Add start and end attribute to node and edge in gexf file - python-3.x

I have a .gexf file that contains nodes and edges with IDs and labels. I generated this .gexffile from a .gml file using networkx. Here's the code for that:
import networkx as nx
G = nx.read_gml('data/gml/test.gml') # read in gml file as Graph
nx.write_gexf(G, "output/test.gexf") # write to gexf format
The next thing I want to do, is to add a startand end attribute to every node and every edge in my file.
So basically, I want this:
<?xml version='1.0' encoding='utf-8'?>
<gexf version="1.1" xmlns="http://www.gexf.net/1.1draft" xmlns:viz="http://www.gexf.net/1.1draft/viz" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.w3.org/2001/XMLSchema-instance">
<graph defaultedgetype="undirected" mode="static">
<nodes>
<node id="clock" label="clock" />
<node id="beach" label="beach" />
<node id="sun" label="sun" />
<node id="sea" label="sea" />
<node id="sand" label="sand" />
<node id="guitar" label="guitar" />
(...)
</nodes>
<edges>
<edge id="0" source="ice" target="shoe" weight="0.9995600294856769" />
<edge id="1" source="ice" target="toothbrush" weight="0.9992457544219484" />
<edge id="1533" source="snake" target="ant" weight="0.9999144063155566" />
(...)
<edge id="1534" source="mosquito" target="jellyfish" weight="0.9994175606336606" />
<edge id="1535" source="ant" target="star" weight="0.9994226236705537" />
</edges>
</graph>
</gexf>
to look like this (note the dynamicmode and start and end attributes):
<?xml version='1.0' encoding='utf-8'?>
<gexf version="1.1" xmlns="http://www.gexf.net/1.1draft" xmlns:viz="http://www.gexf.net/1.1draft/viz" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://www.w3.org/2001/XMLSchema-instance">
<graph defaultedgetype="undirected" mode="dynamic">
<nodes>
<node id="clock" label="clock" start="2000-02-20" end="2000-02-22" />
<node id="beach" label="beach" start="2000-02-20" end="2000-02-22" />
<node id="sun" label="sun" start="2000-02-20" end="2000-02-22" />
<node id="sea" label="sea" start="2000-02-20" end="2000-02-22" />
<node id="sand" label="sand" start="2000-02-20" end="2000-02-22" />
<node id="guitar" label="guitar" start="2000-02-20" end="2000-02-22" />
(...)
</nodes>
<edges>
<edge id="0" source="ice" target="shoe" weight="0.9995600294856769" start="2000-02-20" end="2000-02-22" />
<edge id="1" source="ice" target="toothbrush" weight="0.9992457544219484" start="2000-02-20" end="2000-02-22" />
<edge id="1533" source="snake" target="ant" weight="0.9999144063155566" start="2000-02-20" end="2000-02-22" />
(...)
<edge id="1534" source="mosquito" target="jellyfish" weight="0.9994175606336606" start="2000-02-20" end="2000-02-22" />
<edge id="1535" source="ant" target="star" weight="0.9994226236705537" start="2000-02-20" end="2000-02-22" />
</edges>
</graph>
</gexf>
Unfortunately I was not able to find any documentation (neither for networkx nor for pygexf) on how to write a dyamic gexf file and add a startand end attribute to every (already existing) node and edge. Can anyone please help me with this?
UPDATE:
When I use
nx.set_edge_attributes(G, 'start', '2000-02-20')
nx.set_edge_attributes(G, 'end', '2000-02-22')
To set the edge attributes, I get the correct output, e.g.:
<edge id="0" source="great" target="wait" weight="0.998675772419067" start="2000-02-20" end="2000-02-22" />
However, when I do:
nx.set_node_attributes(G, 'start','2000-02-20')
nx.set_node_attributes(G, 'end','2000-02-22')
I get:
<node id="blue" label="blue">
<attvalues>
<attvalue for="0" value="2000-02-20" />
<attvalue for="1" value="2000-02-22" />
</attvalues>
How can I set the start and endattribute within the node tag?

Came across that same problem. Networkx 2.1 still does not support that, but there is a workaround:
Write the .gexf file as usual
Download Gephi 0.9.2 and open the .gexf file
Go to Data Laboratory and press 'Merge Columns'. Now select the start and end column and 'Merge Strategy': 'Create time interval'. Now your Interval column is filled with <[start, end]>
Go to File > Export > Graph file... and select File Format:GEXF Files. Your nodes now contain the start and end attribute.

Related

XLSX XML cell formatting works in LibreOffice but not MS Excel

I modified data tables xlsx export to generate tables with my custom styles. Primarily for the background colors. Mine is a mess, but it works. It generates the xlsx file and in LibreOffice it looks exactly like it should. But in Excel, the cells with Style #3 (FFAAAA) are not filled with solid yellow background but with a dotted gray background.
The ones with red or white background just work fine everywhere.
The whole xml was reverse engineered from other exports.
Any idea what Excel expects to be different?
<?xml version="1.0" encoding="UTF-8"?>
<styleSheet xmlns="http://schemas.openxmlformats.org/spreadsheetml/2006/main" xmlns:mc="http://schemas.openxmlformats.org/markup-compatibility/2006" mc:Ignorable="x14ac" xmlns:x14ac="http://schemas.microsoft.com/office/spreadsheetml/2009/9/ac">
<numFmts count="7">
<numFmt numFmtId="0" formatCode=""/>
<numFmt numFmtId="1" formatCode="#,##0.00_-\ [$$-45C]"/>
<numFmt numFmtId="2" formatCode=""£"#,##0.00"/>
<numFmt numFmtId="3" formatCode="[$€-2]\ #,##0.00"/>
<numFmt numFmtId="4" formatCode="0.0%"/>
<numFmt numFmtId="5" formatCode="#,##0;(#,##0)"/>
<numFmt numFmtId="6" formatCode="#,##0.00;(#,##0.00)"/>
</numFmts>
<fonts count="2" x14ac:knownFonts="1">
<font>
<sz val="11" />
<name val="undefined" />
<color rgb="FF000000" />
</font>
<font>
<sz val="11" />
<name val="Calibri" />
<color rgb="FF000000" />
<b />
</font>
</fonts>
<fills count="4">
<fill>
<patternFill patternType="none" />
</fill>
<fill>
<patternFill patternType="solid">
<fgColor rgb="FFffeeaa" />
<bgColor indexed="64" />
</patternFill>
</fill>
<fill>
<patternFill patternType="solid">
<fgColor rgb="FFffaaaa" />
<bgColor indexed="65" />
</patternFill>
</fill>
<fill>
<patternFill patternType="solid">
<fgColor rgb="FFffffff" />
<bgColor indexed="66" />
</patternFill>
</fill>
</fills>
<borders count="2">
<border> <left /> <right /> <top /> <bottom /> <diagonal /> </border>
<border diagonalUp="false" diagonalDown="false"> <left style="thin"> <color auto="1" /> </left> <right style="thin"> <color auto="1" /> </right> <top style="thin"> <color auto="1" /> </top> <bottom style="thin"> <color auto="1" /> </bottom> <diagonal /> </border>
</borders>
<cellStyleXfs count="1">
<xf numFmtId="0" fontId="0" fillId="0" borderId="0" />
</cellStyleXfs>
<cellXfs count="5">
<xf numFmtId="0" fontId="0" fillId="0" borderId="0" applyFont="1" applyFill="1" applyBorder="1"/>
<xf numFmtId="0" fontId="1" fillId="0" borderId="1" applyFont="1" applyFill="1" applyBorder="1"/>
<xf numFmtId="0" fontId="1" fillId="1" borderId="1" applyFont="1" applyFill="1" applyBorder="1"/>
<xf numFmtId="0" fontId="1" fillId="2" borderId="1" applyFont="1" applyFill="1" applyBorder="1"/>
<xf numFmtId="0" fontId="1" fillId="3" borderId="1" applyFont="1" applyFill="1" applyBorder="1"/>
</cellXfs>
<cellStyles count="1">
<cellStyle name="Normal" xfId="0" builtinId="0" />
</cellStyles>
<dxfs count="0" />
<tableStyles count="0" defaultTableStyle="TableStyleMedium9" defaultPivotStyle="PivotStyleMedium4" />
</styleSheet>
It seems excel always overwrites the second with patternType="gray125".
I just keep
<fill>
<patternFill patternType="gray125">
<fgColor rgb="FFffffff" />
<bgColor rgb="FFffffff" />
</patternFill>
</fill>
as second , regardless if i actually use it in any style and add the i need after this. Now it works in Libre Office Calc and MS Excel.
I hope that helps others aswell.

How to group properly excel data source with rowspan?

From my understanding, <groupExpression> tag will be the one that decides whether a new group will be created or not, if there's a change to the element inside <groupExpression>, a new group will be created.
I want my report to look similar to my Excel data source (refer below) hence I want to group the ID and Name in the Excel file. In my jasperReport.jrxml (refer below), my <groupExpression> for Group1 is the ID column of my Excel File. But when I preview the report (refer below), the ID and Name column is not grouped, instead, there's a null string.
How to properly group them and eliminate the null string?
Excel datasource:
jasperReport.jrxml
<?xml version="1.0" encoding="UTF-8"?>
<!-- Created with Jaspersoft Studio version 6.2.0.final using JasperReports Library version 6.2.0 -->
<!-- 2016-01-26T15:33:41 -->
<jasperReport xmlns="http://jasperreports.sourceforge.net/jasperreports" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://jasperreports.sourceforge.net/jasperreports http://jasperreports.sourceforge.net/xsd/jasperreport.xsd" name="FirstJasperReport" pageWidth="595" pageHeight="842" columnWidth="555" leftMargin="20" rightMargin="20" topMargin="20" bottomMargin="20" uuid="8b8832df-588e-4202-826e-a6b3efcbd22b">
<property name="com.jaspersoft.studio.data.defaultdataadapter" value="ExcelDataBase"/>
<queryString>
<![CDATA[]]>
</queryString>
<field name="ID" class="java.lang.Integer"/>
<field name="Name" class="java.lang.String"/>
<field name="Title" class="java.lang.String"/>
<field name="Balance" class="java.lang.Integer"/>
<variable name="Balance1" class="java.lang.Integer" resetType="Group" resetGroup="Group1" calculation="Count">
<variableExpression><![CDATA[$F{Balance}]]></variableExpression>
</variable>
<variable name="Balance2" class="java.lang.Integer" resetType="Group" resetGroup="Group1" calculation="Sum">
<variableExpression><![CDATA[$F{Balance}]]></variableExpression>
</variable>
<group name="Group1">
<groupExpression><![CDATA[$F{ID}]]></groupExpression>
<groupHeader>
<band height="30">
<rectangle>
<reportElement x="0" y="0" width="400" height="30" backcolor="#DEFCF2" uuid="de6c2f8d-afa6-45b4-b40e-574f2e07057e"/>
</rectangle>
<textField>
<reportElement x="0" y="0" width="100" height="30" uuid="c028645d-9b29-42d3-b91e-d47f15a5b44a"/>
<textFieldExpression><![CDATA[$F{ID}]]></textFieldExpression>
</textField>
<textField>
<reportElement x="100" y="0" width="100" height="30" uuid="85d2844f-ef91-47a1-9223-c6943a25fe4d"/>
<textFieldExpression><![CDATA[$F{Name}]]></textFieldExpression>
</textField>
</band>
</groupHeader>
......
Preview result:
How to make title1 and title2 appear under the group test1, without the null string (similar to the Excel source file)?
The problem is that the excel datasource is passing $F{ID}==null for second record. This generates the null group (as you can see also the name is null).
The easiest way to fix it is to not use rowspan in excel (include all data in the excel sheet).
If this is not possible you need to save the first $F{ID} value and return this if $F{ID}==null
Example
<variable name="First_ID" class="java.lang.Integer" resetType="Group" resetGroup="Group1" calculation="First">
<variableExpression><![CDATA[$F{ID}]]></variableExpression>
</variable>
In group return variable $V{First_ID} if $F{ID}==null
<group name="Group1">
<groupExpression><![CDATA[$F{ID}==null?$V{First_ID}:$F{ID}]]></groupExpression>
... your groupHeader ....
</group>

How is the fetchXML Date Operator resolved by the system

CRM 2013-OnPremise
Hello,
I have written a basic View for projects with a start date in the next seven days that is defined by this fetchXML:
<fetch version="1.0" output-format="xml-platform" mapping="logical" distinct="false" >
<entity name="xxxx_project" >
<attribute name="xxxx_startdate" />
<attribute name="xxxx_accountid" />
<attribute name="xxxx_produom" />
<order attribute="xxxx_name" descending="false" />
<filter type="and" >
<filter type="and" >
<condition attribute="statecode" operator="eq" value="0" />
<condition attribute="xxxx_projectstatus" operator="eq" value="331420009" />
<condition attribute="xxxx_materialsshipdate" operator="null" />
<condition attribute="xxxx_startdate" operator="next-x-days" value="7" />
</filter>
</filter>
<attribute name="xxxx_projectid" />
</entity>
</fetch>
Now I was expecting the fetchXML to have the system date injected into it or at least a place holder such as:
<condition value='2012-03-08T15:10:00Z' />
Perhaps this value is added at runtime and is not part of the fetchTemplate? So Msoft does some runtime changes to something like this?
<condition attribute="xxxx_startdate" operator="next-7-days" value="2014-04-23" />
This article says it is injected http://social.microsoft.com/Forums/en-US/c5083689-65fb-474f-a7bc-2eff393016fe/datetime-on-or-after-of-fetchxml-questions?forum=crmdevelopment
But does not give me any idea of what that should look like.
The reason I ask is that I want to use this basic fetchXML as a template but inject a date of my choosing.
Any idea?
If you want to build dynamically the fetchXML simulating a next 7 days condition based on your date, you can always rewrite it using On or Before and On or After conditions.
For example
<condition attribute="xxxx_startdate" operator="on-or-after" value="2014-04-23" />
<condition attribute="xxxx_startdate" operator="on-or-before" value=2014-04-30" />

FetchXML View to Include Attributes from Nested Link-Entity

I would like to have a view that show attributes from 3 entities:
Statistics has a lookup to Account and Account has a lookup to Address.
The view is on Statistics and I want attributes from all 3 entities; is this even possible?
The problem is with the GridXML.
I want to include the attribute wl_city in the GridXML.
This is the FetchXML with link-entities:
<fetchxml>
<fetch version="1.0" output-format="xml-platform" mapping="logical">
<entity name="sb_statistics">
<order attribute="sb_amount" descending="false" />
<!-- It is easy to get these into the GridXML -->
<attribute name="sb_debtor" />
<attribute name="sb_date" />
<attribute name="sb_amount" />
<link-entity name="account" from="accountid" to="sb_debtor"
alias="relatedAccount" link-type="outer">
<!-- It is possible to get this into the GridXML
by using the link-entity alias: relatedAccount.wl_towncity -->
<attribute name="wl_towncity" />
<link-entity name="wl_postalcode" from="wl_postalcodeid"
to="wl_postaltowncity" alias="relatedAddress" link-type="outer">
<!-- I have trouble getting this attribute into the GridXML -->
<attribute name="wl_city" />
</link-entity>
</link-entity>
<attribute name="sb_statisticsid" />
</entity>
</fetch>
</fetchxml>
When I change the GridXML as below this error is displayed when the view is opened:
"To use this saved query, you must remove criteria and columns that refer to deleted or non-searchable items"
<layoutxml>
<grid name="resultset" object="10008" jump="sb_name" select="1" preview="1"
icon="1">
<row name="result" id="sb_statisticsid" multiobjectidfield="1">
<cell name="sb_amount" width="100" />
<cell name="sb_date" width="100" />
<cell name="sb_debtor" width="100" />
<cell name="relatedAccount.relatedAddress.wl_city" width="100" />
</row>
</grid>
</layoutxml>
The below GridXML shows this error when the view is opened:
"Unexpected Error An error has occured".
<layoutxml>
<grid name="resultset" object="10008" jump="sb_name" select="1" preview="1"
icon="1">
<row name="result" id="sb_statisticsid" multiobjectidfield="1">
<cell name="sb_amount" width="100" />
<cell name="sb_date" width="100" />
<cell name="sb_debtor" width="100" />
<cell name="relatedAddress.wl_city" width="100" />
</row>
</grid>
</layoutxml>
The GridXML below results in this error being shown when the view is opened:
"To use this saved view, you must remove criteria and columns that refer to deleted or non-searchable columns".
<layoutxml>
<grid name="resultset" object="10008" jump="sb_name" select="1" preview="1"
icon="1">
<row name="result" id="sb_statisticsid" multiobjectidfield="1">
<cell name="sb_amount" width="100" />
<cell name="sb_date" width="100" />
<cell name="sb_debtor" width="100" />
<cell name="wl_city" width="100" />
</row>
</grid>
</layoutxml>
This saved query works, but it only includes attributes from the primary entity and the first link-entity.
<savedquery>
<IsCustomizable>1</IsCustomizable>
<CanBeDeleted>0</CanBeDeleted>
<isquickfindquery>0</isquickfindquery>
<isprivate>0</isprivate>
<isdefault>0</isdefault>
<returnedtypecode>10008</returnedtypecode>
<savedqueryid>{df101ac4-2e4d-e311-9377-005056bd0001}</savedqueryid>
<layoutxml>
<grid name="resultset" object="10008" jump="sb_name" select="1" preview="1"
icon="1">
<row name="result" id="sb_statisticsid" multiobjectidfield="1">
<cell name="sb_amount" width="100" />
<cell name="sb_date" width="100" />
<cell name="sb_debtor" width="100" />
<cell name="relatedAccount.wl_city" width="100" />
</row>
</grid>
</layoutxml>
<querytype>0</querytype>
<fetchxml>
<fetch version="1.0" output-format="xml-platform" mapping="logical">
<entity name="sb_statistics">
<order attribute="sb_amount" descending="false" />
<attribute name="sb_debtor" />
<attribute name="sb_date" />
<attribute name="sb_amount" />
<link-entity name="account" from="accountid" to="sb_debtor"
alias="relatedAccount" link-type="outer">
<attribute name="wl_towncity" />
<link-entity name="wl_postalcode" from="wl_postalcodeid"
to="wl_postaltowncity" alias="relatedAddress" link-type="outer">
<attribute name="wl_city" />
</link-entity>
</link-entity>
<attribute name="sb_statisticsid" />
</entity>
</fetch>
</fetchxml>
<LocalizedNames>
<LocalizedName description="Statistics and Address" languagecode="1033" />
</LocalizedNames>
</savedquery>
Is GridXML limited to showing only attributes from the primary entity and the first link-entity?
This is not possible, according to the best of my knowledge, but please someone prove me wrong.
A limitation of GridXML appears to be that attributes can only be included that are from the first link-entity, not any nested link-entities.
It should work when using link-type="inner" for nested link.
<entity name="sb_statistics">
...
<link-entity name="account" from="accountid" to="sb_debtor"
alias="relatedAccount" link-type="outer">
<attribute name="wl_towncity" />
<link-entity name="wl_postalcode" from="wl_postalcodeid"
to="wl_postaltowncity" alias="relatedAddress" link-type="inner"> //link-type="inner"
<attribute name="wl_city" />
</link-entity>
</link-entity>
<attribute name="sb_statisticsid" />
</entity>
I have found no evidence that it can be done. With or without link-type='inner' the designer (in 2013) says, "The relatedAddress.wl_city column is no longer a valid column because it has been deleted as a column option. You need to remove this column and, if you want, add a different one."
It does NOT need multiple dereferrences, nor does that work. If you dump the keyValuePairs of the AttributeCollection returned by the fetch, you will see the key is relatedAddress.w1_city -- not its parent nor the combination.
Like the UI, it just appears the layout is limited to only root and children, no grandchildren nor further descendants.
I think it's a little late to answer this question, but maybe someone come to this post and find it helpful.
first thing you should know is that, fetchxml will return only column that are not null, so if you are querying a column that there is no data in that, then fetchxml automatically remove it from result set.
second thing is, if you have different table with different relationship, then alias name will be added to the column name, so in your case relatedAccount.wl_towncity and relatedAddress.wl_city is correct and not relatedAccount.relatedAddress.wl_city. in your example, you put alias name after each other that is not correct.
third thing that you should know is that when a nested result will return, the type is object, but original type AliasedValue , so first you have to cast the object to AliasedValue. then it become ready to cast it to OptionSetValue. after that you have to look for .Value that has the result of what you want
I made it work like this: I still have an issue with unresolved columnheaders.
<fetch distinct='true'>
<entity name='rdiac_riskobject'>
<attribute name='rdiac_riskobjectid' />
<attribute name='rdiac_name' />
<attribute name='rdiac_riskobjectproduct' />
<link-entity name='rdiac_riskobject_rdiac_propertydetail' from='rdiac_riskobjectid' to='rdiac_riskobjectid' intersect='true'>
<link-entity name='rdiac_propertydetail' alias='pd1' from='rdiac_propertydetailid' to='rdiac_propertydetailid'>
<attribute name='rdiac_valuestring' />
<link-entity name='rdiac_propertysvconfig' from='rdiac_property' to='rdiac_propertyid'>
<filter>
<condition attribute='rdiac_svfield' operator='eq' value='100000000'/>
</filter>
</link-entity>
</link-entity>
</link-entity>
<link-entity name='rdiac_riskobject_rdiac_propertydetail' from='rdiac_riskobjectid' to='rdiac_riskobjectid' intersect='true'>
<link-entity name='rdiac_propertydetail' alias='pd2' from='rdiac_propertydetailid' to='rdiac_propertydetailid'>
<attribute name='rdiac_valuestring' />
<link-entity name='rdiac_propertysvconfig' from='rdiac_property' to='rdiac_propertyid'>
<filter>
<condition attribute='rdiac_svfield' operator='eq' value='100000001'/>
</filter>
</link-entity>
</link-entity>
</link-entity>
</entity>
</fetch>
<grid name='resultset' object='10139' jump='rdiac_riskobjectproduct' select='1' preview='0' icon='1' >
<row name='result' id='rdiac_riskobjectid' >
<cell name='rdiac_riskobjectproduct' width='100' />
<cell name='pd1.rdiac_valuestring' width='200' />
<cell name='pd2.rdiac_valuestring' width='200' />
</row>
</grid>

how to fill color in sld with the feature's attribute

for example:
here is a grass feature like this:
id,area, level
1,geometry, 24
2,geometry, 56
...
i wount to write a sld file that display color according to the attribute level, like this :
<?xml version="1.0" encoding="UTF-8"?>
<StyledLayerDescriptor version="1.0.0" xmlns="http://www.opengis.net/sld" xmlns:ogc="http://www.opengis.net/ogc"
xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
xsi:schemaLocation="http://www.opengis.net/sld http://schemas.opengis.net/sld/1.0.0/StyledLayerDescriptor.xsd">
<NamedLayer>
<Name>grass</Name>
<UserStyle>
<Name>grass</Name>
<Title>grass polygon</Title>
<Abstract>grass fill with level</Abstract>
<FeatureTypeStyle>
<Rule>
<PolygonSymbolizer>
<Fill>
<CssParameter name="fill">rgb(**level**, 0, 255)</CssParameter>
</Fill>
<Stroke />
</PolygonSymbolizer>
</Rule>
</FeatureTypeStyle>
</UserStyle>
</NamedLayer>
</StyledLayerDescriptor>
Have a look at the categorize and interpolate functions:
http://docs.geoserver.org/latest/en/user/styling/sld-tipstricks/transformation-func.html

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