Extract specific columns from delimited file (long row to next line) - linux

Want to extract 2 columns from delimited file (delimiter '||') in unix can be easily be done if complete row in on one line like below
foo||bar||baz||quux
by
cut -d'||' -f1 file_name
but in my case records in file for a single row record went to next line for example:
foo||bar||baz||quux||foo||bar||baz||quux||foo||bar||baz||quux
||quux||bar||baz||quux||foo||bar||baz||quux||foo||bar||baz||quux
and its output from above command is
foo
quux
instead should be just "foo" because it is in first column.
file contain in row 1
foo||bar||baz||quux||foo||bar||baz||quux||foo||bar||baz||quux
||quux||bar||baz||quux||foo||bar||baz||quux||foo||bar||baz||quux
file contain in row 2
foo2||bar2||baz2||quux2||foo2||bar2||baz2||quux2||foo2||bar2||baz2||quux2
||quux2||bar2||baz2||quux2||foo2||bar2||baz2||quux2||foo2||bar2||baz2||quux2
output should be
foo
foo2

Almost, but the -d switch only takes one char:
cut -d'|' -f1 file_name
Output:
foo
foo2
Note: since the delimiters are doubled, the -f switch won't work as expected if the field number is greater than 1. One way to handle that is adjust the field to equal "2n-1". So to get field #3, do -f$(( (3*2) - 1 )).

Using awk. Since it's the first field of every other record (NR%2), use:
$ awk -F\| 'NR%2{print $1}' file
foo
foo2
Data (four records):
$ cat file
foo||bar||baz||quux||foo||bar||baz||quux||foo||bar||baz||quux
||quux||bar||baz||quux||foo||bar||baz||quux||foo||bar||baz||quux
foo2||bar2||baz2||quux2||foo2||bar2||baz2||quux2||foo2||bar2||baz2||quux2
||quux2||bar2||baz2||quux2||foo2||bar2||baz2||quux2||foo2||bar2||baz2||quux2
Interesting phenomenon is that mawk accepts -F"\|\|" (dual pipes) as delimiter but GNU awk doesn't.

Related

Linux split a file in two columns

I have the following file that contains 2 columns :
A:B:IP:80 apples
C:D:IP2:82 oranges
E:F:IP3:84 grapes
How is possible to split the file in 2 other files, each column in a file like this:
File1
A:B:IP:80
C:D:IP2:82
E:F:IP3:84
File2
apples
oranges
grapes
Try:
awk '{print $1>"file1"; print $2>"file2"}' file
After runningl that command, we can verify that the desired files have been created:
$ cat file1
A:B:IP:80
C:D:IP2:82
E:F:IP3:84
And:
$ cat file2
apples
oranges
grapes
How it works
print $1>"file1"
This tells awk to write the first column to file1.
print $2>"file2"
This tells awk to write the second column to file2.
Perl 1-liner using (abusing) the fact that print goes to STDOUT, i.e. file descriptor 1, and warn goes to STDERR, i.e. file descriptor 2:
# perl -n means loop over the lines of input automatically
# perl -e means execute the following code
# chomp means remove the trailing newline from the expression
perl -ne 'chomp(my #cols = split /\s+/); # Split each line on whitespace
print $cols[0] . "\n";
warn $cols[1] . "\n"' <input 1>col1 2>col2
You could, of course, just use cut -b with the appropriate columns, but then you would need to read the file twice.
Here's an awk solution that'll work with any number of columns:
awk '{for(n=1;n<=NF;n++)print $n>"File"n}' input.txt
This steps through each field on the line and prints the field to a different output file based on the column number.
Note that blank fields -- or rather, lines with fewer fields than other lines, will cause line numbers to mismatch. That is, if your input is:
A 1
B
C 3
Then File2 will contain:
1
3
If this is a concern, mention it in an update to your question.
You could of course do this in bash alone, in a number of ways. Here's one:
while read -r line; do
a=($line)
for m in "${!a[#]}"; do
printf '%s\n' "${a[$m]}" >> File$((m+1))
done
done < input.txt
This reads each line of input into $line, then word-splits $line into values in the $a[] array. It then steps through that array, printing each item to the appropriate file, named for the index of the array (plus one, since bash arrays start at zero).

How to use grep or awk to process a specific column ( with keywords from text file )

I've tried many combinations of grep and awk commands to process text from file.
This is a list of customers of this type:
John,Mills,81,Crescent,New York,NY,john#mills.com,19/02/1954
I am trying to separate these records into two categories, MEN and FEMALES.
I have a list of some 5000 Female Names , all in plain text , all in one file.
How can I "grep" the first column ( since I am only matching first names) but still printing the entire customer record ?
I found it easy to "cut" the first column and grep --file=female.names.txt, but this way it's not going to print the entire record any longer.
I am aware of the awk option but in that case I don't know how to read the female names from file.
awk -F ',' ' { if($1==" ???Filename??? ") print $0} '
Many thanks !
You can do this with Awk:
awk -F, 'NR==FNR{a[$0]; next} ($1 in a)' female.names.txt file.csv
Would print the lines of your csv file that contain first names of any found in your file female.names.txt.
awk -F, 'NR==FNR{a[$0]; next} !($1 in a)' female.names.txt file.csv
Would output lines not found in female.names.txt.
This assumes the format of your female.names.txt file is something like:
Heather
Irene
Jane
Try this:
grep --file=<(sed 's/.*/^&,/' female.names.txt) datafile.csv
This changes all the names in the list of female names to the regular expression ^name, so it only matches at the beginning of the line and followed by a comma. Then it uses process substitution to use that as the file to match against the data file.
Another alternative is Perl, which can be useful if you're not super-familiar with awk.
#!/usr/bin/perl -anF,
use strict;
our %names;
BEGIN {
while (<ARGV>) {
chomp;
$names{$_} = 1;
}
}
print if $names{$F[0]};
To run (assume you named this file filter.pl):
perl filter.pl female.names.txt < records.txt
So, I've come up with the following:
Suppose, you have a file having the following lines in a file named test.txt:
abe 123 bdb 532
xyz 593 iau 591
Now you want to find the lines which include the first field having the first and last letters as vowels. If you did a simple grep you would get both of the lines but the following will give you the first line only which is the desired output:
egrep "^([0-z]{1,} ){0}[aeiou][0-z]+[aeiou]" test.txt
Then you want to the find the lines which include the third field having the first and last letters as vowels. Similary, if you did a simple grep you would get both of the lines but the following will give you the second line only which is the desired output:
egrep "^([0-z]{1,} ){2}[aeiou][0-z]+[aeiou]" test.txt
The value in the first curly braces {1,} specifies that the preceding character which ranges from 0 to z according to the ASCII table, can occur any number of times. After that, we have the field separator space in this case. Change the value within the second curly braces {0} or {2} to the desired field number-1. Then, use a regular expression to mention your criteria.

CSV grep but keep the header

I have a CSV file that look like this:
A,B,C
1,2,3
4,4,4
1,2,6
3,6,9
Is there an easy way to grep all the rows in which the B column is 2, and keep the header? For example, I want the output be like
A,B,C
1,2,3
1,2,6
I am working under linux
Using awk:
awk -F, 'NR==1 || $2==2' file
NR==1 -> if first line,
$2==2 -> if second column is equal to 2. Lines are printed if either of the above is true.
To choose the column using the header column name:
awk -F, -v col="B" 'NR==1{for(i=1;i<=NF;i++)if($i==col)break;print;next}$i==2' file
Replace B with the appropriate name of the column which you want to check against.
You can use addresses in sed:
sed -n '1p;/^[^,]*,2/p'
It means:
1p Print the first line.
/ Start a match.
^ Match the beginnning of a line.
[^,] Match anything but a comma
* zero or more times.
, Match a comma.
2 Match a 2.
/p End of match, if it matches, print.
If the header can contain the value you are looking for, you should be more careful:
sed -n '1p;1!{/^[^,]*,2/p}'
1!{ ... } just means "Do the following for lines other then the first one".
For column number n>2, you can add a quantifier:
sed -n '1p;1!{/^\([^,]*,\)\{M\}2/p}'
where M=n-1. The quantifier just means repetition, so the non-comma-0-or-more-times-comma thing is repeated M times.
For true CSV files where a value can contain a comma, switch to Perl and Text::CSV.
$ awk -F, 'NR==1 { for (i=1;i<=NF;i++) h[$i] = i; print; next } $h["B"] == 2' file
A,B,C
1,2,3
1,2,6
By the way, sed is an excellent tool for simple substitutions on a single line, for anything else, just use awk - the code will be clearer and MUCH easier to enhance in future if necessary.

Filtering Rows Based On Number of Columns with AWK

I have lines of data that contain
single column and two columns. What I want to do is to
extract lines that contain only 2 columns.
0333 foo
bar
23243 qux
yielding only:
0333 foo
23243 qux
Note that they are tab separated, even for lines with only one column
you have tab at the beginning.
What's the way to do it?
I tried this but fail:
awk '$1!="";{print $1 "\t" $2}' myfile.txt
enter code here
You need to use the NF (number of fields) variable to control the actions, such as in the following transcript:
$ echo '0333 foo
> bar
> 23243 qux' | awk 'NF==2{print}{}'
0333 foo
23243 qux
This will print the line if the number of fields is two, otherwise it will do nothing. The reason I have the (seemingly) strange construct NF==2{print}{} is because some implementations of awk will print by default if no rules are matched for a line. The empty command {} guarantees that this will not happen.
If you're lucky enough to have one of those that doesn't do this, you can get away with:
awk 'NF==2'
but the first solution above will work in both cases.
awk 'NF==2' file
awk '(NF==2){print}' test.txt

Replacing a column of data in text files with Linux command

I have several text files whose lines are tab-delimited.
The second column contains incorrect data.
How do I change everything in the second column to a specific text string?
awk ' { $2="<STRING>"; print } ' <FILENAME>
cat INFILE | perl -ne '$ln=$_;#x=split(/","/); #a=split(/","/, $ln,8);#b=splice(#a,0,7); $l=join("\",\"", #b); $r=join("\",\"", splice(#x,8)); print "$l\",\"10\",\"$r"'
This is an example that changes the 10th column to "10". I prefer this as I don't have to count the matching parenthesis like in the sed technique.
A simple and cheap hack:
cat INFILE | sed 's/\(.*\)\t\(.*\)\t\(.*\)/\1\tREPLACEMENT\t\3/' > OUTFILE
testing it:
echo -e 'one\ttwo\tthree\none\ttwo\tthree' | sed 's/\(.*\)\t\(.*\)\t\(.*\)/\1\tREPLACEMENT\t\3/'
takes in
one two three
one two three
and produces
one REPLACEMENT three
one REPLACEMENT three

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