order to send a Scala application fat-jar to a single-node Datastax environment.
dse -u cassandra -p <password> spark-submit --class my.package.bde.TestSparkApp target/big-data-engine-0.0.1-jar-with-dependencies.jar --master dse://10.0.0.4?
Also, in the /etc/dse/spark-defaults.conf , among others, I have put the following line:
spark.cassandra.connection.host 10.0.0.4
spark.cassandra.auth.username cassandra
spark.cassandra.auth.password <pass>
com.datastax.bdp.fs.client.authentication.basic.username cassandra
com.datastax.bdp.fs.client.authentication.basic.password <pass>
However, the output of the command is the following.
Anybody knows how it could be fixed?
WARN 2019-05-24 09:01:58,116 com.datastax.driver.core.NettyUtil: Found Netty's native epoll transport in the classpath, but epoll is not available. Using NIO instead.
java.lang.NoSuchMethodError: Method io.netty.channel.epoll.NativeStaticallyReferencedJniMethods.efdnonblock()I name or signature does not match
at java.lang.ClassLoader$NativeLibrary.load(Native Method)
at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1941)
at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1824)
at java.lang.Runtime.load0(Runtime.java:809)
at java.lang.System.load(System.java:1086)
WARN 2019-05-24 09:02:02,079 hive.ql.metadata.Hive: Failed to access metastore. This class should not accessed in runtime.
org.apache.hadoop.hive.ql.metadata.HiveException: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at org.apache.hadoop.hive.ql.metadata.Hive.getAllDatabases(Hive.java:1236)
at org.apache.hadoop.hive.ql.metadata.Hive.reloadFunctions(Hive.java:174)
at org.apache.hadoop.hive.ql.metadata.Hive.<clinit>(Hive.java:166)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at org.apache.spark.sql.hive.client.HiveClientImpl.<init>(HiveClientImpl.scala:191)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:264)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:362)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:266)
at org.apache.spark.sql.hive.HiveExternalCatalog.client$lzycompute(HiveExternalCatalog.scala:66)
at org.apache.spark.sql.hive.HiveExternalCatalog.client(HiveExternalCatalog.scala:65)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply$mcZ$sp(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:97)
at org.apache.spark.sql.hive.HiveExternalCatalog.databaseExists(HiveExternalCatalog.scala:194)
at org.apache.spark.sql.internal.SharedState.externalCatalog$lzycompute(SharedState.scala:105)
at org.apache.spark.sql.internal.SharedState.externalCatalog(SharedState.scala:93)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.externalCatalog(HiveSessionStateBuilder.scala:39)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog$lzycompute(HiveSessionStateBuilder.scala:54)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog(HiveSessionStateBuilder.scala:52)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog(HiveSessionStateBuilder.scala:35)
at org.apache.spark.sql.internal.BaseSessionStateBuilder.build(BaseSessionStateBuilder.scala:289)
at org.apache.spark.sql.SparkSession$.org$apache$spark$sql$SparkSession$$instantiateSessionState(SparkSession.scala:1059)
at org.apache.spark.sql.SparkSession$$anonfun$sessionState$2.apply(SparkSession.scala:137)
at org.apache.spark.sql.SparkSession$$anonfun$sessionState$2.apply(SparkSession.scala:136)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession.sessionState$lzycompute(SparkSession.scala:136)
at org.apache.spark.sql.SparkSession.sessionState(SparkSession.scala:133)
at org.apache.spark.sql.Dataset.<init>(Dataset.scala:171)
at org.apache.spark.sql.Dataset$.apply(Dataset.scala:62)
at org.apache.spark.sql.SparkSession.createDataset(SparkSession.scala:466)
at org.apache.spark.sql.SQLContext.createDataset(SQLContext.scala:377)
at org.apache.spark.sql.SQLImplicits.localSeqToDatasetHolder(SQLImplicits.scala:213)
at tech.metis.bde.TestSparkApp$.delayedEndpoint$tech$metis$bde$TestSparkApp$1(TestSparkApp.scala:35)
at tech.metis.bde.TestSparkApp$delayedInit$body.apply(TestSparkApp.scala:20)
at scala.Function0$class.apply$mcV$sp(Function0.scala:34)
at scala.runtime.AbstractFunction0.apply$mcV$sp(AbstractFunction0.scala:12)
at scala.App$$anonfun$main$1.apply(App.scala:76)
at scala.App$$anonfun$main$1.apply(App.scala:76)
at scala.collection.immutable.List.foreach(List.scala:381)
at scala.collection.generic.TraversableForwarder$class.foreach(TraversableForwarder.scala:35)
at scala.App$class.main(App.scala:76)
at tech.metis.bde.TestSparkApp$.main(TestSparkApp.scala:20)
at tech.metis.bde.TestSparkApp.main(TestSparkApp.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.DseSparkSubmit$.org$apache$spark$deploy$DseSparkSubmit$$runMain(DseSparkSubmit.scala:662)
at org.apache.spark.deploy.DseSparkSubmit$.doRunMain$1(DseSparkSubmit.scala:167)
at org.apache.spark.deploy.DseSparkSubmit$.submit(DseSparkSubmit.scala:192)
at org.apache.spark.deploy.DseSparkSubmit$.main(DseSparkSubmit.scala:106)
at org.apache.spark.deploy.DseSparkSubmitBootstrapper$.main(DseSparkSubmitBootstrapper.scala:106)
at org.apache.spark.deploy.DseSparkSubmitBootstrapper.main(DseSparkSubmitBootstrapper.scala)
Caused by: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1523)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.metadata.Hive.getAllDatabases(Hive.java:1234)
... 57 common frames omitted
Caused by: java.lang.reflect.InvocationTargetException: null
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
... 63 common frames omitted
Caused by: org.apache.hadoop.hive.metastore.api.MetaException: Got exception: com.datastax.bdp.fs.client.DseFsConnectionException Could not connect to DSEFS. Last endpoint tried: 10.0.0.4:5598
at org.apache.hadoop.hive.metastore.MetaStoreUtils.logAndThrowMetaException(MetaStoreUtils.java:1213)
at org.apache.hadoop.hive.metastore.Warehouse.getFs(Warehouse.java:106)
at org.apache.hadoop.hive.metastore.Warehouse.getDnsPath(Warehouse.java:140)
at org.apache.hadoop.hive.metastore.Warehouse.getDnsPath(Warehouse.java:146)
at org.apache.hadoop.hive.metastore.Warehouse.getWhRoot(Warehouse.java:159)
at org.apache.hadoop.hive.metastore.Warehouse.getDefaultDatabasePath(Warehouse.java:177)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB_core(HiveMetaStore.java:601)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:620)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
... 68 common frames omitted
WARN 2019-05-24 09:02:02,216 io.netty.channel.ChannelInitializer: Failed to initialize a channel. Closing: [id: 0x61f0844e]
java.lang.VerifyError: Bad invokespecial instruction: current class isn't assignable to reference class.
Exception Details:
Location:
com/datastax/bdp/fs/rest/client/StartTlsClientHandler.decode(Lio/netty/channel/ChannelHandlerContext;Lio/netty/handler/codec/http/HttpObject;Ljava/util/List;)V #4: invokespecial
Reason:
Error exists in the bytecode
Bytecode:
0x0000000: 2a2b 2c2d b701 72b2 003c 2db9 0178 0100
0x0000010: 04a3 0007 04a7 0004 03b6 017b 2db9 017e
0x0000020: 0100 9a00 1c2d 03b9 0181 0200 c001 373a
0x0000030: 042d b901 8401 002a 2b19 04b7 0186 b1
Stackmap Table:
same_locals_1_stack_item_frame(#24,Object[#56])
full_frame(#25,{Object[#2],Object[#80],Object[#396],Object[#372]},{Object[#56],Integer})
same_frame(#62)
at com.datastax.bdp.fs.rest.client.RestClientConnection$ClientChannelInitializer.initChannel(RestClientConnection.scala:568)
at com.datastax.bdp.fs.rest.client.RestClientConnection$ClientChannelInitializer.initChannel(RestClientConnection.scala:563)
ERROR 2019-05-24 09:02:04,434 hive.log: Got exception: com.datastax.bdp.fs.client.DseFsConnectionException Could not connect to DSEFS. Last endpoint tried: 10.0.0.4:5598
com.datastax.bdp.fs.client.DseFsConnectionException: Could not connect to DSEFS. Last endpoint tried: 10.0.0.4:5598
at com.datastax.bdp.fs.client.RestClientProxy.<init>(RestClientProxy.scala:159)
at com.datastax.bdp.fs.client.DseFsClient.liftedTree1$1(DseFsClient.scala:62)
at com.datastax.bdp.fs.client.DseFsClient.<init>(DseFsClient.scala:62)
at com.datastax.bdp.fs.hadoop.DseFileSystem.initialize(DseFileSystem.scala:118)
at org.apache.hadoop.fs.FileSystem.createFileSystem(FileSystem.java:2653)
at org.apache.hadoop.fs.FileSystem.access$200(FileSystem.java:92)
at org.apache.hadoop.fs.FileSystem$Cache.getInternal(FileSystem.java:2687)
at org.apache.hadoop.fs.FileSystem$Cache.get(FileSystem.java:2669)
at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:371)
at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:362)
at org.apache.hadoop.fs.Path.getFileSystem(Path.java:295)
at org.apache.hadoop.hive.metastore.Warehouse.getFs(Warehouse.java:104)
at org.apache.hadoop.hive.metastore.Warehouse.getDnsPath(Warehouse.java:140)
at org.apache.hadoop.hive.metastore.Warehouse.getDnsPath(Warehouse.java:146)
at org.apache.hadoop.hive.metastore.Warehouse.getWhRoot(Warehouse.java:159)
at org.apache.hadoop.hive.metastore.Warehouse.getDefaultDatabasePath(Warehouse.java:177)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB_core(HiveMetaStore.java:601)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:620)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at org.apache.spark.sql.hive.client.HiveClientImpl.<init>(HiveClientImpl.scala:191)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:264)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:362)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:266)
at org.apache.spark.sql.hive.HiveExternalCatalog.client$lzycompute(HiveExternalCatalog.scala:66)
at org.apache.spark.sql.hive.HiveExternalCatalog.client(HiveExternalCatalog.scala:65)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply$mcZ$sp(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:97)
at org.apache.spark.sql.hive.HiveExternalCatalog.databaseExists(HiveExternalCatalog.scala:194)
at org.apache.spark.sql.internal.SharedState.externalCatalog$lzycompute(SharedState.scala:105)
at org.apache.spark.sql.internal.SharedState.externalCatalog(SharedState.scala:93)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.externalCatalog(HiveSessionStateBuilder.scala:39)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog$lzycompute(HiveSessionStateBuilder.scala:54)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog(HiveSessionStateBuilder.scala:52)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog(HiveSessionStateBuilder.scala:35)
at org.apache.spark.sql.internal.BaseSessionStateBuilder.build(BaseSessionStateBuilder.scala:289)
at org.apache.spark.sql.SparkSession$.org$apache$spark$sql$SparkSession$$instantiateSessionState(SparkSession.scala:1059)
at org.apache.spark.sql.SparkSession$$anonfun$sessionState$2.apply(SparkSession.scala:137)
at org.apache.spark.sql.SparkSession$$anonfun$sessionState$2.apply(SparkSession.scala:136)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession.sessionState$lzycompute(SparkSession.scala:136)
at org.apache.spark.sql.SparkSession.sessionState(SparkSession.scala:133)
at org.apache.spark.sql.Dataset.<init>(Dataset.scala:171)
at org.apache.spark.sql.Dataset$.apply(Dataset.scala:62)
at org.apache.spark.sql.SparkSession.createDataset(SparkSession.scala:466)
at org.apache.spark.sql.SQLContext.createDataset(SQLContext.scala:377)
at org.apache.spark.sql.SQLImplicits.localSeqToDatasetHolder(SQLImplicits.scala:213)
at tech.metis.bde.TestSparkApp$.delayedEndpoint$tech$metis$bde$TestSparkApp$1(TestSparkApp.scala:35)
at tech.metis.bde.TestSparkApp$delayedInit$body.apply(TestSparkApp.scala:20)
at scala.Function0$class.apply$mcV$sp(Function0.scala:34)
at scala.runtime.AbstractFunction0.apply$mcV$sp(AbstractFunction0.scala:12)
at scala.App$$anonfun$main$1.apply(App.scala:76)
at scala.App$$anonfun$main$1.apply(App.scala:76)
at scala.collection.immutable.List.foreach(List.scala:381)
at scala.collection.generic.TraversableForwarder$class.foreach(TraversableForwarder.scala:35)
at scala.App$class.main(App.scala:76)
at tech.metis.bde.TestSparkApp$.main(TestSparkApp.scala:20)
at tech.metis.bde.TestSparkApp.main(TestSparkApp.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.DseSparkSubmit$.org$apache$spark$deploy$DseSparkSubmit$$runMain(DseSparkSubmit.scala:662)
at org.apache.spark.deploy.DseSparkSubmit$.doRunMain$1(DseSparkSubmit.scala:167)
at org.apache.spark.deploy.DseSparkSubmit$.submit(DseSparkSubmit.scala:192)
at org.apache.spark.deploy.DseSparkSubmit$.main(DseSparkSubmit.scala:106)
at org.apache.spark.deploy.DseSparkSubmitBootstrapper$.main(DseSparkSubmitBootstrapper.scala:106)
at org.apache.spark.deploy.DseSparkSubmitBootstrapper.main(DseSparkSubmitBootstrapper.scala)
Caused by: com.datastax.bdp.fs.rest.client.RestConnectException: Failed to open connection to 10.0.0.4:5598
at com.datastax.bdp.fs.rest.client.RestClientConnection$$anonfun$2.applyO
io.netty.util.concurrent.SingleThreadEventExecutor.runAllTasks(SingleThreadEventExecutor.java:405)
at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:500)
at io.netty.util.concurrent.SingleThreadEventExecutor$5.run(SingleThreadEventExecutor.java:906)
at io.netty.util.internal.ThreadExecutorMap$2.run(ThreadExecutorMap.java:74)
at java.lang.Thread.run(Thread.java:748)
Caused by: io.netty.channel.ExtendedClosedChannelException: null
at io.netty.channel.AbstractChannel$AbstractUnsafe.ensureOpen(...)(Unknown Source)
ERROR 2019-05-24 09:02:04,438 hive.log: Converting exception to MetaException
Exception in thread "main" java.lang.IllegalArgumentException: Error while instantiating 'org.apache.spark.sql.hive.HiveSessionStateBuilder':
at org.apache.spark.sql.SparkSession$.org$apache$spark$sql$SparkSession$$instantiateSessionState(SparkSession.scala:1062)
at org.apache.spark.sql.SparkSession$$anonfun$sessionState$2.apply(SparkSession.scala:137)
at org.apache.spark.sql.SparkSession$$anonfun$sessionState$2.apply(SparkSession.scala:136)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession.sessionState$lzycompute(SparkSession.scala:136)
at org.apache.spark.sql.SparkSession.sessionState(SparkSession.scala:133)
at org.apache.spark.sql.Dataset.<init>(Dataset.scala:171)
at org.apache.spark.sql.Dataset$.apply(Dataset.scala:62)
at org.apache.spark.sql.SparkSession.createDataset(SparkSession.scala:466)
at org.apache.spark.sql.SQLContext.createDataset(SQLContext.scala:377)
at org.apache.spark.sql.SQLImplicits.localSeqToDatasetHolder(SQLImplicits.scala:213)
at tech.metis.bde.TestSparkApp$.delayedEndpoint$tech$metis$bde$TestSparkApp$1(TestSparkApp.scala:35)
at tech.metis.bde.TestSparkApp$delayedInit$body.apply(TestSparkApp.scala:20)
at scala.Function0$class.apply$mcV$sp(Function0.scala:34)
at scala.runtime.AbstractFunction0.apply$mcV$sp(AbstractFunction0.scala:12)
at scala.App$$anonfun$main$1.apply(App.scala:76)
at scala.App$$anonfun$main$1.apply(App.scala:76)
at scala.collection.immutable.List.foreach(List.scala:381)
at scala.collection.generic.TraversableForwarder$class.foreach(TraversableForwarder.scala:35)
at scala.App$class.main(App.scala:76)
at tech.metis.bde.TestSparkApp$.main(TestSparkApp.scala:20)
at tech.metis.bde.TestSparkApp.main(TestSparkApp.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.DseSparkSubmit$.org$apache$spark$deploy$DseSparkSubmit$$runMain(DseSparkSubmit.scala:662)
at org.apache.spark.deploy.DseSparkSubmit$.doRunMain$1(DseSparkSubmit.scala:167)
at org.apache.spark.deploy.DseSparkSubmit$.submit(DseSparkSubmit.scala:192)
at org.apache.spark.deploy.DseSparkSubmit$.main(DseSparkSubmit.scala:106)
at org.apache.spark.deploy.DseSparkSubmitBootstrapper$.main(DseSparkSubmitBootstrapper.scala:106)
at org.apache.spark.deploy.DseSparkSubmitBootstrapper.main(DseSparkSubmitBootstrapper.scala)
Caused by: org.apache.spark.sql.AnalysisException: java.lang.RuntimeException: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient;
Caused by: java.lang.RuntimeException: Unable to instantiate org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1523)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
... 54 more
Caused by: java.lang.reflect.InvocationTargetException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
... 60 more
Caused by: MetaException(message:Got exception: com.datastax.bdp.fs.client.DseFsConnectionException Could not connect to DSEFS. Last endpoint tried: 10.0.0.4:5598)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.logAndThrowMetaException(MetaStoreUtils.java:1213)
at org.apache.hadoop.hive.metastore.Warehouse.getFs(Warehouse.java:106)
at org.apache.hadoop.hive.metastore.Warehouse.getDnsPath(Warehouse.java:140)
at org.apache.hadoop.hive.metastore.Warehouse.getDnsPath(Warehouse.java:146)
at org.apache.hadoop.hive.metastore.Warehouse.getWhRoot(Warehouse.java:159)
at org.apache.hadoop.hive.metastore.Warehouse.getDefaultDatabasePath(Warehouse.java:177)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB_core(HiveMetaStore.java:601)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:620)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
... 65 more
A part of the output has been ommitted.

The most probable problem is that you have compiled your fat jar with Spark or Scala versions that are different that is used by DSE, so it has incompatible components.
Usually, it's enough to specify only following dependency in your build file (it's located in DataStax repository):
<dependency>
<groupId>com.datastax.dse</groupId>
<artifactId>dse-spark-dependencies</artifactId>
<version>6.0.7</version>
<scope>provided</scope>
</dependency>
and that's all (of course, you need to add your application dependencies) - just compile, get jar file, and run. You can find more examples of building for DSE in DataStax repo.
Also, please note that everything that you're specifying after the name of the jar file is treated as application parameters, so you may need to move --master before name of jar file

Exception when starting spark-shell : Exception thrown obtaining schema column information from datastore

I'm using Spark 2.1.1. with mysql as aa backend for the metastore.
At the starting of my spark-shell, I encounter this exception :
17/10/17 21:02:58 WARN Query: Query for candidates of org.apache.hadoop.hive.metastore.model.MTableColumnStatistics and subclasses resulted in no possible candidates
Exception thrown obtaining schema column information from datastore
org.datanucleus.exceptions.NucleusDataStoreException: Exception thrown obtaining schema column information from datastore
at org.datanucleus.store.rdbms.schema.RDBMSSchemaHandler.refreshTableData(RDBMSSchemaHandler.java:986)
at org.datanucleus.store.rdbms.schema.RDBMSSchemaHandler.getRDBMSTableInfoForTable(RDBMSSchemaHandler.java:821)
at org.datanucleus.store.rdbms.schema.RDBMSSchemaHandler.getRDBMSTableInfoForTable(RDBMSSchemaHandler.java:770)
at org.datanucleus.store.rdbms.schema.RDBMSSchemaHandler.getSchemaData(RDBMSSchemaHandler.java:206)
at org.datanucleus.store.rdbms.RDBMSStoreManager.getColumnInfoForTable(RDBMSStoreManager.java:2378)
at org.datanucleus.store.rdbms.table.TableImpl.validateColumns(TableImpl.java:215)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.performTablesValidation(RDBMSStoreManager.java:3393)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.addClassTablesAndValidate(RDBMSStoreManager.java:3190)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.run(RDBMSStoreManager.java:2841)
at org.datanucleus.store.rdbms.AbstractSchemaTransaction.execute(AbstractSchemaTransaction.java:122)
at org.datanucleus.store.rdbms.RDBMSStoreManager.addClasses(RDBMSStoreManager.java:1605)
at org.datanucleus.store.AbstractStoreManager.addClass(AbstractStoreManager.java:954)
at org.datanucleus.store.rdbms.RDBMSStoreManager.getDatastoreClass(RDBMSStoreManager.java:679)
at org.datanucleus.store.rdbms.query.RDBMSQueryUtils.getStatementForCandidates(RDBMSQueryUtils.java:408)
at org.datanucleus.store.rdbms.query.JDOQLQuery.compileQueryFull(JDOQLQuery.java:947)
at org.datanucleus.store.rdbms.query.JDOQLQuery.compileInternal(JDOQLQuery.java:370)
at org.datanucleus.store.query.Query.executeQuery(Query.java:1744)
at org.datanucleus.store.query.Query.executeWithArray(Query.java:1672)
at org.datanucleus.store.query.Query.execute(Query.java:1654)
at org.datanucleus.api.jdo.JDOQuery.execute(JDOQuery.java:221)
at org.apache.hadoop.hive.metastore.MetaStoreDirectSql.ensureDbInit(MetaStoreDirectSql.java:184)
at org.apache.hadoop.hive.metastore.MetaStoreDirectSql.<init>(MetaStoreDirectSql.java:137)
at org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:295)
at org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:258)
at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:76)
at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:136)
at org.apache.hadoop.hive.metastore.RawStoreProxy.<init>(RawStoreProxy.java:57)
at org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:66)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:593)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:571)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:620)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at org.apache.spark.sql.hive.client.HiveClientImpl.<init>(HiveClientImpl.scala:188)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:264)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:358)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:262)
at org.apache.spark.sql.hive.HiveExternalCatalog.<init>(HiveExternalCatalog.scala:66)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.internal.SharedState$.org$apache$spark$sql$internal$SharedState$$reflect(SharedState.scala:166)
at org.apache.spark.sql.internal.SharedState.<init>(SharedState.scala:86)
at org.apache.spark.sql.SparkSession$$anonfun$sharedState$1.apply(SparkSession.scala:101)
at org.apache.spark.sql.SparkSession$$anonfun$sharedState$1.apply(SparkSession.scala:101)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession.sharedState$lzycompute(SparkSession.scala:101)
at org.apache.spark.sql.SparkSession.sharedState(SparkSession.scala:100)
at org.apache.spark.sql.internal.SessionState.<init>(SessionState.scala:157)
at org.apache.spark.sql.hive.HiveSessionState.<init>(HiveSessionState.scala:32)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.SparkSession$.org$apache$spark$sql$SparkSession$$reflect(SparkSession.scala:978)
at org.apache.spark.sql.SparkSession.sessionState$lzycompute(SparkSession.scala:110)
at org.apache.spark.sql.SparkSession.sessionState(SparkSession.scala:109)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$getOrCreate$5.apply(SparkSession.scala:878)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$getOrCreate$5.apply(SparkSession.scala:878)
at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:99)
at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:99)
at scala.collection.mutable.HashTable$class.foreachEntry(HashTable.scala:230)
at scala.collection.mutable.HashMap.foreachEntry(HashMap.scala:40)
at scala.collection.mutable.HashMap.foreach(HashMap.scala:99)
at org.apache.spark.sql.SparkSession$Builder.getOrCreate(SparkSession.scala:878)
at org.apache.spark.repl.Main$.createSparkSession(Main.scala:96)
at $line3.$read$$iw$$iw.<init>(<console>:15)
at $line3.$read$$iw.<init>(<console>:42)
at $line3.$read.<init>(<console>:44)
at $line3.$read$.<init>(<console>:48)
at $line3.$read$.<clinit>(<console>)
at $line3.$eval$.$print$lzycompute(<console>:7)
at $line3.$eval$.$print(<console>:6)
at $line3.$eval.$print(<console>)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at scala.tools.nsc.interpreter.IMain$ReadEvalPrint.call(IMain.scala:786)
at scala.tools.nsc.interpreter.IMain$Request.loadAndRun(IMain.scala:1047)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:638)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:637)
at scala.reflect.internal.util.ScalaClassLoader$class.asContext(ScalaClassLoader.scala:31)
at scala.reflect.internal.util.AbstractFileClassLoader.asContext(AbstractFileClassLoader.scala:19)
at scala.tools.nsc.interpreter.IMain$WrappedRequest.loadAndRunReq(IMain.scala:637)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:569)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:565)
at scala.tools.nsc.interpreter.ILoop.interpretStartingWith(ILoop.scala:807)
at scala.tools.nsc.interpreter.ILoop.command(ILoop.scala:681)
at scala.tools.nsc.interpreter.ILoop.processLine(ILoop.scala:395)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply$mcV$sp(SparkILoop.scala:38)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply(SparkILoop.scala:37)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply(SparkILoop.scala:37)
at scala.tools.nsc.interpreter.IMain.beQuietDuring(IMain.scala:214)
at org.apache.spark.repl.SparkILoop.initializeSpark(SparkILoop.scala:37)
at org.apache.spark.repl.SparkILoop.loadFiles(SparkILoop.scala:105)
at scala.tools.nsc.interpreter.ILoop$$anonfun$process$1.apply$mcZ$sp(ILoop.scala:920)
at scala.tools.nsc.interpreter.ILoop$$anonfun$process$1.apply(ILoop.scala:909)
at scala.tools.nsc.interpreter.ILoop$$anonfun$process$1.apply(ILoop.scala:909)
at scala.reflect.internal.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:97)
at scala.tools.nsc.interpreter.ILoop.process(ILoop.scala:909)
at org.apache.spark.repl.Main$.doMain(Main.scala:69)
at org.apache.spark.repl.Main$.main(Main.scala:52)
at org.apache.spark.repl.Main.main(Main.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:743)
at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:187)
at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:212)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:126)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.sql.SQLException: Column name pattern can not be NULL or empty.
at com.mysql.cj.jdbc.exceptions.SQLError.createSQLException(SQLError.java:545)
at com.mysql.cj.jdbc.exceptions.SQLError.createSQLException(SQLError.java:513)
at com.mysql.cj.jdbc.exceptions.SQLError.createSQLException(SQLError.java:505)
at com.mysql.cj.jdbc.exceptions.SQLError.createSQLException(SQLError.java:479)
at com.mysql.cj.jdbc.DatabaseMetaData.getColumns(DatabaseMetaData.java:2074)
at org.datanucleus.store.rdbms.adapter.BaseDatastoreAdapter.getColumns(BaseDatastoreAdapter.java:1532)
at org.datanucleus.store.rdbms.schema.RDBMSSchemaHandler.refreshTableData(RDBMSSchemaHandler.java:921)
... 132 more
Nested Throwables StackTrace:
java.sql.SQLException: Column name pattern can not be NULL or empty.
at com.mysql.cj.jdbc.exceptions.SQLError.createSQLException(SQLError.java:545)
at com.mysql.cj.jdbc.exceptions.SQLError.createSQLException(SQLError.java:513)
at com.mysql.cj.jdbc.exceptions.SQLError.createSQLException(SQLError.java:505)
at com.mysql.cj.jdbc.exceptions.SQLError.createSQLException(SQLError.java:479)
at com.mysql.cj.jdbc.DatabaseMetaData.getColumns(DatabaseMetaData.java:2074)
at org.datanucleus.store.rdbms.adapter.BaseDatastoreAdapter.getColumns(BaseDatastoreAdapter.java:1532)
at org.datanucleus.store.rdbms.schema.RDBMSSchemaHandler.refreshTableData(RDBMSSchemaHandler.java:921)
at org.datanucleus.store.rdbms.schema.RDBMSSchemaHandler.getRDBMSTableInfoForTable(RDBMSSchemaHandler.java:821)
at org.datanucleus.store.rdbms.schema.RDBMSSchemaHandler.getRDBMSTableInfoForTable(RDBMSSchemaHandler.java:770)
at org.datanucleus.store.rdbms.schema.RDBMSSchemaHandler.getSchemaData(RDBMSSchemaHandler.java:206)
at org.datanucleus.store.rdbms.RDBMSStoreManager.getColumnInfoForTable(RDBMSStoreManager.java:2378)
at org.datanucleus.store.rdbms.table.TableImpl.validateColumns(TableImpl.java:215)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.performTablesValidation(RDBMSStoreManager.java:3393)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.addClassTablesAndValidate(RDBMSStoreManager.java:3190)
at org.datanucleus.store.rdbms.RDBMSStoreManager$ClassAdder.run(RDBMSStoreManager.java:2841)
at org.datanucleus.store.rdbms.AbstractSchemaTransaction.execute(AbstractSchemaTransaction.java:122)
at org.datanucleus.store.rdbms.RDBMSStoreManager.addClasses(RDBMSStoreManager.java:1605)
at org.datanucleus.store.AbstractStoreManager.addClass(AbstractStoreManager.java:954)
at org.datanucleus.store.rdbms.RDBMSStoreManager.getDatastoreClass(RDBMSStoreManager.java:679)
at org.datanucleus.store.rdbms.query.RDBMSQueryUtils.getStatementForCandidates(RDBMSQueryUtils.java:408)
at org.datanucleus.store.rdbms.query.JDOQLQuery.compileQueryFull(JDOQLQuery.java:947)
at org.datanucleus.store.rdbms.query.JDOQLQuery.compileInternal(JDOQLQuery.java:370)
at org.datanucleus.store.query.Query.executeQuery(Query.java:1744)
at org.datanucleus.store.query.Query.executeWithArray(Query.java:1672)
at org.datanucleus.store.query.Query.execute(Query.java:1654)
at org.datanucleus.api.jdo.JDOQuery.execute(JDOQuery.java:221)
at org.apache.hadoop.hive.metastore.MetaStoreDirectSql.ensureDbInit(MetaStoreDirectSql.java:184)
at org.apache.hadoop.hive.metastore.MetaStoreDirectSql.<init>(MetaStoreDirectSql.java:137)
at org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:295)
at org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:258)
at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:76)
at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:136)
at org.apache.hadoop.hive.metastore.RawStoreProxy.<init>(RawStoreProxy.java:57)
at org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:66)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:593)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:571)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:620)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at org.apache.spark.sql.hive.client.HiveClientImpl.<init>(HiveClientImpl.scala:188)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:264)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:358)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:262)
at org.apache.spark.sql.hive.HiveExternalCatalog.<init>(HiveExternalCatalog.scala:66)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.internal.SharedState$.org$apache$spark$sql$internal$SharedState$$reflect(SharedState.scala:166)
at org.apache.spark.sql.internal.SharedState.<init>(SharedState.scala:86)
at org.apache.spark.sql.SparkSession$$anonfun$sharedState$1.apply(SparkSession.scala:101)
at org.apache.spark.sql.SparkSession$$anonfun$sharedState$1.apply(SparkSession.scala:101)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession.sharedState$lzycompute(SparkSession.scala:101)
at org.apache.spark.sql.SparkSession.sharedState(SparkSession.scala:100)
at org.apache.spark.sql.internal.SessionState.<init>(SessionState.scala:157)
at org.apache.spark.sql.hive.HiveSessionState.<init>(HiveSessionState.scala:32)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.SparkSession$.org$apache$spark$sql$SparkSession$$reflect(SparkSession.scala:978)
at org.apache.spark.sql.SparkSession.sessionState$lzycompute(SparkSession.scala:110)
at org.apache.spark.sql.SparkSession.sessionState(SparkSession.scala:109)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$getOrCreate$5.apply(SparkSession.scala:878)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$getOrCreate$5.apply(SparkSession.scala:878)
at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:99)
at scala.collection.mutable.HashMap$$anonfun$foreach$1.apply(HashMap.scala:99)
at scala.collection.mutable.HashTable$class.foreachEntry(HashTable.scala:230)
at scala.collection.mutable.HashMap.foreachEntry(HashMap.scala:40)
at scala.collection.mutable.HashMap.foreach(HashMap.scala:99)
at org.apache.spark.sql.SparkSession$Builder.getOrCreate(SparkSession.scala:878)
at org.apache.spark.repl.Main$.createSparkSession(Main.scala:96)
at $line3.$read$$iw$$iw.<init>(<console>:15)
at $line3.$read$$iw.<init>(<console>:42)
at $line3.$read.<init>(<console>:44)
at $line3.$read$.<init>(<console>:48)
at $line3.$read$.<clinit>(<console>)
at $line3.$eval$.$print$lzycompute(<console>:7)
at $line3.$eval$.$print(<console>:6)
at $line3.$eval.$print(<console>)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at scala.tools.nsc.interpreter.IMain$ReadEvalPrint.call(IMain.scala:786)
at scala.tools.nsc.interpreter.IMain$Request.loadAndRun(IMain.scala:1047)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:638)
at scala.tools.nsc.interpreter.IMain$WrappedRequest$$anonfun$loadAndRunReq$1.apply(IMain.scala:637)
at scala.reflect.internal.util.ScalaClassLoader$class.asContext(ScalaClassLoader.scala:31)
at scala.reflect.internal.util.AbstractFileClassLoader.asContext(AbstractFileClassLoader.scala:19)
at scala.tools.nsc.interpreter.IMain$WrappedRequest.loadAndRunReq(IMain.scala:637)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:569)
at scala.tools.nsc.interpreter.IMain.interpret(IMain.scala:565)
at scala.tools.nsc.interpreter.ILoop.interpretStartingWith(ILoop.scala:807)
at scala.tools.nsc.interpreter.ILoop.command(ILoop.scala:681)
at scala.tools.nsc.interpreter.ILoop.processLine(ILoop.scala:395)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply$mcV$sp(SparkILoop.scala:38)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply(SparkILoop.scala:37)
at org.apache.spark.repl.SparkILoop$$anonfun$initializeSpark$1.apply(SparkILoop.scala:37)
at scala.tools.nsc.interpreter.IMain.beQuietDuring(IMain.scala:214)
at org.apache.spark.repl.SparkILoop.initializeSpark(SparkILoop.scala:37)
at org.apache.spark.repl.SparkILoop.loadFiles(SparkILoop.scala:105)
at scala.tools.nsc.interpreter.ILoop$$anonfun$process$1.apply$mcZ$sp(ILoop.scala:920)
at scala.tools.nsc.interpreter.ILoop$$anonfun$process$1.apply(ILoop.scala:909)
at scala.tools.nsc.interpreter.ILoop$$anonfun$process$1.apply(ILoop.scala:909)
at scala.reflect.internal.util.ScalaClassLoader$.savingContextLoader(ScalaClassLoader.scala:97)
at scala.tools.nsc.interpreter.ILoop.process(ILoop.scala:909)
at org.apache.spark.repl.Main$.doMain(Main.scala:69)
at org.apache.spark.repl.Main$.main(Main.scala:52)
at org.apache.spark.repl.Main.main(Main.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:743)
at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:187)
at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:212)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:126)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)

As seen in this answer : https://stackoverflow.com/a/45105368/1437346, I've tested to change the version of the mysql driver : from 6.0.6 to 5.1.34.
And it works now.

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