How to implement my own HPS algorithm? - audio

I'm starting a project on Python where I need to develop a pitch-detection system, basically what I have to do is to record a sound coming from a guitar string, then Identify which is the tone of that sound.
I have read and searched through websites (including stackoverflow) so I can understand the main ideas of important things like: FFT, Time-domaing, Frecuency-domain, Harmonics, pitch detection algorithms, octave-errors and so on.
After my research I found that I could use HPS (Harmonic Product Spectrum) Algorithm and that algorithm belongs to a frecuency-domain approach, that means that I have to (In general steps):
Record the sound from the guitar (avoid external noises).
Use FFT function so I can transform that audio from a time-domain
to a frecuency-domain (that's what FFT does).
After I get that data (an array) then I have to use HPS so I can
find the highest tone which it will be the tone string sound.
My problem starts in the last step, I have read the ecuation of the HPS and some lectures about that, but I still can't understand it and develop my own function.
Am I missing something or something that I don't understand and I think I do?
I just can't find a way to program my own HPS algorithm.

In the HPS quesion here:
How to get the fundamental frequency using Harmonic Product Spectrum? ,
the number of harmonics considered is 5 (R = 5); and the 5 harmonic spectrums are in hps2 thru hps5 (plus the original FFT spectrum) after downsampling by sequential harmonic ratios.
Then the 5 downsampled spectrums are summed.
Then the entire HPS summing array length is searched to find where the peak or maxima in the summed 5 harmonics is located.
The downsampling and search for the optimal HPS estimate might not be done optimally in that example. But that's a different Q&A (some of which is already in the answers to the above SO question).

I've done this before in few ways (either FFT which is working in Frequency domain or Autocorrelation and AMDF which are working in Time domain).
For me personally Autocorrelation is favourite since it's simple and clear to implement and in your use case, analyzing guitar strings, worked with 100% accuracy. So I can recommend it to you.
I've shared my code before and you can find it fully explained on the following link:
Android: Finding fundamental frequency of audio input

Related

Guitar Chord Detection

While most of the other questions here are regarding determining how to know which notes comprise a chord, I am asking on a slightly different point.
How would you be able to determine whether a sound played is a single note, or a chord? Ive tried searching for some papers but so far, I have only seen papers tackling how to detect the notes of a chord rather than differentiating whether the sound produced was only a single note or a chord.
Thanks!
You would need to do some kind of pattern matching on the power spectrum. For a single note you will see the fundamental + multiple harmonics, all of which are at integer multiples of the fundamental frequency of course. For a chord, e.g. a simple major chord such as C major, which has notes C, E and G, you'll get 3 fundamentals + harmonics of each. Some of the harmonics from the different fundamentals will coincide (due to the almost rational integer ratio between the notes, which is what makes the chord sound "good"), however there will still be intervals between frequency components which are not just straight multiples, and it's the pattern of these that really determines the nature of the chord. It might be a good candidate for some kind of classifier or neural net.
If it's sound like a chord to you, is because you brain is capable of distinguishing the harmonics of the chord.
So when you listen to a chord from a distance the string will be mixed together for the general note of the chord to be heard, that's like you are compressing the sound from many channels into one.
If you record in a good enough quality you should be able to split your sound into different thresholds determined by the notes you are trying to pick up, i.e drop-d, normal tuning.
Try to do the process in a sound editor before trying to tackle it as a program.
You can find any single frequency of any instrument or even noise by using what's called a Fourier Transform. It is a mathematical process in which frequency folding is performed in order to sort each and every tone in the sample you provide. This is similar as to how scientists study the sun and other stars, looking at all the frequency information to see what elements are in what quantities. In my master's thesis, I used what's called a FFT, or fast Fourier Transfer.
You can separate harmonics from pure tones, and much more with the FFT. You will need to use many FFT iterations because you really can't wait for a FFT to decode 'Stairway to Heaven'. Look locally at smaller snippets.
You can find software to do this for you at many places, and you can check out Wolfram Alpha and similar websites for apps and code to do this.

Extracting pitch from singing voice

I'd like to extract the pitch from a singing voice. The track in question contains only a single voice and no other sounds.
I want to know the loudness and perceived pitch frequency at a given point in time. So something like the following:
0.0sec 400Hz -20dB
0.1sec 401Hz -9dB
0.2sec 403Hz -10dB
0.3sec 403Hz -10dB
0.4sec 404Hz -11dB
0.5sec 406Hz -13dB
0.6sec 410Hz -15dB
0.7sec 411Hz -16dB
0.8sec 409Hz -20dB
0.9sec 407Hz -24dB
1.0sec 402Hz -34dB
How might I achieve such an output? I'm interested in slight changes in frequency as apposed to a specific note value. I have some DSP knowledge and I can program in C++ and python but I'd like to avoid reinventing the wheel if possible.
Note that slight changes in frequency in Hz and perceived pitch may not be the same thing. Perceived pitch resolution seems to vary with absolute frequency, duration, and loudness. If you want more accuracy than this, there might be some research papers on estimating the time between each glottal closure (probably using a deconvolution or pattern matching technique), which would give you some sort of pitch period. The simplest pitch estimate might be some form of weighted autocorrelation, for which lots of canned algorithms and code is available.
Since dB is log scale, this measure might be somewhat closer to perceived loudness, but has to be spectrally weighted with some perceptual frequency response curve over some duration of measurement.
There seem to be research papers on both of these topics, as well as many textbooks on human audio perception as well as on common audio DSP techniques.
I suggest you read this article
http://audition.ens.fr/adc/pdf/2002_JASA_YIN.pdf
. This is one of the simplest methods of pitch detection, and it works very well.
Also, for measuring the instantaneous power of the signal, you can just take the absolute value of the signal and divide by 1/√2 (Gives the RMS value) and then smooth it (usually a first order low pass filter). I hope this helps. Good luck!

Real time pitch detection

I'm trying to do real time pitch detection of a users singing, but I'm running into alot of problems. I've tried lots of methods, including FFT (FFT Problem (Returns random results)) and autocorrelation (Autocorrelation pitch detection returns random results with mic input), but I can't seem to get any methods to give a good result. Can anyone suggest a method for real-time pitch tracking or how to improve on a method I already have? I can't seem to find any good C / C++ methods for real time pitch detection.
Thanks,
Niall.
Edit: Just to note, i've checked that the mic input data is correct, and that when using a sine wave the results are more or less the correct pitch.
Edit: Sorry this is late, but at the moment, im visualizing the autocolleration by taking the values out of the results array, and each index, and plotting the index on the X axis and the value on the Y axis (both are divided by 100000 or something, and im using OpenGL), plugging the data into a VST host and using VST plugins isn't an option to me. At the moment, it just looks like some random dots. Am i doing it correctly, or can you please point me torwards some code for doing it or help me understand how to visualize the raw audio data and autocorrelation data.
Taking a step back... To get this working you MUST figure out a way to plot intermediate steps of this process. What you're trying to do is not particularly hard, but it is error prone and fiddly. Clipping, windowing, bad wiring, aliasing, DC offsets, reading the wrong channels, the weird FFT frequency axis, impedance mismatches, frame size errors... who knows. But if you can plot the raw data, and then plot the FFT, all will become clear.
I found several open source implementations of real-time pitch tracking
dywapitchtrack uses a wavelet-based algorithm
"Realtime C# Pitch Tracker" uses a modified autocorrelation approach now removed from Codeplex - try searching on GitHub
aubio (mentioned by piem; several algorithms are available)
There are also some pitch trackers out there which might not be designed for real-time, but may be usable that way for all I know, and could also be useful as a reference to compare your real-time tracker to:
Praat is an open source package sometimes used for pitch extraction by linguists and you can find the algorithm documented at http://www.fon.hum.uva.nl/paul/praat.html
Snack and WaveSurfer also contain a pitch extractor
I know this answer isn't going to make everyone happy but here goes.
This stuff is hard, very hard. Firstly go read as many tutorials as you can find on FFT, Autocorrelation, Wavelets. Although I'm still struggling with DSP I did get some insights from the following.
https://www.coursera.org/course/audio the course isn't running at the moment but the videos are still available.
http://miracle.otago.ac.nz/tartini/papers/Philip_McLeod_PhD.pdf thesis about the development of a pitch recognition algorithm.
http://dsp.stackexchange.com a whole site dedicated to digital signal processing.
If like me you didn't do enough maths to completely follow the tutorials don't give up as some of the diagrams and examples still helped me to understand what was going on.
Next is test data and testing. Write yourself a library that generates test files to use in checking your algorithm/s.
1) A super simple pure sine wave generator. So say you are looking at writing YAT(Yet Another Tuner) then use your sine generator to create a series of files around 440Hz say from 420-460Hz in varying increments and see how sensitive and accurate your code is. Can it resolve to within 5Hz, 1Hz, finer still?
2) Then upgrade your sine wave generator so that it adds a series of weaker harmonics to the signal.
3) Next are real world variations on harmonics. So whilst for most stringed instruments you'll see a series of harmonics as simple multiples of the fundamental frequency F0, for instruments like clarinets and flutes because of the way the air behaves in the chamber the even harmonics will be missing or very weak. And for some instruments F0 is missing but can be determined from the distribution of the other harmonics. F0 being what the human ear perceives as pitch.
4) Throw in some deliberate distortion by shifting the harmonic peak frequencies up and down in an irregular manner
The point being that if you are creating files with known results then its easier to verify that what you are building actually works, bugs aside of course.
There are also a number of "libraries" out there containing sound samples.
https://freesound.org from the Coursera series mentioned above.
http://theremin.music.uiowa.edu/MIS.html
Next be aware that your microphone is not perfect and unless you have spent thousands of dollars on it will have a fairly variable frequency response range. In particular if you are working with low notes then cheaper microphones, read the inbuilt ones in your PC or Phone, have significant rolloff starting at around 80-100Hz. For reasonably good external ones you might get down to 30-40Hz. Go find the data on your microphone.
You can also check what happens by playing the tone through speakers and then recording with you favourite microphone. But of course now we are talking about 2 sets of frequency response curves.
When it comes to performance there are a number of freely available libraries out there although do be aware of the various licensing models.
Above all don't give up after your first couple of tries. Best of luck.
Here's the C++ source code for an unusual two-stage algorithm that I devised which can do Realtime Pitch Detection on polyphonic MP3 files while being played on Windows. This free application (PitchScope Player, available on web) is frequently used to detect the notes of a guitar or saxophone solo upon a MP3 recording. The algorithm is designed to detect the most dominant pitch (a musical note) at any given moment in time within a MP3 music file. Note onsets are accurately inferred by a significant change in the most dominant pitch (a musical note) at any given moment during the MP3 recording.
When a single key is pressed upon a piano, what we hear is not just one frequency of sound vibration, but a composite of multiple sound vibrations occurring at different mathematically related frequencies. The elements of this composite of vibrations at differing frequencies are referred to as harmonics or partials. For instance, if we press the Middle C key on the piano, the individual frequencies of the composite's harmonics will start at 261.6 Hz as the fundamental frequency, 523 Hz would be the 2nd Harmonic, 785 Hz would be the 3rd Harmonic, 1046 Hz would be the 4th Harmonic, etc. The later harmonics are integer multiples of the fundamental frequency, 261.6 Hz ( ex: 2 x 261.6 = 523, 3 x 261.6 = 785, 4 x 261.6 = 1046 ). Linked at the bottom, is a snapshot of the actual harmonics which occur during a polyphonic MP3 recording of a guitar solo.
Instead of a FFT, I use a modified DFT transform, with logarithmic frequency spacing, to first detect these possible harmonics by looking for frequencies with peak levels (see diagram below). Because of the way that I gather data for my modified Log DFT, I do NOT have to apply a Windowing Function to the signal, nor do add and overlap. And I have created the DFT so its frequency channels are logarithmically located in order to directly align with the frequencies where harmonics are created by the notes on a guitar, saxophone, etc.
Now being retired, I have decided to release the source code for my pitch detection engine within a free demonstration app called PitchScope Player. PitchScope Player is available on the web, and you could download the executable for Windows to see my algorithm at work on a mp3 file of your choosing. The below link to GitHub.com will lead you to my full source code where you can view how I detect the harmonics with a custom Logarithmic DFT transform, and then look for partials (harmonics) whose frequencies satisfy the correct integer relationship which defines a 'pitch'.
My Pitch Detection Algorithm is actually a two-stage process: a) First the ScalePitch is detected ('ScalePitch' has 12 possible pitch values: {E, F, F#, G, G#, A, A#, B, C, C#, D, D#} ) b) and after ScalePitch is determined, then the Octave is calculated by examining all the harmonics for the 4 possible Octave-Candidate notes. The algorithm is designed to detect the most dominant pitch (a musical note) at any given moment in time within a polyphonic MP3 file. That usually corresponds to the notes of an instrumental solo. Those interested in the C++ source code for my Two-Stage Pitch Detection algorithm might want to start at the Estimate_ScalePitch() function within the SPitchCalc.cpp file at GitHub.com.
https://github.com/CreativeDetectors/PitchScope_Player
Below is the image of a Logarithmic DFT (created by my C++ software) for 3 seconds of a guitar solo on a polyphonic mp3 recording. It shows how the harmonics appear for individual notes on a guitar, while playing a solo. For each note on this Logarithmic DFT we can see its multiple harmonics extending vertically, because each harmonic will have the same time-width. After the Octave of the note is determined, then we know the frequency of the Fundamental.
I had a similar problem with microphone input on a project I did a few years back - turned out to be due to a DC offset.
Make sure you remove any bias before attempting FFT or whatever other method you are using.
It is also possible that you are running into headroom or clipping problems.
Graphs are the best way to diagnose most problems with audio.
Take a look at this sample application:
http://www.codeproject.com/KB/audio-video/SoundCatcher.aspx
I realize the app is in C# and you need C++, and I realize this is .Net/Windows and you're on a mac... But I figured his FFT implementation might be a starting reference point. Try to compare your FFT implementation to his. (His is the iterative, breadth-first version of Cooley-Tukey's FFT). Are they similar?
Also, the "random" behavior you're describing might be because you're grabbing data returned by your sound card directly without assembling the values from the byte-array properly. Did you ask your sound card to sample 16 bit values, and then gave it a byte-array to store the values in? If so, remember that two consecutive bytes in the returned array make up one 16-bit audio sample.
Java code for a real-time real detector is available at http://code.google.com/p/freqazoid/.
It works fairly well on any computer running post-2008 real-time Java. The project has been dropped and could be picked up by any interested party. Contact me if you want further details.
Check out aubio, and open source library which includes several state-of-the-art methods for pitch tracking.
I have asked a similar question here:
C/C++/Obj-C Real-time algorithm to ascertain Note (not Pitch) from Vocal Input
EDIT:
Performous contains a C++ module for realtime pitch detection
Also Yin Pitch-Tracking algorithm
You could do real time pitch detection, be it of a singer's voice, with TarsosDSP
https://github.com/JorenSix/TarsosDSP
just in case anyone hasn't heard of it yet :-)
Can you adapt anything from instrument tuners? My delightfully compact guitar tuner is able to detect the pitch of the strings pretty well. I see this reference to a piano tuner which explains an algorithm to some extent.
Here are some open source libraries that implement pitch detection:
WORLD : speech analysis/synthesis toolkit. This is especially suitable if your source signal is voice.
aubio : audio feature extraction library. Implements many pitch detection algorithms.
Pitch detection : a collection of pitch detection algorithms implemented in C++.
dywapitchtrack : a high quality pitch detection algorithm.
YIN : another implementation of the YIN algorithm in a single C++ source file.

Pitch recognition of musical notes on a smart phone

With limited resources such as slower CPUs, code size and RAM, how best to detect the pitch of a musical note, similar to what an electronic or software tuner would do?
Should I use:
Kiss FFT
FFTW
Discrete Wavelet Transform
autocorrelation
zero crossing analysis
octave-spaced filters
other?
In a nutshell, what I am trying to do is to recognize a single musical note, two octaves below middle-C to two octaves above, played on any (reasonable) instrument. I'd like to be within 20% of the semitone - in other words, if the user plays too flat or too sharp, I need to distinguish that. However, I will not need the accuracy required for tuning.
If you don't need that much accuracy, an FFT could be sufficient. Window the chunk of audio first so that you get well-defined peaks, then find the first significant peak.
Bin width = sampling rate / FFT size:
Fundamentals range from 20 Hz to 7 kHz, so a sampling rate of 14 kHz would be enough. The next "standard" sampling rate is 22050 Hz.
The FFT size is then determined by the precision you want. FFT output is linear in frequency, while musical tones are logarithmic in frequency, so the worst case precision will be at low frequencies. For 20% of a semitone at 20 Hz, you need a width of 1.2 Hz, which means an FFT length of 18545. The next power of two is 215 = 32768. This is 1.5 seconds of data, and takes my laptop's processor 3 ms to calculate.
This won't work with signals that have a "missing fundamental", and finding the "first significant" peak is somewhat difficult (since harmonics are often higher than the fundamental), but you can figure out a way that suits your situation.
Autocorrelation and harmonic product spectrum are better at finding the true fundamental for a wave instead of one of the harmonics, but I don't think they deal as well with inharmonicity, and most instruments like piano or guitar are inharmonic (harmonics are slightly sharp from what they should be). It really depends on your circumstances, though.
Also, you can save even more processor cycles by computing only within a specific frequency band of interest, using the Chirp-Z transform.
I've written up a few different methods in Python for comparison purposes.
If you want to do pitch recognition in realtime (and accurate to within 1/100 of a semi-tone), your only real hope is the zero-crossing approach. And it's a faint hope, sorry to say. Zero-crossing can estimate pitch from just a couple of wavelengths of data, and it can be done with a smartphone's processing power, but it's not especially accurate, as tiny errors in measuring the wavelengths result in large errors in the estimated frequency. Devices like guitar synthesizers (which deduce the pitch from a guitar string with just a couple of wavelengths) work by quantizing the measurements to notes of the scale. This may work for your purposes, but be aware that zero-crossing works great with simple waveforms, but tends to work less and less well with more complex instrument sounds.
In my application (a software synthesizer that runs on smartphones) I use recordings of single instrument notes as the raw material for wavetable synthesis, and in order to produce notes at a particular pitch, I need to know the fundamental pitch of a recording, accurate to within 1/1000 of a semi-tone (I really only need 1/100 accuracy, but I'm OCD about this). The zero-crossing approach is much too inaccurate for this, and FFT-based approaches are either way too inaccurate or way too slow (or both sometimes).
The best approach that I've found in this case is to use autocorrelation. With autocorrelation you basically guess the pitch and then measure the autocorrelation of your sample at that corresponding wavelength. By scanning through the range of plausible pitches (say A = 55 Hz thru A = 880 Hz) by semi-tones, I locate the most-correlated pitch, then do a more finely-grained scan in the neighborhood of that pitch to get a more accurate value.
The approach best for you depends entirely on what you're trying to use this for.
I'm not familiar with all the methods you mention, but what you choose should depend primarily on the nature of your input data. Are you analysing pure tones, or does your input source have multiple notes? Is speech a feature of your input? Are there any limitations on the length of time you have to sample the input? Are you able to trade off some accuracy for speed?
To some extent what you choose also depends on whether you would like to perform your calculations in time or in frequency space. Converting a time series to a frequency representation takes time, but in my experience tends to give better results.
Autocorrelation compares two signals in the time domain. A naive implementation is simple but relatively expensive to compute, as it requires pair-wise differencing between all points in the original and time-shifted signals, followed by differentiation to identify turning points in the autocorrelation function, and then selection of the minimum corresponding to the fundamental frequency. There are alternative methods. For example, Average Magnitude Differencing is a very cheap form of autocorrelation, but accuracy suffers. All autocorrelation techniques run the risk of octave errors, since peaks other than the fundamental exist in the function.
Measuring zero-crossing points is simple and straightforward, but will run into problems if you have multiple waveforms present in the signal.
In frequency-space, techniques based on FFT may be efficient enough for your purposes. One example is the harmonic product spectrum technique, which compares the power spectrum of the signal with downsampled versions at each harmonic, and identifies the pitch by multiplying the spectra together to produce a clear peak.
As ever, there is no substitute for testing and profiling several techniques, to empirically determine what will work best for your problem and constraints.
An answer like this can only scratch the surface of this topic. As well as the earlier links, here are some relevant references for further reading.
Summary of pitch detection algorithms (Wikipedia)
Pros and cons of Autocorrelation vs Harmonic Product Spectrum
A high-level overview of pitch detection methods
In my project danstuner, I took code from Audacity. It essentially took an FFT, then found the peak power by putting a cubic curve on the FFT and finding the peak of that curve. Works pretty well, although I had to guard against octave-jumping.
See Spectrum.cpp.
Zero crossing won't work because a typical sound has harmonics and zero-crossings much more than the base frequency.
Something I experimented with (as a home side project) was this:
Sample the sound with ADC at whatever sample rate you need.
Detect the levels of the short-term positive and negative peaks of the waveform (sliding window or similar). I.e. an envelope detector.
Make a square wave that goes high when the waveform goes within 90% (or so) of the positive envelope, and goes low when the waveform goes within 90% of the negative envelope. I.e. a tracking square wave with hysteresis.
Measure the frequency of that square wave with straight-forward count/time calculations, using as many samples as you need to get the required accuracy.
However I found that with inputs from my electronic keyboard, for some instrument sounds it managed to pick up 2× the base frequency (next octave). This was a side project and I never got around to implementing a solution before moving on to other things. But I thought it had promise as being much less CPU load than FFT.

How do you analyse the fundamental frequency of a PCM or WAV sample? [closed]

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I have a sample held in a buffer from DirectX. It's a sample of a note played and captured from an instrument. How do I analyse the frequency of the sample (like a guitar tuner does)? I believe FFTs are involved, but I have no pointers to HOWTOs.
The FFT can help you figure out where the frequency is, but it can't tell you exactly what the frequency is. Each point in the FFT is a "bin" of frequencies, so if there's a peak in your FFT, all you know is that the frequency you want is somewhere within that bin, or range of frequencies.
If you want it really accurate, you need a long FFT with a high resolution and lots of bins (= lots of memory and lots of computation). You can also guess the true peak from a low-resolution FFT using quadratic interpolation on the log-scaled spectrum, which works surprisingly well.
If computational cost is most important, you can try to get the signal into a form in which you can count zero crossings, and then the more you count, the more accurate your measurement.
None of these will work if the fundamental is missing, though. :)
I've outlined a few different algorithms here, and the interpolated FFT is usually the most accurate (though this only works when the fundamental is the strongest harmonic - otherwise you need to be smarter about finding it), with zero-crossings a close second (though this only works for waveforms with one crossing per cycle). Neither of these conditions is typical.
Keep in mind that the partials above the fundamental frequency are not perfect harmonics in many instruments, like piano or guitar. Each partial is actually a little bit out of tune, or inharmonic. So the higher-frequency peaks in the FFT will not be exactly on the integer multiples of the fundamental, and the wave shape will change slightly from one cycle to the next, which throws off autocorrelation.
To get a really accurate frequency reading, I'd say to use the autocorrelation to guess the fundamental, then find the true peak using quadratic interpolation. (You can do the autocorrelation in the frequency domain to save CPU cycles.) There are a lot of gotchas, and the right method to use really depends on your application.
There are also other algorithms that are time-based, not frequency based.
Autocorrelation is a relatively simple algorithm for pitch detection.
Reference: http://cnx.org/content/m11714/latest/
I have written c# implementations of autocorrelation and other algorithms that are readable. Check out http://code.google.com/p/yaalp/.
http://code.google.com/p/yaalp/source/browse/#svn/trunk/csaudio/WaveAudio/WaveAudio
Lists the files, and PitchDetection.cs is the one you want.
(The project is GPL; so understand the terms if you use the code).
Guitar tuners don't use FFT's or DFT's. Usually they just count zero crossings. You might not get the fundamental frequency because some waveforms have more zero crossings than others but you can usually get a multiple of the fundamental frequency that way. That's enough to get the note although you might be one or more octaves off.
Low pass filtering before counting zero crossings can usually get rid of the excess zero crossings. Tuning the low pass filter requires some knowlegde of the range of frequency you want to detect though
FFTs (Fast-Fourier Transforms) would indeed be involved. FFTs allow you to approximate any analog signal with a sum of simple sine waves of fixed frequencies and varying amplitudes. What you'll essentially be doing is taking a sample and decomposing it into amplitude->frequency pairs, and then taking the frequency that corresponds to the highest amplitude.
Hopefully another SO reader can fill the gaps I'm leaving between the theory and the code!
A little more specifically:
If you start with the raw PCM in an input array, what you basically have is a graph of wave amplitude vs time.Doing a FFT will transform that to a frequency histogram for frequencies from 0 to 1/2 the input sampling rate. The value of each entry in the result array will be the 'strength' of the corresponding sub-frequency.
So to find the root frequency given an input array of size N sampled at S samples/second:
FFT(N, input, output);
max = max_i = 0;
for(i=0;i<N;i++)
if (output[i]>max) max_i = i;
root = S/2.0 * max_i/N ;
Retrieval of fundamental frequencies in a PCM audio signal is a difficult task, and there would be a lot to talk about it...
Anyway, usually time-based method are not suitable for polyphonic signals, because a complex wave given by the sum of different harmonic components due to multiple fundamental frequencies has a zero-crossing rate which depends only from the lowest frequency component...
Also in the frequency domain the FFT is not the most suitable method, since frequency spacing between notes follow an exponential scale, not linear. This means that a constant frequency resolution, used in the FFT method, may be insufficient to resolve lower frequency notes if the size of the analysis window in the time domain is not large enough.
A more suitable method would be a constant-Q transform, which is DFT applied after a process of low-pass filtering and decimation by 2 (i.e. halving each step the sampling frequency) of the signal, in order to obtain different subbands with different frequency resolution. In this way the calculation of DFT is optimized. The trouble is that also time resolution is variable, and increases for the lower subbands...
Finally, if we are trying to estimate the fundamental frequency of a single note, FFT/DFT methods are ok. Things change for a polyphonic context, in which partials of different sounds overlap and sum/cancel their amplitude depending from their phase difference, and so a single spectral peak could belong to different harmonic contents (belonging to different notes). Correlation in this case don't give good results...
Apply a DFT and then derive the fundamental frequency from the results. Googling around for DFT information will give you the information you need -- I'd link you to some, but they differ greatly in expectations of math knowledge.
Good luck.

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