du linux command size greater than df - linux

I am using Digi embedded linux module which is having 8MB flash and 16MB RAM.
My partition table is as below:
SO, I got 4.4MB for rootfs. And 2MB for UserFS.
When I run ‘df -ah’, I get following output.
However, when I run ‘du -sh’ on root, I have 4M in /lib and 3M in /usr. Both are under root. However, the root is only 4.4M.
I have checked for symbolic link and can confirm that the files are physically present on /lib and /usr.
I deleted some of the library files(netsnmp) under /lib, which was close to 2M, but the available size on /dev/root only increased by ~390K(from 408K to 792K).
This suggests that the /lib/libnetsnmp* were stored somewhere else. I am not sure where those files were saved. Any ideas?
Also, please note that the rootfs image size is 4M. And this is shown correctly in df -ah command on /dev/root filesystem.

JFFS2 has transparent compression built in if I recall correctly. Executables compress pretty well.

if the file is in use. you can't delete it really.
you can use lsof | grep deleted to find them.

Probably it is due to the existence of hard-links in the root filesystem. Each hard-link will be shown as a normal file, but all hard-links will point to the same inode, so physically there is only one copy of the file in the hard-disk. You can see a good definition of soft-link and hard-link in this link.
EDIT: You can search for hard-links using this command (taken from this answer):
find . -samefile /path/to/file

Related

No space left on device- Ubuntu Issues

I am getting this error "OSError: [Errno 28] No space left on device" when I am writing files in a directory. I am downloading images programmatically from different sources and creating directories according to day wise. Its working well on windows though.
While checking inodes I got this
I tried different solution like deleting the deleting the junk file and tmp folder but still no success.
What could be the issue?
inodes don't directly correlate with disk usage. Better use df -h to actually see, if your drive is full.
But as you get the error: Yep, it's full. Up to the brim.
You probably have some data some where that uses all that precious storage. Check your home directory with du -hs * | sort -h. This can take a moment, but it will show you the size of all files and directories in the current workdir (and sort it too).
Also directories to check would be /opt, /var and /tmp. Don't randomly delete stuff in /var though, if you don't know what you are doing.
I've listed /tmp here too, because you don't have listed it as a mount of the type tmpfs. You should fix that probably.

How to list recently deleted files from a directory?

I'm not even sure if this is easily possible, but I would like to list the files that were recently deleted from a directory, recursively if possible.
I'm looking for a solution that does not require the creation of a temporary file containing a snapshot of the original directory structure against which to compare, because write access might not always be available. Edit: If it's possible to achieve the same result by storing the snapshot in a shell variable instead of a file, that would solve my problem.
Something like:
find /some/directory -type f -mmin -10 -deletedFilesOnly
Edit: OS: I'm using Ubuntu 14.04 LTS, but the command(s) would most likely be running in a variety of Linux boxes or Docker containers, most or all of which should be using ext4, and to which I would most likely not have access to make modifications.
You can use the debugfs utility,
debugfs is a simple to use RAM-based file system specially designed
for debugging purposes
First, run debugfs /dev/hda13 in your terminal (replacing /dev/hda13 with your own disk/partition).
(NOTE: You can find the name of your disk by running df / in the terminal).
Once in debug mode, you can use the command lsdel to list inodes corresponding with deleted files.
When files are removed in linux they are only un-linked but their
inodes (addresses in the disk where the file is actually present) are
not removed
To get paths of these deleted files you can use debugfs -R "ncheck 320236" replacing the number with your particular inode.
Inode Pathname
320236 /path/to/file
From here you can also inspect the contents of deleted files with cat. (NOTE: You can also recover from here if necessary).
Great post about this here.
So a few things:
You may have zero success if your partition is ext2; it works best with ext4
df /
Fill mount point with result from #2, in my case:
sudo debugfs /dev/mapper/q4os--desktop--vg-root
lsdel
q (to exit out of debugfs)
sudo debugfs -R 'ncheck 528754' /dev/sda2 2>/dev/null (replace number with one from step #4)
Thanks for your comments & answers guys. debugfs seems like an interesting solution to the initial requirements, but it is a bit overkill for the simple & light solution I was looking for; if I'm understanding correctly, the kernel must be built with debugfs support and the target directory must be in a debugfs mount. Unfortunately, that won't really work for my use-case; I must be able to provide a solution for existing, "basic" kernels and directories.
As this seems virtually impossible to accomplish, I've been able to negotiate and relax the requirements down to listing the amount of files that were recently deleted from a directory, recursively if possible.
This is the solution I ended up implementing:
A simple find command piped into wc to count the original number of files in the target directory (recursively). The result can then easily be stored in a shell or script variable, without requiring write access to the file system.
DEL_SCAN_ORIG_AMOUNT=$(find /some/directory -type f | wc -l)
We can then run the same command again later to get the updated number of files.
DEL_SCAN_NEW_AMOUNT=$(find /some/directory -type f | wc -l)
Then we can store the difference between the two in another variable and update the original amount.
DEL_SCAN_DEL_AMOUNT=$(($DEL_SCAN_ORIG_AMOUNT - $DEL_SCAN_NEW_AMOUNT));
DEL_SCAN_ORIG_AMOUNT=$DEL_SCAN_NEW_AMOUNT
We can then print a simple message if the number of files went down.
if [ $DEL_SCAN_DEL_AMOUNT -gt 0 ]; then echo "$DEL_SCAN_DEL_AMOUNT deleted files"; fi;
Return to step 2.
Unfortunately, this solution won't report anything if the same amount of files have been created and deleted during an interval, but that's not a huge issue for my use case.
To circumvent this, I'd have to store the actual list of files instead of the amount, but I haven't been able to make that work using shell variables. If anyone could figure that out, I'd help me immensely as it would meet the initial requirements!
I'd also like to know if anyone has comments on either of the two approaches.
Try:
lsof -nP | grep -i deleted
history >> history.txt
Look for all rm statements.

grub error 15: file not found

I have a vm(on vmware fully running). But i want to do some modification and put all file system to single partition /.
In my current VM i have /, /var, /tmp, /boot partition.
Action performed:
Attached new hard disk, formatted and created two partition (one for / and another for swap)
made / as active partition for root.
copied all the files from original hard disk to new harddisk.
made changes in /etc/fstab and run grub-install.
detached new harddisk and created new VM using this harddisk.
Now when I am starting VM, I got
"Error 15: File not found"
Just got answer while hitting and trying . This error is due to /etc/grub/grub.conf file. When we have /boot partition we don't need to give whole path for kernel for example :
Kernel /< kernel version>
but when we have single root partition only, means no /boot partition we need to provide complete path, example:
Kernel /boot/< kernel version>
And same for initrd line.
It worked for me.

Add files to VFAT image without mounting

I want to create a new VFAT image and add a few files to it.
# Create file of 1MB size:
dd if=/dev/zero of=my-image.fat count=1 bs=1M
# Format file as VFAT:
mkfs.vfat ./my-image.fat
Now I want to add the files ./abc, ./def and ./ghi to the image.
How do I do that without mount -o loop or fusermount?
I only want to write to a new, empty, pristine VFAT image.
I don't need deleting appending or any "complicated" operations.
I tried 7z -a because 7zip can read VFAT images, but it does not know how to write to it.
I want to do the exact same thing as part of an image build for an embedded system. It's really annoying that the entire build, which takes ~3hrs, could be completely unattended except for the final steps which required a password in order to mount a VFAT image. Fortunately, I found a set of tools which solve the problem.
You want mcopy provided by GNU mtools.
Mtools is a collection of utilities to access MS-DOS disks from GNU and Unix without mounting them.
It also supports disk images such as VFAT image files.
As an example, the following command will copy the file hello.txt from your current directory into the subdirectory subdir of the VFAT file system in ~/images/fat_file.img:
mcopy -i ~/images/fat_file.img hello.txt ::subdir/hello.txt
There are more useful inclusions in mtools, such as mdir and mtype which are great for inspecting your image file without having to mount it.
mdir -i ~/images/fat_file.img ::
mdir -i ~/images/fat_file.img ::subdir
mtype -i ~/imags/fat_file.img ::subdir/hello.txt
What you want is basically impossible. You can't just "stuff" some file data onto the end of a disk image and have those files magically "appear" within the image. Feel free to stuff in the data, but there's more to a filesystem than just the data. You have to EXACTLY replicate the metadata operations that the file system handles for you, e.g. updating the FAT tables.
In other words, you'd have to build the ENTIRE FAT filesystem handling code in your own code. Which is utterly ludicrous. Just mount the image, use normal file operations on that mounted file system, then dismount it again. Boom, done.

Is there a way to wait until root filesystem is mounted?

I have a statically linked code(not a module) in kernel that should launch kernel thread after root file system is mounted. The problem is I don't know how to do this without modifying prepare_namespace() kernel function. I thought it's possible to do via initcalls but
they're executed before kernel takes care about rootfs.
Does anyone know the best way to do this?
UPDATE [1]: #BenVoigit suggested the following solution in comments:
Seems like you should open /proc/mounts and poll_wait on it. See the source for `mounts_poll'
UPDATE [2]: I looked at RSBAC patches, RSBAC modifies prepare_namespace() function to make some actions after filesystem is mounted. It seems to be the easiest way.
Well, current Linux images are too big to fit the PC boot sector. Modern bootloaders like grub will mount an small filesystem in RAM before the real one.
To understand what is happening under the hood, you can open the disk image located under /boot. For example, in Ubuntu:
mkdir test
cd test
zcat /boot/initrd.img-2.6.35-24-generic > image.cpio
cpio -i < image.cpio
vim init
In the end, it's just a bunch of shell scripts - the simplicity is almost poetic.

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