How can I ensure that an entire DAG of spark is highly available i.e. not recomputed from scratch when the driver is restarted (default HA in yarn cluster mode).
Currently, I use spark to orchestrate multiple smaller jobs i.e.
read table1
hash some columns
write to HDFS
this is performed for multiple tables.
Now when the driver is restarted i.e. when working on the second table the first one is reprocessed - though it already would have been stored successfully.
I believe that the default mechanism of checkpointing (the raw input values) would not make sense.
What would be a good solution here?
Is it possible to checkpoint the (small) configuration information and only reprocess what has not already been computed?
TL;DR Spark is not a task orchestration tool. While it has built-in scheduler and some fault tolerance mechanisms built-in, it as suitable for granular task management, as for example server orchestration (hey, we can call pipe on each machine to execute bash scripts, right).
If you want granular recovery choose a minimal unit of computation that makes sense for a given process (read, hash, write looks like a good choice, based on the description), make it an application and use external orchestration to submit the jobs.
You can build poor man's alternative, by checking if expected output exist and skipping part of the job in that case, but really don't - we have variety of battle tested tools which can do way better job than this.
As a side note Spark doesn't provide HA for the driver, only supervision with automatic restarts. Also independent jobs (read -> transform -> write) create independent DAGs - there is no global DAG and proper checkpoint of the application would require full snapshot of its state (like good old BLCR).
when the driver is restarted (default HA in yarn cluster mode).
When the driver of a Spark application is gone, your Spark application is gone and so are all the cached datasets. That's by default.
You have to use some sort of caching solution like https://www.alluxio.org/ or https://ignite.apache.org/. Both work with Spark and both claim to be offering the feature to outlive a Spark application.
There has been times when people used Spark Job Server to share data across Spark applications (which is similar to restarting Spark drivers).
Related
When writing an Application in Scala using Spark, when ran, is it a regular Scala application which "delegates the spark jobs to the spark cluster" and gets the desired results back ?
Or does it get completely compiled to something special consumed by a "spark engine" ?
It depends on the "deploy mode"
If you use local mode, then all actions occur locally, and you don't get any benefits from distribution that Spark is meant for. While it can be used to abstract different libraries and provide clean ways to process data via dataframes or ML, it's not really intended to be used like that
Instead, you can use cluster mode, in which your app just defines the steps to take, and then when submitted, everything happens in the remote cluster. In order to process data back in the driver, you need to use methods such as collect(), or otherwise download the results from remote file systems/databases
We're using Spark to run an ETL process by which data gets loaded in from a massive (500+GB) MySQL database and converted into aggregated JSON files, then gets written out to Amazon S3.
My question is two-fold:
This job could take a long time to run, and it would be nice to know how that mapping is going. I know Spark has a built in log manager. Is it as simple as just putting a log statement inside of each map? I'd like to know when each record gets mapped.
Suppose this massive job fails in the middle (maybe it chokes on a DB record or the MYSQL connection drops). Is there an easy way to recover from this in Spark? I've heard that caching/checkpointing can potentially solve this, but I'm not sure how?
Thanks!
Seems like 2 questions with lost of answers and detail. Anyway, assuming non-SPARK Streaming answer and referencing other based on my own reading / research, a limited response:
The following on logging progress checking of stages, tasks, jobs:
Global Logging via log4j and tailoring of this by using under the template stored under SPARK_HOME/conf folder, the template log4j.properties.template file which serves as a basis for defining logging requirements for ones own purposes but at SPARK level.
Programmtically by using Logger, using import org.apache.log4j.{Level, Logger}.
REST API to get status of SPARK Jobs. See this enlightening blog: http://arturmkrtchyan.com/apache-spark-hidden-rest-api
There is also a Spark Listener that can be used
:http://:8080 to see progress via Web UI.
Depends on type of failure. Graceful vs. non-graceful, fault tolerance aspects or memory usage issues and things like serious database duplicate key errors depending on API used.
See How does Apache Spark handles system failure when deployed in YARN? SPARK handles its own failures by looking at DAG and attempting to reconstruct a partition by re-execution of what is needed. This all encompasses aspects under fault tolerance for which nothing needs to be done.
Things outside of SPARK's domain and control mean it's over. E.g. memory issues that may result from exceeding various parameters on at large scale computations, DF JDBC write against a store with a duplicate error, JDBC connection outages. This means re-execution.
As an aside, some aspects are not logged as failures even though they are, e.g. duplicate key inserts on some Hadoop Storage Managers.
I have a p2p mesh network of nodes. It has its own balancing and given a task T can reliably execute it (if one node fails another will continue). My mesh network has Java and Python apis. I wonder what are the steps needed to make Spark call my API to lunch tasks?
Oh boy, that's a really broad question, but I agree with Daniel. If you really want to do this, you could first start with:
Scheduler Backends, which states things like:
Being a scheduler backend in Spark assumes a Apache Mesos-like model in which "an application" gets resource offers as machines
become available and can launch tasks on them. Once a scheduler
backend obtains the resource allocation, it can start executors.
TaskScheduler, since you need to understand how tasks are meant
to be scheduled to build a scheduler, which mentions things like
this:
A TaskScheduler gets sets of tasks (as TaskSets) submitted to it from the DAGScheduler for each stage, and is responsible for sending
the tasks to the cluster, running them, retrying if there are
failures, and mitigating stragglers.
An important concept here is the Dependency Acyclic Graph (GDA),
where you can take a look at its GitHub page.
You can also read
What is the difference between FAILED AND ERROR in spark application states to get an intuition.
Spark Listeners — Intercepting Events from Spark can also come
in handy:
Spark Listeners intercept events from the Spark scheduler that are emitted over the course of execution of Spark applications.
You could take first the Exercise: Developing Custom SparkListener
to monitor DAGScheduler in Scala to check your understanding.
In general, Mastering Apache Spark 2.0 seems to have plenty of resources, but I will not list more here.
Then, you have to meet the Final Boss in this game, Spark's Scheduler GitHub page and get the feel. Hopefully, all this will be enough to get you started! :)
Take a look at how existing schedulers (YARN and Mesos) are implemented.
Implement the scheduler for your system.
Contribute your changes to the Apache Spark project.
I have a use case where in I launch local spark (embedded) inside an application server rather than going for spark rest job server or kernel. Because former(embedded spark) has very low latency compared to other. I am interested in
Drawbacks of this approach if there are any.
Can same be used in production?
P.S. Low latency is priority here.
EDIT: Size of the data being processed for most of the cases will be less than 100mb.
I don't think it is a drawback at all. If you have a look at the implementation of the Hive Thriftserver within the Spark project itself, they also manage SQLContext etc, in the Hive Server process. This is especially the case, if the amount of data is small and the driver can handle it easily. So I would also see this as a hint, that this okay for production use.
But I totally agree, the documentation or advice in general how to integrate spark into interactive customer-facing application is lacking behind the information for BigData pipelines.
I have a couple of use cases for Apache Spark applications/scripts, generally of the following form:
General ETL use case -
more specifically a transformation of a Cassandra column family containing many events (think event sourcing) into various aggregated column families.
Streaming use case -
realtime analysis of the events as they arrive in the system.
For (1), I'll need to kick off the Spark application periodically.
For (2), just kick off the long running Spark Streaming process at boot time and let it go.
(Note - I'm using Spark Standalone as the cluster manager, so no yarn or mesos)
I'm trying to figure out the most common / best practice deployment strategies for Spark applications.
So far the options I can see are:
Deploying my program as a jar, and running the various tasks with spark-submit - which seems to be the way recommended in the spark docs. Some thoughts about this strategy:
how do you start/stop tasks - just using simple bash scripts?
how is scheduling managed? - simply use cron?
any resilience? (e.g. Who schedules the jobs to run if the driver server dies?)
Creating a separate webapp as the driver program.
creates a spark context programmatically to talk to the spark cluster
allowing users to kick off tasks through the http interface
using Quartz (for example) to manage scheduling
could use cluster with zookeeper election for resilience
Spark job server (https://github.com/ooyala/spark-jobserver)
I don't think there's much benefit over (2) for me, as I don't (yet) have many teams and projects talking to Spark, and would still need some app to talk to job server anyway
no scheduling built in as far as I can see
I'd like to understand the general consensus w.r.t a simple but robust deployment strategy - I haven't been able to determine one by trawling the web, as of yet.
Thanks very much!
Even though you are not using Mesos for Spark, you could have a look at
-Chronos offering a distributed and fault tolerant cron
-Marathon a Mesos framework for long running applications
Note that this doesn't mean you have to move your spark deployment to mesos, e.g. you could just use chronos to trigger the spark -submit.
I hope I understood your problem correctly and this helps you a bit!