pyspark SparkContext issue "Another SparkContext is being constructed" - apache-spark

I installed Spark on my EC2 instance following this tutorial:
https://sparkour.urizone.net/recipes/installing-ec2/#03
but when I try to start pyspark shell, I get this error:
"Another SparkContext is being constructed"
Here is the full exception:
[ec2-user#ip-10-0-0-153 ~]$ pyspark
Python 2.7.12 (default, Sep 1 2016, 22:14:00)
[GCC 4.8.3 20140911 (Red Hat 4.8.3-9)] on linux2
Type "help", "copyright", "credits" or "license" for more information.
Setting default log level to "WARN".
To adjust logging level use sc.setLogLevel(newLevel). For SparkR, use setLogLevel(newLevel).
17/08/22 11:46:16 WARN spark.SparkContext: Another SparkContext is being constructed (or threw an exception in its constructor). This may indicate an error, since only one SparkContext may be running in this JVM (see SPARK-2243). The other SparkContext was created at:
org.apache.spark.api.java.JavaSparkContext.<init>(JavaSparkContext.scala:58)
sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
java.lang.reflect.Constructor.newInstance(Constructor.java:423)
py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:247)
py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
py4j.Gateway.invoke(Gateway.java:236)
py4j.commands.ConstructorCommand.invokeConstructor(ConstructorCommand.java:80)
py4j.commands.ConstructorCommand.execute(ConstructorCommand.java:69)
py4j.GatewayConnection.run(GatewayConnection.java:214)
java.lang.Thread.run(Thread.java:748)
Traceback (most recent call last):
File "/opt/spark/python/pyspark/shell.py", line 54, in <module>
spark = SparkSession.builder.getOrCreate()
File "/opt/spark/python/pyspark/sql/session.py", line 169, in getOrCreate
sc = SparkContext.getOrCreate(sparkConf)
File "/opt/spark/python/pyspark/context.py", line 334, in getOrCreate
SparkContext(conf=conf or SparkConf())
File "/opt/spark/python/pyspark/context.py", line 118, in __init__
conf, jsc, profiler_cls)
File "/opt/spark/python/pyspark/context.py", line 180, in _do_init
self._jsc = jsc or self._initialize_context(self._conf._jconf)
File "/opt/spark/python/pyspark/context.py", line 273, in _initialize_context
return self._jvm.JavaSparkContext(jconf)
File "/opt/spark/python/lib/py4j-0.10.4-src.zip/py4j/java_gateway.py", line 1401, in __call__
File "/opt/spark/python/lib/py4j-0.10.4-src.zip/py4j/protocol.py", line 319, in get_return_value
py4j.protocol.Py4JJavaError: An error occurred while calling None.org.apache.spark.api.java.JavaSparkContext.
: java.lang.NoClassDefFoundError: Could not initialize class org.apache.spark.internal.config.package$
at org.apache.spark.SparkConf.validateSettings(SparkConf.scala:546)
at org.apache.spark.SparkContext.<init>(SparkContext.scala:373)
at org.apache.spark.api.java.JavaSparkContext.<init>(JavaSparkContext.scala:58)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:247)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:236)
at py4j.commands.ConstructorCommand.invokeConstructor(ConstructorCommand.java:80)
at py4j.commands.ConstructorCommand.execute(ConstructorCommand.java:69)
at py4j.GatewayConnection.run(GatewayConnection.java:214)
at java.lang.Thread.run(Thread.java:748)
I googled a lot and tried everything with no solution. I used this code to get a list of all running Contexts:
>>> from pyspark import SparkConf
>>> conf = SparkConf()
>>> conf.getAll()
And I got this:
[(u'spark.master', u'local[*]'), (u'spark.submit.deployMode', u'client'), (u'spark.app.name', u'PySparkShell')]
Any ideas how can I solve this issue?

I encountered the same error while trying to run PySpark in Jupyter Notebook (on macOS). The problem seems related to a Java version incompatibility and it only works with Java 8. I fixed the issue by changing the java version:
check java (JVM) installation versions. If you don't have java 8 installed, install it following instructions for your OS.
/usr/libexec/java_home -V
change the version to Java 8 (it is enough to do it for the current session)
export JAVA_HOME=/usr/libexec/java_home -v 1.8....
check:
java -version
run PySpark. that should solve the issue.

I solved the problem by setting the SPARK_MASTER_HOST=127.0.0.1 in spark-env.sh file

Navigate to Spark config folder:
cd $SPARK_HOME/conf
Open spark-env.sh file using an editor (is this file does not exist copy the spark-env-template file):
vi spark-env.sh
edit the SPARK_LOCAL_IP value to your machine IP (e.g. 205.210.42.205) :
SPARK_LOCAL_IP="205.210.42.205"
Hope this helps.

Related

How to resolve spark error when reading from s3

I am getting an error(java.io.IOException: No FileSystem for scheme: S3a) when running a spark application. I have looked through various other questions regarding this type of error, but Im not able to determine the solution. Spark is version 3.1.2
Updated details below to reflect current state
pyspark script:
import os
#os.environ['PYSPARK_SUBMIT_ARGS'] = '--packages com.amazonaws:aws-java-sdk:1.7.4,org.apache.hadoop:hadoop-aws:2.7.4 pyspark-shell'
from pyspark.sql import SparkSession
spark = SparkSession.builder \
.appName("s3reader") \
.getOrCreate()\
sc = spark.sparkContext
#sc._jsc.hadoopConfiguration().set("fs.s3a.impl", "org.apache.hadoop.fs.s3a.S3AFileSystem")
#sc._jsc.hadoopConfiguration().set("fs.s3a.access.key", "xxxxxxx")
#sc._jsc.hadoopConfiguration().set("fs.s3a.secret.key", "xxxxxxxxxxxx")
#sc._jsc.hadoopConfiguration().set("fs.s3a.endpoint","xxx.x.xxx.x.com", "us-1-east")
#sc._jsc.hadoopConfiguration().set("fs.s3a.path.style.access", "true")
df = spark.read.json("S3a://silver/testfolder/4a2426b2-856c-4e9b-b698-b3dcdca74f48")
print(df)
here are my jar versions:
cloud#spark-dev-master:/usr/local/spark/jars$ ls -ltr *aws*
-rw-rw-r-- 1 cloud cloud 126287 Aug 18 2016 hadoop-aws-2.7.4.jar
-rw-rw-r-- 1 cloud cloud 4479 Sep 17 02:36 aws-java-sdk-1.7.4.jar
stack trace:
Traceback (most recent call last):
File "/home/cloud/sparks3test.py", line 18, in <module>
df = spark.read.json("S3a://silver/testfolder/4a2426b2-856c-4e9b-b698-b3dcdca74f48")
File "/usr/local/spark/python/lib/pyspark.zip/pyspark/sql/readwriter.py", line 372, in json
File "/usr/local/spark/python/lib/py4j-0.10.9-src.zip/py4j/java_gateway.py", line 1304, in __call__
File "/usr/local/spark/python/lib/pyspark.zip/pyspark/sql/utils.py", line 111, in deco
File "/usr/local/spark/python/lib/py4j-0.10.9-src.zip/py4j/protocol.py", line 326, in get_return_value
py4j.protocol.Py4JJavaError: An error occurred while calling o33.json.
: java.io.IOException: No FileSystem for scheme: S3a
at org.apache.hadoop.fs.FileSystem.getFileSystemClass(FileSystem.java:2660)
at org.apache.hadoop.fs.FileSystem.createFileSystem(FileSystem.java:2667)
at org.apache.hadoop.fs.FileSystem.access$200(FileSystem.java:94)
at org.apache.hadoop.fs.FileSystem$Cache.getInternal(FileSystem.java:2703)
at org.apache.hadoop.fs.FileSystem$Cache.get(FileSystem.java:2685)
at org.apache.hadoop.fs.FileSystem.get(FileSystem.java:373)
at org.apache.hadoop.fs.Path.getFileSystem(Path.java:295)
at org.apache.spark.sql.execution.streaming.FileStreamSink$.hasMetadata(FileStreamSink.scala:46)
at org.apache.spark.sql.execution.datasources.DataSource.resolveRelation(DataSource.scala:377)
at org.apache.spark.sql.DataFrameReader.loadV1Source(DataFrameReader.scala:325)
at org.apache.spark.sql.DataFrameReader.$anonfun$load$3(DataFrameReader.scala:307)
at scala.Option.getOrElse(Option.scala:189)
at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:307)
at org.apache.spark.sql.DataFrameReader.json(DataFrameReader.scala:519)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at java.base/jdk.internal.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:282)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:238)
at java.base/java.lang.Thread.run(Thread.java:829)
You need to use hadoop-aws version 3.2.0.
You can refer my previous answer here.
I am getting an error(java.lang.NoClassDefFoundError:org/apache/hadoop/fs/StreamCapabilities)
This is what you see when you mix hadoop-aws and hadoop-common JAR versions. They must match point for point (as spark JARs also require).
Do not attempt to work around this except by syncing up JARs, you will only be moving stack traces around.
See Hadoop troubleshooting s3a
As there still appeared to be jar dependecies issues, I did a fresh install on spark using 3.1.2 and hadoop 3.2.0 and aligned hadoop-aws and java-sdk jars with aws-common jar version on the master and worker nodes. This corrected the file system issue. Consequently, upgrading to 3.2.0 also corrected the endpoint issue we were running to as well as path.style.access=true is not supported in any hadoop version older than 2.8.0. That issue was documented here: https://issues.apache.org/jira/browse/HADOOP-12963 for reference.

ClassNotFoundException loading data from snowflake with pyspark

I am getting this error when I try to load data from snowflake into a dataframe with pyspark:
py4j.protocol.Py4JJavaError: An error occurred while calling o45.load.
: java.lang.NoClassDefFoundError: net/snowflake/client/jdbc/internal/org/bouncycastle/jce/provider/BouncyCastleProvider
Here is some code to reproduce the error:
from pyspark.sql import SparkSession
from pyspark import SparkConf
conf = SparkConf()
conf.set('spark.jars.packages',
'net.snowflake:spark-snowflake_2.11:2.8.4-spark_2.4,net.snowflake:snowflake-jdbc:3.12.17')
spark = SparkSession.builder.config(conf=conf).getOrCreate()
sf_reader_options = {'sfURL': 'example.snowflakecomputing.com', 'sfAccount': 'example_account',
'sfWarehouse': 'example_warehouse', 'sfRole': 'DATASCIENCE', 'sfUser': 'user',
'sfPassword': 'pass', 'sfDatabase': 'db_name', 'sfSchema': 'schema_name', 'sfTimezone': 'UTC'}
reader = (spark
.read
.format('net.snowflake.spark.snowflake')
.options(**sf_reader_options))
result = reader.option('query', 'select * from TABLE_NAME').load()
The stacktrace for the error looks like this:
Traceback (most recent call last):
File "<input>", line 1, in <module>
File "/Users/charlie/lark/bigbird/venv/lib/python3.7/site-packages/pyspark/sql/readwriter.py", line 172, in load
return self._df(self._jreader.load())
File "/Users/charlie/lark/bigbird/venv/lib/python3.7/site-packages/py4j/java_gateway.py", line 1257, in __call__
answer, self.gateway_client, self.target_id, self.name)
File "/Users/charlie/lark/bigbird/venv/lib/python3.7/site-packages/pyspark/sql/utils.py", line 63, in deco
return f(*a, **kw)
File "/Users/charlie/lark/bigbird/venv/lib/python3.7/site-packages/py4j/protocol.py", line 328, in get_return_value
format(target_id, ".", name), value)
py4j.protocol.Py4JJavaError: An error occurred while calling o45.load.
: java.lang.NoClassDefFoundError: net/snowflake/client/jdbc/internal/org/bouncycastle/jce/provider/BouncyCastleProvider
at net.snowflake.spark.snowflake.Parameters$.mergeParameters(Parameters.scala:202)
at net.snowflake.spark.snowflake.DefaultSource.createRelation(DefaultSource.scala:59)
at org.apache.spark.sql.execution.datasources.DataSource.resolveRelation(DataSource.scala:332)
at org.apache.spark.sql.DataFrameReader.loadV1Source(DataFrameReader.scala:242)
at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:230)
at org.apache.spark.sql.DataFrameReader.load(DataFrameReader.scala:186)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:282)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:238)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.ClassNotFoundException: net.snowflake.client.jdbc.internal.org.bouncycastle.jce.provider.BouncyCastleProvider
at java.net.URLClassLoader.findClass(URLClassLoader.java:382)
at java.lang.ClassLoader.loadClass(ClassLoader.java:418)
at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:352)
at java.lang.ClassLoader.loadClass(ClassLoader.java:351)
... 17 more
I am using spark 2.4.7 and spark-snowflake 2.8.4, with snowflake jdbc 3.12.17. I am on Mac OS X Big Sur. This happened after I upgraded to Big Sur, though I'm not sure whether that's related.
I have tried:
adding bouncy castle provider to my configuration as a package dependency
checking that JAVA_HOME points to Java 8 (it does)
reinstalling java 8 (with homebrew and adoptopenjdk)
adding bouncy castle as a security provider, per instructions here
updating spark-snowflake and snowflake-jdbc (was using 2.7.0 and 3.12.3 before, same error)
Any help would be much appreciated!
Ultimately, I was able to resolve this by:
downloading Java straight from Oracle (rather than uninstalling and reinstalling with homebrew),
deleting spark, downloading again (from apache, not via homebrew), and setting up environment variables as described here (mostly... I use a virtual environment so I didn't hardcode PYSPARK_PYTHON to system python3)
uninstalling pyspark and reinstalling
quitting pycharm and reopening (this refreshed all my environment variables that were set in .zshrc, like JAVA_HOME)
There's almost certainly an easier way, but this worked.

java.util.NoSuchElementException: key not found: _PYSPARK_DRIVER_CALLBACK_HOST

i'm using PyCharm 2019.1, and Python 3.7 (in Project Interpreter)
On PyCharm, i've added Pyspark 2.4.2
when i run the following code (to create a Spark DataFrame), i get error
java.util.NoSuchElementException: key not found: _PYSPARK_DRIVER_CALLBACK_HOST
....
Exception: Java gateway process exited before sending its port number
from the other SO issues, it seems that it is related to version mismatch,
question is how to resolve this
my $SPARK_HOME points to Apache Spark 2.2.0,
when i try to install 2.2.0 on Pycharm, it gives error
Collecting pyspark==2.2.0
Could not find a version that satisfies the requirement pyspark==2.2.0 (from versions: 2.1.2, 2.1.3, 2.2.0.post0, 2.2.1, 2.2.2, 2.2.3, 2.3.0, 2.3.1, 2.3.2, 2.3.3, 2.4.0, 2.4.1, 2.4.2, 2.4.3)
No matching distribution found for pyspark==2.2.0
Any ideas on how to fix this ?
CODE ->
from pyspark.sql import SparkSession
d = {'a':1, 'b':2, 'c':3}
spark = SparkSession.builder.master("local").appName("CreatingDF").getOrCreate()
pandaDF = spark.createDataFrame(d)
print(pandaDF)
ERROR ->
Using Spark's default log4j profile: org/apache/spark/log4j-defaults.properties
Setting default log level to "WARN".
To adjust logging level use sc.setLogLevel(newLevel). For SparkR, use setLogLevel(newLevel).
19/05/06 23:21:45 ERROR SparkUncaughtExceptionHandler: Uncaught exception in thread Thread[main,5,main]
java.util.NoSuchElementException: key not found: _PYSPARK_DRIVER_CALLBACK_HOST
at scala.collection.MapLike$class.default(MapLike.scala:228)
at scala.collection.AbstractMap.default(Map.scala:59)
at scala.collection.MapLike$class.apply(MapLike.scala:141)
at scala.collection.AbstractMap.apply(Map.scala:59)
at org.apache.spark.api.python.PythonGatewayServer$$anonfun$main$1.apply$mcV$sp(PythonGatewayServer.scala:50)
at org.apache.spark.util.Utils$.tryOrExit(Utils.scala:1262)
at org.apache.spark.api.python.PythonGatewayServer$.main(PythonGatewayServer.scala:37)
at org.apache.spark.api.python.PythonGatewayServer.main(PythonGatewayServer.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:755)
at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:180)
at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:205)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:119)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Traceback (most recent call last):
File "/Users/karanalang/PycharmProjects/PythonFalcon/FalconIncremental/python_createDF2.py", line 28, in <module>
spark = SparkSession.builder.master("local").appName("CreatingDF").getOrCreate()
File "/Users/karanalang/anaconda3/lib/python3.7/site-packages/pyspark/sql/session.py", line 173, in getOrCreate
sc = SparkContext.getOrCreate(sparkConf)
File "/Users/karanalang/anaconda3/lib/python3.7/site-packages/pyspark/context.py", line 367, in getOrCreate
SparkContext(conf=conf or SparkConf())
File "/Users/karanalang/anaconda3/lib/python3.7/site-packages/pyspark/context.py", line 133, in __init__
SparkContext._ensure_initialized(self, gateway=gateway, conf=conf)
File "/Users/karanalang/anaconda3/lib/python3.7/site-packages/pyspark/context.py", line 316, in _ensure_initialized
SparkContext._gateway = gateway or launch_gateway(conf)
File "/Users/karanalang/anaconda3/lib/python3.7/site-packages/pyspark/java_gateway.py", line 46, in launch_gateway
return _launch_gateway(conf)
File "/Users/karanalang/anaconda3/lib/python3.7/site-packages/pyspark/java_gateway.py", line 108, in _launch_gateway
raise Exception("Java gateway process exited before sending its port number")
Exception: Java gateway process exited before sending its port number
Yes.It's versioning issue. Verify your python version on your command prompt/terminal. If default python version is 2.7 and pyCharm is pointing to python3.7 in it's interpreter then it should work.
mostly Anaconda3 and onwards cause this issue.

Adding S3DistCp to PySpark

I'm trying to add S3DistCp to my local, standalone Spark install. I've downloaded S3DistCp:
aws s3 cp s3://elasticmapreduce/libs/s3distcp/1.latest/s3distcp.jar .
And the AWS SDK as well:
wget http://sdk-for-java.amazonwebservices.com/latest/aws-java-sdk.zip
I extracted the AWS SDK:
unzip aws-java-sdk.zip
Then added s3distcp.jar to my spark-defaults.conf:
spark.driver.extraClassPath /Users/mark.miller/.ivy2/jars/s3distcp.jar
spark.executor.extraClassPath /Users/mark.miller/.ivy2/jars/s3distcp.jar
Then I added the AWS SDK and all it's dependencies to $LIBJARS and $HADOOP_CLASSPATH
export $LIBJARS=/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/lib/aws-java-sdk-1.11.86.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/aspectjrt-1.8.2.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/aspectjweaver.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/commons-codec-1.9.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/commons-logging-1.1.3.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/freemarker-2.3.9.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/httpclient-4.5.2.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/httpcore-4.4.4.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/ion-java-1.0.1.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/jackson-annotations-2.6.0.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/jackson-core-2.6.6.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/jackson-databind-2.6.6.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/jackson-dataformat-cbor-2.6.6.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/javax.mail-api-1.4.6.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/jmespath-java-1.11.86.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/joda-time-2.8.1.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/json-path-2.2.0.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/slf4j-api-1.7.16.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/spring-beans-3.0.7.RELEASE.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/spring-context-3.0.7.RELEASE.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/spring-core-3.0.7.RELEASE.jar,/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/spring-test-3.0.7.RELEASE.jar
export HADOOP_CLASSPATH=$LIBJARS
But when I try to start the pyspark shell:
$ pyspark
I get the following error:
Python 2.7.13 (default, Dec 18 2016, 07:03:39)
[GCC 4.2.1 Compatible Apple LLVM 8.0.0 (clang-800.0.42.1)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
Using Spark's default log4j profile: org/apache/spark/log4j-defaults.properties
Setting default log level to "WARN".
To adjust logging level use sc.setLogLevel(newLevel). For SparkR, use setLogLevel(newLevel).
17/02/06 17:48:50 WARN NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
17/02/06 17:48:50 WARN SparkContext: Another SparkContext is being constructed (or threw an exception in its constructor). This may indicate an error, since only one SparkContext may be running in this JVM (see SPARK-2243). The other SparkContext was created at:
org.apache.spark.api.java.JavaSparkContext.<init>(JavaSparkContext.scala:58)
sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
java.lang.reflect.Constructor.newInstance(Constructor.java:423)
py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:247)
py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
py4j.Gateway.invoke(Gateway.java:236)
py4j.commands.ConstructorCommand.invokeConstructor(ConstructorCommand.java:80)
py4j.commands.ConstructorCommand.execute(ConstructorCommand.java:69)
py4j.GatewayConnection.run(GatewayConnection.java:214)
java.lang.Thread.run(Thread.java:745)
Traceback (most recent call last):
File "/usr/local/Cellar/apache-spark/2.1.0/libexec/python/pyspark/shell.py", line 47, in <module>
spark = SparkSession.builder.getOrCreate()
File "/usr/local/Cellar/apache-spark/2.1.0/libexec/python/pyspark/sql/session.py", line 169, in getOrCreate
sc = SparkContext.getOrCreate(sparkConf)
File "/usr/local/Cellar/apache-spark/2.1.0/libexec/python/pyspark/context.py", line 307, in getOrCreate
SparkContext(conf=conf or SparkConf())
File "/usr/local/Cellar/apache-spark/2.1.0/libexec/python/pyspark/context.py", line 118, in __init__
conf, jsc, profiler_cls)
File "/usr/local/Cellar/apache-spark/2.1.0/libexec/python/pyspark/context.py", line 179, in _do_init
self._jsc = jsc or self._initialize_context(self._conf._jconf)
File "/usr/local/Cellar/apache-spark/2.1.0/libexec/python/pyspark/context.py", line 246, in _initialize_context
return self._jvm.JavaSparkContext(jconf)
File "/usr/local/Cellar/apache-spark/2.1.0/libexec/python/lib/py4j-0.10.4-src.zip/py4j/java_gateway.py", line 1401, in __call__
File "/usr/local/Cellar/apache-spark/2.1.0/libexec/python/lib/py4j-0.10.4-src.zip/py4j/protocol.py", line 319, in get_return_value
py4j.protocol.Py4JJavaError: An error occurred while calling None.org.apache.spark.api.java.JavaSparkContext.
: java.lang.NoClassDefFoundError: Could not initialize class com.google.common.cache.LocalCache
at com.google.common.cache.LocalCache$LocalLoadingCache.<init>(LocalCache.java:4867)
at com.google.common.cache.CacheBuilder.build(CacheBuilder.java:785)
at org.apache.hadoop.security.Groups.<init>(Groups.java:101)
at org.apache.hadoop.security.Groups.<init>(Groups.java:74)
at org.apache.hadoop.security.Groups.getUserToGroupsMappingService(Groups.java:303)
at org.apache.hadoop.security.UserGroupInformation.initialize(UserGroupInformation.java:284)
at org.apache.hadoop.security.UserGroupInformation.ensureInitialized(UserGroupInformation.java:261)
at org.apache.hadoop.security.UserGroupInformation.loginUserFromSubject(UserGroupInformation.java:791)
at org.apache.hadoop.security.UserGroupInformation.getLoginUser(UserGroupInformation.java:761)
at org.apache.hadoop.security.UserGroupInformation.getCurrentUser(UserGroupInformation.java:634)
at org.apache.spark.util.Utils$$anonfun$getCurrentUserName$1.apply(Utils.scala:2373)
at org.apache.spark.util.Utils$$anonfun$getCurrentUserName$1.apply(Utils.scala:2373)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.util.Utils$.getCurrentUserName(Utils.scala:2373)
at org.apache.spark.SparkContext.<init>(SparkContext.scala:295)
at org.apache.spark.api.java.JavaSparkContext.<init>(JavaSparkContext.scala:58)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:247)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:236)
at py4j.commands.ConstructorCommand.invokeConstructor(ConstructorCommand.java:80)
at py4j.commands.ConstructorCommand.execute(ConstructorCommand.java:69)
at py4j.GatewayConnection.run(GatewayConnection.java:214)
at java.lang.Thread.run(Thread.java:745)
If I remove s3distcp.jar from spark-defaults.conf the error goes away. There just doesn't seem to be much documentation on how to deploy this since it's provided as part of EMR.
I was able to get this working by passing --driver-class-path to pyspark:
$ pyspark \
--driver-class-path \
~/Downloads/aws-java-sdk-1.11.86/lib/aws-java-sdk-1.11.86.jar:\
~/Downloads/aws-java-sdk-1.11.86/third-party/lib/*
To set this up in spark-defaults.conf I had to do it this way:
spark.jars /Users/mark.miller/.ivy2/jars/s3distcp.jar
spark.driver.extraClassPath /Users/mark.miller/Downloads/aws-java-sdk-1.11.86/lib/aws-java-sdk-1.11.86.jar:/Users/mark.miller/Downloads/aws-java-sdk-1.11.86/third-party/lib/*
I also learned that spark.executor.extraClassPath is only needed for backwards-compatibility with older versions of spark (https://spark.apache.org/docs/latest/configuration.html#runtime-environment)

get quite a lot error when install spark

Python 3.5.2 |Anaconda 4.1.1 (x86_64)| (default, Jul 2 2016, 17:52:12)
[GCC 4.2.1 Compatible Apple LLVM 4.2 (clang-425.0.28)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
Using Spark's default log4j profile: org/apache/spark/log4j-defaults.properties
Setting default log level to "WARN".
To adjust logging level use sc.setLogLevel(newLevel). For SparkR, use setLogLevel(newLevel).
17/01/08 15:27:58 WARN SparkContext: Support for Java 7 is deprecated as of Spark 2.0.0
17/01/08 15:28:03 WARN NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
17/01/08 15:28:08 WARN SparkContext: Another SparkContext is being constructed (or threw an exception in its constructor). This may indicate an error, since only one SparkContext may be running in this JVM (see SPARK-2243). The other SparkContext was created at:
org.apache.spark.api.java.JavaSparkContext.<init>(JavaSparkContext.scala:58)
sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
java.lang.reflect.Constructor.newInstance(Constructor.java:526)
py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:247)
py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
py4j.Gateway.invoke(Gateway.java:236)
py4j.commands.ConstructorCommand.invokeConstructor(ConstructorCommand.java:80)
py4j.commands.ConstructorCommand.execute(ConstructorCommand.java:69)
py4j.GatewayConnection.run(GatewayConnection.java:214)
java.lang.Thread.run(Thread.java:745)
17/01/08 15:28:08 WARN SparkContext: Support for Java 7 is deprecated as of Spark 2.0.0
Traceback (most recent call last):
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/shell.py", line 43, in <module>
spark = SparkSession.builder\
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/sql/session.py", line 169, in getOrCreate
sc = SparkContext.getOrCreate(sparkConf)
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/context.py", line 307, in getOrCreate
SparkContext(conf=conf or SparkConf())
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/context.py", line 118, in __init__
conf, jsc, profiler_cls)
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/context.py", line 179, in _do_init
self._jsc = jsc or self._initialize_context(self._conf._jconf)
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/context.py", line 246, in _initialize_context
return self._jvm.JavaSparkContext(jconf)
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/lib/py4j-0.10.4-src.zip/py4j/java_gateway.py", line 1401, in __call__
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/lib/py4j-0.10.4-src.zip/py4j/protocol.py", line 319, in get_return_value
py4j.protocol.Py4JJavaError: An error occurred while calling None.org.apache.spark.api.java.JavaSparkContext.
: java.lang.ExceptionInInitializerError
at org.apache.spark.SparkContext.<init>(SparkContext.scala:397)
at org.apache.spark.api.java.JavaSparkContext.<init>(JavaSparkContext.scala:58)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:247)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:236)
at py4j.commands.ConstructorCommand.invokeConstructor(ConstructorCommand.java:80)
at py4j.commands.ConstructorCommand.execute(ConstructorCommand.java:69)
at py4j.GatewayConnection.run(GatewayConnection.java:214)
at java.lang.Thread.run(Thread.java:745)
Caused by: java.net.UnknownHostException: Chenhuis-MacBook-Pro.local: Chenhuis-MacBook-Pro.local: nodename nor servname provided, or not known
at java.net.InetAddress.getLocalHost(InetAddress.java:1475)
at org.apache.spark.util.Utils$.findLocalInetAddress(Utils.scala:870)
at org.apache.spark.util.Utils$.org$apache$spark$util$Utils$$localIpAddress$lzycompute(Utils.scala:863)
at org.apache.spark.util.Utils$.org$apache$spark$util$Utils$$localIpAddress(Utils.scala:863)
at org.apache.spark.util.Utils$$anonfun$localHostName$1.apply(Utils.scala:920)
at org.apache.spark.util.Utils$$anonfun$localHostName$1.apply(Utils.scala:920)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.util.Utils$.localHostName(Utils.scala:920)
at org.apache.spark.internal.config.package$.<init>(package.scala:189)
at org.apache.spark.internal.config.package$.<clinit>(package.scala)
... 13 more
Caused by: java.net.UnknownHostException: Chenhuis-MacBook-Pro.local: nodename nor servname provided, or not known
at java.net.Inet6AddressImpl.lookupAllHostAddr(Native Method)
at java.net.InetAddress$1.lookupAllHostAddr(InetAddress.java:901)
at java.net.InetAddress.getAddressesFromNameService(InetAddress.java:1295)
at java.net.InetAddress.getLocalHost(InetAddress.java:1471)
... 22 more
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/shell.py", line 47, in <module>
spark = SparkSession.builder.getOrCreate()
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/sql/session.py", line 169, in getOrCreate
sc = SparkContext.getOrCreate(sparkConf)
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/context.py", line 307, in getOrCreate
SparkContext(conf=conf or SparkConf())
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/context.py", line 118, in __init__
conf, jsc, profiler_cls)
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/context.py", line 179, in _do_init
self._jsc = jsc or self._initialize_context(self._conf._jconf)
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/pyspark/context.py", line 246, in _initialize_context
return self._jvm.JavaSparkContext(jconf)
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/lib/py4j-0.10.4-src.zip/py4j/java_gateway.py", line 1401, in __call__
File "/Users/ChenhuiChen/Downloads/spark-2.1.0-bin-hadoop2.7/python/lib/py4j-0.10.4-src.zip/py4j/protocol.py", line 319, in get_return_value
py4j.protocol.Py4JJavaError: An error occurred while calling None.org.apache.spark.api.java.JavaSparkContext.
: java.lang.NoClassDefFoundError: Could not initialize class org.apache.spark.internal.config.package$
at org.apache.spark.SparkContext.<init>(SparkContext.scala:397)
at org.apache.spark.api.java.JavaSparkContext.<init>(JavaSparkContext.scala:58)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:247)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:236)
at py4j.commands.ConstructorCommand.invokeConstructor(ConstructorCommand.java:80)
at py4j.commands.ConstructorCommand.execute(ConstructorCommand.java:69)
at py4j.GatewayConnection.run(GatewayConnection.java:214)
at java.lang.Thread.run(Thread.java:745)
I download the Spark from website, couldn't handle it properly in my Computer.... I didn't do anything and just open /bin/pyspark.
Search online long time for solution and no result.
Do I need to "build the Spark JARs"?
I deleted the JAVA 7 (it is really bad idea), and install java 8..
There are steps how to delete the java.
Trouble installing Pyspark

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