I coded in jupyter-notebook, fetching data from mysqlserver and then downloaded it as a python script because I want to implement it in my website using cronjob. So when I run the Python script, I'm getting this error:
import seaborn as sns
File "C:\Users\Debadri\AppData\Local\Programs\Python\Python36\lib\site-packages\seaborn\__init__.py", line 6, in <module>
from .rcmod import *
File "C:\Users\Debadri\AppData\Local\Programs\Python\Python36\lib\site-packages\seaborn\rcmod.py", line 5, in <module>
from . import palettes, _orig_rc_params
File "C:\Users\Debadri\AppData\Local\Programs\Python\Python36\lib\site-packages\seaborn\palettes.py", line 12, in <module>
from .utils import desaturate, set_hls_values, get_color_cycle
File "C:\Users\Debadri\AppData\Local\Programs\Python\Python36\lib\site-packages\seaborn\utils.py", line 7, in <module>
from scipy import stats
File "C:\Users\Debadri\AppData\Local\Programs\Python\Python36\lib\site-packages\scipy\__init__.py", line 61, in <module>
from numpy._distributor_init import NUMPY_MKL # requires numpy+mkl
ImportError: cannot import name 'NUMPY_MKL'
I tried to install numpy+mkl .whl file from this link: Numpy+MKL, this (numpy‑1.15.1+mkl‑cp37‑cp37m‑win_amd64.whl) package, but it showed, not supported when I tried to install it.
The following solution worked out:
Solution:
If you are using windows make sure you install numpy+mkl instead of just numpy.
If you have already installed scipy and numpy, uninstall then using "pip uninstall scipy" and "pip uninstall numpy"
Now download scipy from http://www.lfd.uci.edu/~gohlke/pythonlibs/#scipy (appropriate version for your python and system)
and install using "pip install scipy‑1.1.0‑cp36‑cp36m‑win_amd64.whl" (Please install from the list according to your system config)
Your numpy and Scipy both should work now.
These binaries by Christoph Gohlke makes it very easy to install python packages on windows. But make sure you download all the dependent packages from there.
Reference: 4th answer of this question ImportError: cannot import name NUMPY_MKL
Related
>>> import docx
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "c:\users\kevin\mu_code\docx\__init__.py", line 3, in <module>
from docx.api import Document # noqa
File "c:\users\kevin\mu_code\docx\api.py", line 14, in <module>
from docx.package import Package
File "c:\users\kevin\mu_code\docx\package.py", line 9, in <module>
from docx.opc.package import OpcPackage
File "c:\users\kevin\mu_code\docx\opc\package.py", line 9, in <module>
from docx.opc.part import PartFactory
File "c:\users\kevin\mu_code\docx\opc\part.py", line 12, in <module>
from .oxml import serialize_part_xml
File "c:\users\kevin\mu_code\docx\opc\oxml.py", line 12, in <module>
from lxml import etree
ImportError: cannot import name 'etree'
I have python-docx 0.8.10 and lxml 4.5.0, windows 10. I tried googling already but I'm not sure if I followed the suggestions correctly or if it's applicable in my case (lxml problems). I haven't had any problems installing other modules using "pip install" so I'm stuck and don't know how to proceed from here.
Check this,
Use pip install, to install the docx library and if you have already install it successfully then have a look into its dependencies. I think it is because of the incompatibility with its dependencies that is why you are getting the error.
pip install python-docx
Dependencies
Python 2.6, 2.7, 3.3, or 3.4
lxml >= 2.3.2
I don't know whether this may be an appropriate solution for you. But this is what I generally follow. Just install Anaconda in your system and an environment according to your needs. For your case create an environment for Python 3.4 using the following command
conda create --name py34 python=3.4
You then install libraries according to your needs in the respective environment. Now you can work into each environment without interfering with the libraries of the other environment. To use anaconda kindly follow Anaconda cheatsheet.
Kindly refer to the link. Hope this helps you.
This is almost certainly a problem with the lxml install. python-docx works with all versions of Python >= 2.6.
Instead of import docx, try from lxml import etree. If this produces the same error message, you know you've narrowed it down.
lxml depends on a couple of C libraries, lib2xml and libxslt if I remember correctly. These are sometimes tricky to install. In any case, you'll find solutions to those problems by searching on "lxml install windows" or similar.
Once from lxml import etree works without error I think you'll find import docx does too.
I have a problem importing scipy.optimize, as well as other scipy's modules. Every time I run the code I get the following error:
File "C:/Users/project/test.py", line 4, in
from scipy.optimize import *
File "C:\Users\project\venv\lib\site-packages\scipy__init__.py", line 156, in
from . import fft
File "C:\Users\project\venv\lib\site-packages\scipy\fft__init__.py", line 76, in
from ._basic import (
File "C:\Users\project\venv\lib\site-packages\scipy\fft_basic.py", line 1, in
from scipy._lib.uarray import generate_multimethod, Dispatchable
File "C:\Users\project\venv\lib\site-packages\scipy_lib\uarray.py", line 27, in
from ._uarray import *
File "C:\Users\project\venv\lib\site-packages\scipy_lib_uarray__init__.py", line 114, in
from ._backend import *
File "C:\Users\project\venv\lib\site-packages\scipy_lib_uarray_backend.py", line 15, in
from . import _uarray # type: ignore
ImportError: DLL load failed: The specified module could not be found.
I tried reinstalling both numpy and scipy as well as installing scipy manually from here as some suggested, however nothing changed. I use Windows10 64b, Python 3.7.
I uninstalled SciPy 1.4.1 and installed SciPy 1.4.0. It resolved the problem.
pip uninstall scipy
pip install scipy==1.4.0
I am getting below error when execute below:
import numpy as np
The full stack trace:
File "C:\Anaconda3\lib\site-packages\numpy\__init__.py", line 142, in <module>
from . import add_newdocs
File "C:\Anaconda3\lib\site-packages\numpy\add_newdocs.py", line 13, in <module>
from numpy.lib import add_newdoc
File "C:\Anaconda3\lib\site-packages\numpy\lib\__init__.py", line 8, in <module>
from .type_check import *
File "C:\Anaconda3\lib\site-packages\numpy\lib\type_check.py", line 11, in <module>
import numpy.core.numeric as _nx
File "C:\Anaconda3\lib\site-packages\numpy\core\__init__.py", line 14, in <module>
from . import multiarray
ImportError: DLL load failed: The specified module could not be found.
Process finished with exit code 1
This looks like some of the dependencies are missing for the package numpy. The DLL load failed error points towards either incorrectly installed and/or missing files for package numpy. You should just try installing numpy again through Anaconda CLI using the following command:
conda install numpy
This works most of the times, if your python environments are sorted correctly. Do make sure that the python installation you're using for Anaconda, is the same one as your coding environment. Conflicting versions can sometimes lead to corrupted packages.
You could also try the following command to update the Anaconda Environment just to make sure that the installations are up to date, and not conflicting with older versions..
conda update -y -all
I'm trying to call a function from the cluster module, like so:
import sklearn
db = sklearn.cluster.DBSCAN()
and I get the following error:
AttributeError: 'module' object has no attribute 'cluster'
Tab-completing in IPython, I seem to have access to the base, clone, externals, re, setup_module, sys, and warning modules. Nothing else, though others (including cluster) are in the sklearn directory.
Following pbu's advice below and using
from sklearn import cluster
I get:
Traceback (most recent call last):
File "test.py", line 2, in <module>
from sklearn import cluster
File "C:\Python34\lib\site-packages\sklearn\cluster\__init__.py", line 6, in <module>
from .spectral import spectral_clustering, SpectralClustering
File "C:\Python34\lib\site-packages\sklearn\cluster\spectral.py", line 13, in <module>
from ..utils import check_random_state, as_float_array
File "C:\Python34\lib\site-packages\sklearn\utils\__init__.py", line 16, in <module>
from .class_weight import compute_class_weight, compute_sample_weight
File "C:\Python34\lib\site-packages\sklearn\utils\class_weight.py", line 7, in <module>
from ..utils.fixes import in1d
File "C:\Python34\lib\site-packages\sklearn\utils\fixes.py", line 318, in <module>
from scipy.sparse.linalg import lsqr as sparse_lsqr
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\__init__.py", line 109, in <module>
from .isolve import *
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\isolve\__init__.py", line 6, in <module>
from .iterative import *
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\isolve\iterative.py", line 7, in <module>
from . import _iterative
ImportError: DLL load failed: The specified module could not be found.
I'm using Python 3.4 on Windows, scikit-learn 0.16.1.
You probably don't use Numpy+MKL, but only Numpy.
I had the same problem and reinstalling Numpy with MKL
pip install --upgrade --force-reinstall "numpy‑1.16.3+mkl‑cp37‑cp37m‑win32.whl"
fixed it.
Note: update the file to the latest version, possibly 64bit - see the list of available Windows binaries
Problem was with scipy/numpy install. I'd been using the (normally excellent!) unofficial installers from http://www.lfd.uci.edu/~gohlke/pythonlibs/. Uninstall/re-install from there made no difference, but installing with the official installers (linked from http://www.scipy.org/install.html) did the trick.
I am using anaconda got the same error as the OP, when loading Orange, or PlotNine.
I can't recall when this start to happen.
Tracing the dependency of Anaconda3\Lib\site-packages\scipy\special\_ufuncs.cp36-win32.pyd, libifcoremd.dll and libmmd.dll are missing in DependencyWalk. Searching them in anaconda root directry, they are located in both ICC_RT and one version of MKL package.
Adding Anaconda3\pkgs\mkl-2017.0.3-0\Library\bin to PATH, seems to fix SciPy and NumPy related DLL load failure, the above package starts to work again.
I still don't know how to fix this properly. Apparently the downside is that the MKL package could be updated and versions may change so does the path. In this aspect Its equally inconvenient as adding a non-managed package.
Reinstalling ICC_RT fixed the issue for me, libmmd.dll and the related dlls are automatically copied into anaconda3/library/bin afterwards, which is automatically added into PATH by activate command. All previous numpy/scipy related cant load DLL errors are gone now.
From the error log, it shows that scipy module is the most recent module fails to import
File "C:\Python34\lib\site-packages\sklearn\utils\fixes.py", line 318, in <module>
from scipy.sparse.linalg import lsqr as sparse_lsqr
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\__init__.py", line 109, in <module>
from .isolve import *
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\isolve\__init__.py", line 6, in <module>
from .iterative import *
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\isolve\iterative.py", line 7, in <module>
from . import _iterative
ImportError: DLL load failed: The specified module could not be found.
I have the same error that show the same log, the problem'd gone when I uninstall/install scipy:
pip uninstall scipy
pip install scipy
Place this line on top of the python file
from sklearn import cluster
That should do it :))
For me what fixed it were these commands:
pip uninstall sklearn
pip uninstall scikit-learn
pip uninstall scipy
pip install scipy
pip install scikit-learnhere
I had the same issue and solved it by installing/updating the mkl package:
conda install mkl
or
pip install mkl
Just for full information, this also downgraded the following packages:
The following packages will be UPDATED:
mkl: 2017.0.4-h6d528fc_0 defaults --> 2018.0.3-1 defaults
The following packages will be DOWNGRADED:
numpy: 1.11.3-py34_0 defaults --> 1.10.1-py34_0 defaults
pandas: 0.19.2-np111py34_1 defaults --> 0.18.1-np110py34_0 defaults
scikit-learn: 0.18.1-np111py34_1 defaults --> 0.17-np110py34_1 defaults
scipy: 0.19.1-np111py34_0 defaults --> 0.16.0-np110py34_0 defaults
I struggled trying to figure this one out; tried to download and install the (unofficial) Numpy+MKL library from the website (risky/tedious?).
Ultimately found success by:
Login to command prompt using admin rights; how to here: https://superuser.com/questions/968214/open-cmd-as-admin-with-windowsr-shortcut
Uninstall existing/tangled version of Scipy & Numpy
pip uninstall scipy
pip uninstall numpy
Fresh install Scipy & Numpy
pip install scipy
pip install numpy
Run Jupyter notebook; it worked for me.
The message ImportError: DLL load failed: The specified module could not be found
informs that there is failure to identify and source the required DLL(s) to use the scikit-learn library; a fresh install of scipy/numpy probably enables a better routing of DLL connections called from Jupyter notebook code(s).
download microsoft visual c++ distribution
link : https://www.microsoft.com/en-in/download/details.aspx?id=53840
vc_redist.x64.exe
install and run this .exe file in your computer.. the DLL import module error will not appear after this
now it will work fine enjoy :)
I'm trying to install geopandas.
Whether I do one of these :
conda install -c conda-forge geopandas
# or
conda install -c conda-forge fiona
# or
pip3 install Fiona‑1.7.9‑cp36‑cp36m‑win_amd64.whl # downloaded from http://www.lfd.uci.edu/~gohlke/pythonlibs/#fiona
When I try either import geopandas or import fiona, I get the following error :
File "<ipython-input-229-c9ee6bd24dbc>", line 1, in <module>
import geopandas
File "C:\ProgramData\Anaconda3\lib\site-packages\geopandas\__init__.py", line 4, in <module>
from geopandas.io.file import read_file
File "C:\ProgramData\Anaconda3\lib\site-packages\geopandas\io\file.py", line 3, in <module>
import fiona
File "C:\ProgramData\Anaconda3\lib\site-packages\fiona\__init__.py", line 69, in <module>
from fiona.collection import Collection, BytesCollection, vsi_path
File "C:\ProgramData\Anaconda3\lib\site-packages\fiona\collection.py", line 11, in <module>
from fiona.ogrext import (
ImportError: cannot import name 'calc_gdal_version_num'
Any idea on how to solve this ?
(I'm on windows 7 64 bit by the way, in case it's relevant)
EDIT :
It seems this behavior happens only in the IPython console of Spyder (v3.1.4). It doesn't happen when using the python3 command line in the terminal, or the python console of Spyder. I would still love a fix for the IPython console of Spyder, the python console in Spyder is reaaaally slow.