I am trying to setup a develop environment for a Spark Streaming project which requires write data into Hive.
I have a cluster with 1 master, 2 slaves and 1 develop machine (coding in Intellij Idea 14).
Within the spark shell, everything seems working fine and I am able to store data into default database in Hive via Spark 1.5 using DataFrame.write.insertInto("testtable")
However when creating a scala project in IDEA and run it using same cluster with same setting, Error was thrown when creating transactional connection factory in the metastore database which suppose to be "metastore_db" in mysql.
Here's the hive-site.xml:
<configuration>
<property>
<name>hive.metastore.uris</name>
<value>thrift://10.1.50.73:9083</value>
</property>
<property>
<name>hive.metastore.warehouse.dir</name>
<value>/user/hive/warehouse</value>
</property>
<property>
<name>javax.jdo.option.ConnectionURL</name>
<value>jdbc:mysql://10.1.50.73:3306/metastore_db?createDatabaseIfNotExist=true</value>
</property>
<property>
<name>javax.jdo.option.ConnectionDriverName</name>
<value>com.mysql.jdbc.Driver</value>
</property>
<property>
<name>javax.jdo.option.ConnectionUserName</name>
<value>sa</value>
</property>
<property>
<name>javax.jdo.option.ConnectionPassword</name>
<value>huanhuan</value>
</property>
</configuration>
the machine which I was running IDEA, can remotely login Mysql and Hive to create tables, so there should have no problem with permissions.
Here's the log4j Output:
> /home/stdevelop/jdk1.7.0_79/bin/java -Didea.launcher.port=7536 -Didea.launcher.bin.path=/home/stdevelop/idea/bin -Dfile.encoding=UTF-8 -classpath /home/stdevelop/jdk1.7.0_79/jre/lib/plugin.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/deploy.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/jfxrt.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/charsets.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/javaws.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/jfr.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/jce.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/jsse.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/rt.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/resources.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/management-agent.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/ext/zipfs.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/ext/sunec.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/ext/sunpkcs11.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/ext/sunjce_provider.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/ext/localedata.jar:/home/stdevelop/jdk1.7.0_79/jre/lib/ext/dnsns.jar:/home/stdevelop/IdeaProjects/StreamingIntoHive/target/scala-2.10/classes:/root/.sbt/boot/scala-2.10.4/lib/scala-library.jar:/home/stdevelop/SparkDll/spark-assembly-1.5.0-hadoop2.5.2.jar:/home/stdevelop/SparkDll/datanucleus-api-jdo-3.2.6.jar:/home/stdevelop/SparkDll/datanucleus-core-3.2.10.jar:/home/stdevelop/SparkDll/datanucleus-rdbms-3.2.9.jar:/home/stdevelop/SparkDll/mysql-connector-java-5.1.35-bin.jar:/home/stdevelop/idea/lib/idea_rt.jar com.intellij.rt.execution.application.AppMain StreamingIntoHive 10.1.50.68 8080
Using Spark's default log4j profile: org/apache/spark/log4j-defaults.properties
15/09/22 19:43:18 INFO SparkContext: Running Spark version 1.5.0
15/09/22 19:43:21 WARN NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
15/09/22 19:43:22 INFO SecurityManager: Changing view acls to: root
15/09/22 19:43:22 INFO SecurityManager: Changing modify acls to: root
15/09/22 19:43:22 INFO SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(root); users with modify permissions: Set(root)
15/09/22 19:43:26 INFO Slf4jLogger: Slf4jLogger started
15/09/22 19:43:26 INFO Remoting: Starting remoting
15/09/22 19:43:26 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriver#10.1.50.68:58070]
15/09/22 19:43:26 INFO Utils: Successfully started service 'sparkDriver' on port 58070.
15/09/22 19:43:26 INFO SparkEnv: Registering MapOutputTracker
15/09/22 19:43:26 INFO SparkEnv: Registering BlockManagerMaster
15/09/22 19:43:26 INFO DiskBlockManager: Created local directory at /tmp/blockmgr-e7fdc896-ebd2-4faa-a9fe-e61bd93a9db4
15/09/22 19:43:26 INFO MemoryStore: MemoryStore started with capacity 797.6 MB
15/09/22 19:43:27 INFO HttpFileServer: HTTP File server directory is /tmp/spark-fb07a3ad-8077-49a8-bcaf-12254cc90282/httpd-0bb434c9-1418-49b6-a514-90e27cb80ab1
15/09/22 19:43:27 INFO HttpServer: Starting HTTP Server
15/09/22 19:43:27 INFO Utils: Successfully started service 'HTTP file server' on port 38865.
15/09/22 19:43:27 INFO SparkEnv: Registering OutputCommitCoordinator
15/09/22 19:43:29 INFO Utils: Successfully started service 'SparkUI' on port 4040.
15/09/22 19:43:29 INFO SparkUI: Started SparkUI at http://10.1.50.68:4040
15/09/22 19:43:29 INFO SparkContext: Added JAR /home/stdevelop/SparkDll/mysql-connector-java-5.1.35-bin.jar at http://10.1.50.68:38865/jars/mysql-connector-java-5.1.35-bin.jar with timestamp 1442922209496
15/09/22 19:43:29 INFO SparkContext: Added JAR /home/stdevelop/SparkDll/datanucleus-api-jdo-3.2.6.jar at http://10.1.50.68:38865/jars/datanucleus-api-jdo-3.2.6.jar with timestamp 1442922209498
15/09/22 19:43:29 INFO SparkContext: Added JAR /home/stdevelop/SparkDll/datanucleus-rdbms-3.2.9.jar at http://10.1.50.68:38865/jars/datanucleus-rdbms-3.2.9.jar with timestamp 1442922209534
15/09/22 19:43:29 INFO SparkContext: Added JAR /home/stdevelop/SparkDll/datanucleus-core-3.2.10.jar at http://10.1.50.68:38865/jars/datanucleus-core-3.2.10.jar with timestamp 1442922209564
15/09/22 19:43:30 WARN MetricsSystem: Using default name DAGScheduler for source because spark.app.id is not set.
15/09/22 19:43:30 INFO AppClient$ClientEndpoint: Connecting to master spark://10.1.50.71:7077...
15/09/22 19:43:32 INFO SparkDeploySchedulerBackend: Connected to Spark cluster with app ID app-20150922062654-0004
15/09/22 19:43:32 INFO AppClient$ClientEndpoint: Executor added: app-20150922062654-0004/0 on worker-20150921191458-10.1.50.71-44716 (10.1.50.71:44716) with 1 cores
15/09/22 19:43:32 INFO SparkDeploySchedulerBackend: Granted executor ID app-20150922062654-0004/0 on hostPort 10.1.50.71:44716 with 1 cores, 1024.0 MB RAM
15/09/22 19:43:32 INFO AppClient$ClientEndpoint: Executor added: app-20150922062654-0004/1 on worker-20150921191456-10.1.50.73-36446 (10.1.50.73:36446) with 1 cores
15/09/22 19:43:32 INFO SparkDeploySchedulerBackend: Granted executor ID app-20150922062654-0004/1 on hostPort 10.1.50.73:36446 with 1 cores, 1024.0 MB RAM
15/09/22 19:43:32 INFO AppClient$ClientEndpoint: Executor added: app-20150922062654-0004/2 on worker-20150921191456-10.1.50.72-53999 (10.1.50.72:53999) with 1 cores
15/09/22 19:43:32 INFO SparkDeploySchedulerBackend: Granted executor ID app-20150922062654-0004/2 on hostPort 10.1.50.72:53999 with 1 cores, 1024.0 MB RAM
15/09/22 19:43:32 INFO AppClient$ClientEndpoint: Executor updated: app-20150922062654-0004/1 is now LOADING
15/09/22 19:43:32 INFO AppClient$ClientEndpoint: Executor updated: app-20150922062654-0004/0 is now LOADING
15/09/22 19:43:32 INFO AppClient$ClientEndpoint: Executor updated: app-20150922062654-0004/2 is now LOADING
15/09/22 19:43:32 INFO AppClient$ClientEndpoint: Executor updated: app-20150922062654-0004/0 is now RUNNING
15/09/22 19:43:32 INFO AppClient$ClientEndpoint: Executor updated: app-20150922062654-0004/1 is now RUNNING
15/09/22 19:43:32 INFO AppClient$ClientEndpoint: Executor updated: app-20150922062654-0004/2 is now RUNNING
15/09/22 19:43:33 INFO Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 60161.
15/09/22 19:43:33 INFO NettyBlockTransferService: Server created on 60161
15/09/22 19:43:33 INFO BlockManagerMaster: Trying to register BlockManager
15/09/22 19:43:33 INFO BlockManagerMasterEndpoint: Registering block manager 10.1.50.68:60161 with 797.6 MB RAM, BlockManagerId(driver, 10.1.50.68, 60161)
15/09/22 19:43:33 INFO BlockManagerMaster: Registered BlockManager
15/09/22 19:43:34 INFO SparkDeploySchedulerBackend: SchedulerBackend is ready for scheduling beginning after reached minRegisteredResourcesRatio: 0.0
15/09/22 19:43:35 INFO SparkContext: Added JAR /home/stdevelop/Builds/streamingintohive.jar at http://10.1.50.68:38865/jars/streamingintohive.jar with timestamp 1442922215169
15/09/22 19:43:39 INFO SparkDeploySchedulerBackend: Registered executor: AkkaRpcEndpointRef(Actor[akka.tcp://sparkExecutor#10.1.50.72:40110/user/Executor#-132020084]) with ID 2
15/09/22 19:43:39 INFO SparkDeploySchedulerBackend: Registered executor: AkkaRpcEndpointRef(Actor[akka.tcp://sparkExecutor#10.1.50.71:38248/user/Executor#-1615730727]) with ID 0
15/09/22 19:43:40 INFO BlockManagerMasterEndpoint: Registering block manager 10.1.50.72:37819 with 534.5 MB RAM, BlockManagerId(2, 10.1.50.72, 37819)
15/09/22 19:43:40 INFO BlockManagerMasterEndpoint: Registering block manager 10.1.50.71:48028 with 534.5 MB RAM, BlockManagerId(0, 10.1.50.71, 48028)
15/09/22 19:43:42 INFO HiveContext: Initializing execution hive, version 1.2.1
15/09/22 19:43:42 INFO ClientWrapper: Inspected Hadoop version: 2.5.2
15/09/22 19:43:42 INFO ClientWrapper: Loaded org.apache.hadoop.hive.shims.Hadoop23Shims for Hadoop version 2.5.2
15/09/22 19:43:42 INFO SparkDeploySchedulerBackend: Registered executor: AkkaRpcEndpointRef(Actor[akka.tcp://sparkExecutor#10.1.50.73:56385/user/Executor#1871695565]) with ID 1
15/09/22 19:43:43 INFO BlockManagerMasterEndpoint: Registering block manager 10.1.50.73:43643 with 534.5 MB RAM, BlockManagerId(1, 10.1.50.73, 43643)
15/09/22 19:43:45 INFO HiveMetaStore: 0: Opening raw store with implemenation class:org.apache.hadoop.hive.metastore.ObjectStore
15/09/22 19:43:45 INFO ObjectStore: ObjectStore, initialize called
15/09/22 19:43:47 INFO Persistence: Property datanucleus.cache.level2 unknown - will be ignored
15/09/22 19:43:47 INFO Persistence: Property hive.metastore.integral.jdo.pushdown unknown - will be ignored
15/09/22 19:43:47 WARN Connection: BoneCP specified but not present in CLASSPATH (or one of dependencies)
15/09/22 19:43:48 WARN Connection: BoneCP specified but not present in CLASSPATH (or one of dependencies)
15/09/22 19:43:58 INFO ObjectStore: Setting MetaStore object pin classes with hive.metastore.cache.pinobjtypes="Table,StorageDescriptor,SerDeInfo,Partition,Database,Type,FieldSchema,Order"
15/09/22 19:44:03 INFO Datastore: The class "org.apache.hadoop.hive.metastore.model.MFieldSchema" is tagged as "embedded-only" so does not have its own datastore table.
15/09/22 19:44:03 INFO Datastore: The class "org.apache.hadoop.hive.metastore.model.MOrder" is tagged as "embedded-only" so does not have its own datastore table.
15/09/22 19:44:10 INFO Datastore: The class "org.apache.hadoop.hive.metastore.model.MFieldSchema" is tagged as "embedded-only" so does not have its own datastore table.
15/09/22 19:44:10 INFO Datastore: The class "org.apache.hadoop.hive.metastore.model.MOrder" is tagged as "embedded-only" so does not have its own datastore table.
15/09/22 19:44:12 INFO MetaStoreDirectSql: Using direct SQL, underlying DB is DERBY
15/09/22 19:44:12 INFO ObjectStore: Initialized ObjectStore
15/09/22 19:44:13 WARN ObjectStore: Version information not found in metastore. hive.metastore.schema.verification is not enabled so recording the schema version 1.2.0
15/09/22 19:44:14 WARN ObjectStore: Failed to get database default, returning NoSuchObjectException
15/09/22 19:44:15 INFO HiveMetaStore: Added admin role in metastore
15/09/22 19:44:15 INFO HiveMetaStore: Added public role in metastore
15/09/22 19:44:16 INFO HiveMetaStore: No user is added in admin role, since config is empty
15/09/22 19:44:16 INFO HiveMetaStore: 0: get_all_databases
15/09/22 19:44:16 INFO audit: ugi=root ip=unknown-ip-addr cmd=get_all_databases
15/09/22 19:44:17 INFO HiveMetaStore: 0: get_functions: db=default pat=*
15/09/22 19:44:17 INFO audit: ugi=root ip=unknown-ip-addr cmd=get_functions: db=default pat=*
15/09/22 19:44:17 INFO Datastore: The class "org.apache.hadoop.hive.metastore.model.MResourceUri" is tagged as "embedded-only" so does not have its own datastore table.
15/09/22 19:44:18 INFO SessionState: Created local directory: /tmp/9ee94679-df51-46bc-bf6f-66b19f053823_resources
15/09/22 19:44:18 INFO SessionState: Created HDFS directory: /tmp/hive/root/9ee94679-df51-46bc-bf6f-66b19f053823
15/09/22 19:44:18 INFO SessionState: Created local directory: /tmp/root/9ee94679-df51-46bc-bf6f-66b19f053823
15/09/22 19:44:18 INFO SessionState: Created HDFS directory: /tmp/hive/root/9ee94679-df51-46bc-bf6f-66b19f053823/_tmp_space.db
15/09/22 19:44:19 INFO HiveContext: default warehouse location is /user/hive/warehouse
15/09/22 19:44:19 INFO HiveContext: Initializing HiveMetastoreConnection version 1.2.1 using Spark classes.
15/09/22 19:44:19 INFO ClientWrapper: Inspected Hadoop version: 2.5.2
15/09/22 19:44:19 INFO ClientWrapper: Loaded org.apache.hadoop.hive.shims.Hadoop23Shims for Hadoop version 2.5.2
15/09/22 19:44:22 WARN NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
15/09/22 19:44:22 INFO HiveMetaStore: 0: Opening raw store with implemenation class:org.apache.hadoop.hive.metastore.ObjectStore
15/09/22 19:44:22 INFO ObjectStore: ObjectStore, initialize called
15/09/22 19:44:23 INFO Persistence: Property datanucleus.cache.level2 unknown - will be ignored
15/09/22 19:44:23 INFO Persistence: Property hive.metastore.integral.jdo.pushdown unknown - will be ignored
15/09/22 19:44:23 WARN Connection: BoneCP specified but not present in CLASSPATH (or one of dependencies)
15/09/22 19:44:25 WARN HiveMetaStore: Retrying creating default database after error: Error creating transactional connection factory
javax.jdo.JDOFatalInternalException: Error creating transactional connection factory
at org.datanucleus.api.jdo.NucleusJDOHelper.getJDOExceptionForNucleusException(NucleusJDOHelper.java:587)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.freezeConfiguration(JDOPersistenceManagerFactory.java:788)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.createPersistenceManagerFactory(JDOPersistenceManagerFactory.java:333)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManagerFactory(JDOPersistenceManagerFactory.java:202)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at javax.jdo.JDOHelper$16.run(JDOHelper.java:1965)
at java.security.AccessController.doPrivileged(Native Method)
at javax.jdo.JDOHelper.invoke(JDOHelper.java:1960)
at javax.jdo.JDOHelper.invokeGetPersistenceManagerFactoryOnImplementation(JDOHelper.java:1166)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:808)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:701)
at org.apache.hadoop.hive.metastore.ObjectStore.getPMF(ObjectStore.java:365)
at org.apache.hadoop.hive.metastore.ObjectStore.getPersistenceManager(ObjectStore.java:394)
at org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:291)
at org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:258)
at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:73)
at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:133)
at org.apache.hadoop.hive.metastore.RawStoreProxy.<init>(RawStoreProxy.java:57)
at org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:66)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:593)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:571)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:620)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.metadata.Hive.getAllDatabases(Hive.java:1234)
at org.apache.hadoop.hive.ql.metadata.Hive.reloadFunctions(Hive.java:174)
at org.apache.hadoop.hive.ql.metadata.Hive.<clinit>(Hive.java:166)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at org.apache.spark.sql.hive.client.ClientWrapper.<init>(ClientWrapper.scala:171)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.liftedTree1$1(IsolatedClientLoader.scala:183)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.<init>(IsolatedClientLoader.scala:179)
at org.apache.spark.sql.hive.HiveContext.metadataHive$lzycompute(HiveContext.scala:227)
at org.apache.spark.sql.hive.HiveContext.metadataHive(HiveContext.scala:186)
at org.apache.spark.sql.hive.HiveContext.setConf(HiveContext.scala:393)
at org.apache.spark.sql.hive.HiveContext.defaultOverrides(HiveContext.scala:175)
at org.apache.spark.sql.hive.HiveContext.<init>(HiveContext.scala:178)
at StreamingIntoHive$.main(StreamingIntoHive.scala:42)
at StreamingIntoHive.main(StreamingIntoHive.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at com.intellij.rt.execution.application.AppMain.main(AppMain.java:140)
NestedThrowablesStackTrace:
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at org.datanucleus.plugin.NonManagedPluginRegistry.createExecutableExtension(NonManagedPluginRegistry.java:631)
at org.datanucleus.plugin.PluginManager.createExecutableExtension(PluginManager.java:325)
at org.datanucleus.store.AbstractStoreManager.registerConnectionFactory(AbstractStoreManager.java:282)
at org.datanucleus.store.AbstractStoreManager.<init>(AbstractStoreManager.java:240)
at org.datanucleus.store.rdbms.RDBMSStoreManager.<init>(RDBMSStoreManager.java:286)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at org.datanucleus.plugin.NonManagedPluginRegistry.createExecutableExtension(NonManagedPluginRegistry.java:631)
at org.datanucleus.plugin.PluginManager.createExecutableExtension(PluginManager.java:301)
at org.datanucleus.NucleusContext.createStoreManagerForProperties(NucleusContext.java:1187)
at org.datanucleus.NucleusContext.initialise(NucleusContext.java:356)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.freezeConfiguration(JDOPersistenceManagerFactory.java:775)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.createPersistenceManagerFactory(JDOPersistenceManagerFactory.java:333)
at org.datanucleus.api.jdo.JDOPersistenceManagerFactory.getPersistenceManagerFactory(JDOPersistenceManagerFactory.java:202)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at javax.jdo.JDOHelper$16.run(JDOHelper.java:1965)
at java.security.AccessController.doPrivileged(Native Method)
at javax.jdo.JDOHelper.invoke(JDOHelper.java:1960)
at javax.jdo.JDOHelper.invokeGetPersistenceManagerFactoryOnImplementation(JDOHelper.java:1166)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:808)
at javax.jdo.JDOHelper.getPersistenceManagerFactory(JDOHelper.java:701)
at org.apache.hadoop.hive.metastore.ObjectStore.getPMF(ObjectStore.java:365)
at org.apache.hadoop.hive.metastore.ObjectStore.getPersistenceManager(ObjectStore.java:394)
at org.apache.hadoop.hive.metastore.ObjectStore.initialize(ObjectStore.java:291)
at org.apache.hadoop.hive.metastore.ObjectStore.setConf(ObjectStore.java:258)
at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:73)
at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:133)
at org.apache.hadoop.hive.metastore.RawStoreProxy.<init>(RawStoreProxy.java:57)
at org.apache.hadoop.hive.metastore.RawStoreProxy.getProxy(RawStoreProxy.java:66)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.newRawStore(HiveMetaStore.java:593)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.getMS(HiveMetaStore.java:571)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.createDefaultDB(HiveMetaStore.java:620)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.init(HiveMetaStore.java:461)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.<init>(RetryingHMSHandler.java:66)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.getProxy(RetryingHMSHandler.java:72)
at org.apache.hadoop.hive.metastore.HiveMetaStore.newRetryingHMSHandler(HiveMetaStore.java:5762)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.<init>(HiveMetaStoreClient.java:199)
at org.apache.hadoop.hive.ql.metadata.SessionHiveMetaStoreClient.<init>(SessionHiveMetaStoreClient.java:74)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at org.apache.hadoop.hive.metastore.MetaStoreUtils.newInstance(MetaStoreUtils.java:1521)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.<init>(RetryingMetaStoreClient.java:86)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:132)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.getProxy(RetryingMetaStoreClient.java:104)
at org.apache.hadoop.hive.ql.metadata.Hive.createMetaStoreClient(Hive.java:3005)
at org.apache.hadoop.hive.ql.metadata.Hive.getMSC(Hive.java:3024)
at org.apache.hadoop.hive.ql.metadata.Hive.getAllDatabases(Hive.java:1234)
at org.apache.hadoop.hive.ql.metadata.Hive.reloadFunctions(Hive.java:174)
at org.apache.hadoop.hive.ql.metadata.Hive.<clinit>(Hive.java:166)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:503)
at org.apache.spark.sql.hive.client.ClientWrapper.<init>(ClientWrapper.scala:171)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.liftedTree1$1(IsolatedClientLoader.scala:183)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.<init>(IsolatedClientLoader.scala:179)
at org.apache.spark.sql.hive.HiveContext.metadataHive$lzycompute(HiveContext.scala:227)
at org.apache.spark.sql.hive.HiveContext.metadataHive(HiveContext.scala:186)
at org.apache.spark.sql.hive.HiveContext.setConf(HiveContext.scala:393)
at org.apache.spark.sql.hive.HiveContext.defaultOverrides(HiveContext.scala:175)
at org.apache.spark.sql.hive.HiveContext.<init>(HiveContext.scala:178)
at StreamingIntoHive$.main(StreamingIntoHive.scala:42)
at StreamingIntoHive.main(StreamingIntoHive.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
at com.intellij.rt.execution.application.AppMain.main(AppMain.java:140)
Caused by: java.lang.OutOfMemoryError: PermGen space
at java.lang.ClassLoader.defineClass1(Native Method)
at java.lang.ClassLoader.defineClass(ClassLoader.java:800)
at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
at java.net.URLClassLoader.defineClass(URLClassLoader.java:449)
at java.net.URLClassLoader.access$100(URLClassLoader.java:71)
at java.net.URLClassLoader$1.run(URLClassLoader.java:361)
at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
at java.security.AccessController.doPrivileged(Native Method)
at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
at java.lang.ClassLoader.loadClass(ClassLoader.java:425)
at org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1.doLoadClass(IsolatedClientLoader.scala:165)
at org.apache.spark.sql.hive.client.IsolatedClientLoader$$anon$1.loadClass(IsolatedClientLoader.scala:153)
at java.lang.ClassLoader.loadClass(ClassLoader.java:358)
at org.datanucleus.store.rdbms.connectionpool.DBCPConnectionPoolFactory.createConnectionPool(DBCPConnectionPoolFactory.java:59)
at org.datanucleus.store.rdbms.ConnectionFactoryImpl.generateDataSources(ConnectionFactoryImpl.java:238)
at org.datanucleus.store.rdbms.ConnectionFactoryImpl.initialiseDataSources(ConnectionFactoryImpl.java:131)
at org.datanucleus.store.rdbms.ConnectionFactoryImpl.<init>(ConnectionFactoryImpl.java:85)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:57)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:526)
at org.datanucleus.plugin.NonManagedPluginRegistry.createExecutableExtension(NonManagedPluginRegistry.java:631)
at org.datanucleus.plugin.PluginManager.createExecutableExtension(PluginManager.java:325)
at org.datanucleus.store.AbstractStoreManager.registerConnectionFactory(AbstractStoreManager.java:282)
at org.datanucleus.store.AbstractStoreManager.<init>(AbstractStoreManager.java:240)
………………
………………
Process finished with exit code 1
===============
Can anyone help me to find out the reason?
Thanks.
I believe adding hiveContext may help, if not added already in code.
import org.apache.spark.sql.hive.HiveContext
import hiveContext.implicits._
import hiveContext.sql
val hiveContext = new HiveContext(sc)
A hive context adds support for finding tables in the MetaStore and writing queries using HiveQL. Users who do not have an existing Hive deployment can still create a HiveContext. When not configured by the hive-site.xml, the context automatically creates metastore_db and warehouse in the current directory. -- From spark example
Issue was resolved by,
Actually I created metastore_db manually so if spark connects mysql, it will pass the direct sql DbType test. However since it didn't pass the mysql direct sql therefore spark used derby as default metastore db as what was shown in the log4j. This implies spark was not connected to metastore_db in mysql although hive-site.xml was correctly configured. I found a solution for this which is described in the question comment. Hope it helps
If you are using Mysql database specify mysql driver path in spark-env.sh file,
SampleCode:
export SPARK_CLASSPATH="/home/${user.name}/work/apache-hive-2.0.0-bin/lib/mysql-connector-java-5.1.38-bin.jar"
export HADOOP_CONF_DIR=$HADOOP_HOME/etc/hadoop
export YARN_CONF_DIR=$HADOOP_HOME/etc/hadoop
export SPARK_LOG_DIR=/home/hadoop/work/spark-2.0.0-bin-hadoop2.7/logs
export SPARK_WORKER_DIR=/home/hadoop/work/spark-2.0.0-bin-hadoop2.7/logs/worker_dir
More info: https://www.youtube.com/watch?v=y3E8tUFhBt0
Related
I'm trying to run spark on kubernetes(using minikube with VirtualBox or docker driver, I tested in both) and now I have an error that I don't know how to solve.
The error is a "SparkException: External scheduler cannot be instantiated". I'm new in Kubernetes world, so I really don't know if this is a newbie error, but trying to resolve by myself I failed.
Please help me.
In the next lines, follow the command and the error.
I use this spark submit command:
spark-submit --master k8s://https://192.168.99.102:8443 \
--deploy-mode cluster \
--name spark-pi \
--class org.apache.spark.examples.SparkPi \
--conf spark.executor.instances=2 \
--executor-memory 1024m \
--conf spark.kubernetes.container.image=spark:latest \
local:///opt/spark/examples/jars/spark-examples_2.12-3.0.0.jar
And i got this error in the pod:
20/06/23 15:24:56 INFO SparkContext: Submitted application: Spark Pi
20/06/23 15:24:56 INFO SecurityManager: Changing view acls to: 185,luan
20/06/23 15:24:56 INFO SecurityManager: Changing modify acls to: 185,luan
20/06/23 15:24:56 INFO SecurityManager: Changing view acls groups to:
20/06/23 15:24:56 INFO SecurityManager: Changing modify acls groups to:
20/06/23 15:24:56 INFO SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(185, luan); groups with view permissions: Set(); users with modify permissions: Set(185, luan); groups with modify permissions: Set()
20/06/23 15:24:57 INFO Utils: Successfully started service 'sparkDriver' on port 7078.
20/06/23 15:24:57 INFO SparkEnv: Registering MapOutputTracker
20/06/23 15:24:57 INFO SparkEnv: Registering BlockManagerMaster
20/06/23 15:24:57 INFO BlockManagerMasterEndpoint: Using org.apache.spark.storage.DefaultTopologyMapper for getting topology information
20/06/23 15:24:57 INFO BlockManagerMasterEndpoint: BlockManagerMasterEndpoint up
20/06/23 15:24:57 INFO SparkEnv: Registering BlockManagerMasterHeartbeat
20/06/23 15:24:57 INFO DiskBlockManager: Created local directory at /var/data/spark-4f7b787b-ec75-4ae5-b703-f9f90ef130cb/blockmgr-1ef6d02a-48f6-4bd7-9d7d-fe2518850f5e
20/06/23 15:24:57 INFO MemoryStore: MemoryStore started with capacity 413.9 MiB
20/06/23 15:24:57 INFO SparkEnv: Registering OutputCommitCoordinator
20/06/23 15:24:57 INFO Utils: Successfully started service 'SparkUI' on port 4040.
20/06/23 15:24:57 INFO SparkUI: Bound SparkUI to 0.0.0.0, and started at http://spark-pi-a8278472e1c83236-driver-svc.default.svc:4040
20/06/23 15:24:57 INFO SparkContext: Added JAR local:///opt/spark/examples/jars/spark-examples_2.12-3.0.0.jar at file:/opt/spark/examples/jars/spark-examples_2.12-3.0.0.jar with timestamp 1592925897650
20/06/23 15:24:57 WARN SparkContext: The jar local:///opt/spark/examples/jars/spark-examples_2.12-3.0.0.jar has been added already. Overwriting of added jars is not supported in the current version.
20/06/23 15:24:57 INFO SparkKubernetesClientFactory: Auto-configuring K8S client using current context from users K8S config file
20/06/23 15:24:58 ERROR SparkContext: Error initializing SparkContext.
org.apache.spark.SparkException: External scheduler cannot be instantiated
at org.apache.spark.SparkContext$.org$apache$spark$SparkContext$$createTaskScheduler(SparkContext.scala:2934)
at org.apache.spark.SparkContext.<init>(SparkContext.scala:528)
at org.apache.spark.SparkContext$.getOrCreate(SparkContext.scala:2555)
at org.apache.spark.sql.SparkSession$Builder.$anonfun$getOrCreate$1(SparkSession.scala:930)
at scala.Option.getOrElse(Option.scala:189)
at org.apache.spark.sql.SparkSession$Builder.getOrCreate(SparkSession.scala:921)
at org.apache.spark.examples.SparkPi$.main(SparkPi.scala:30)
at org.apache.spark.examples.SparkPi.main(SparkPi.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:928)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:180)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:203)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:90)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:1007)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:1016)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: io.fabric8.kubernetes.client.KubernetesClientException: Failure executing: GET at: https://kubernetes.default.svc/api/v1/namespaces/default/pods/spark-pi-a8278472e1c83236-driver. Message: Forbidden!Configured service account doesn't have access. Service account may have been revoked. pods "spark-pi-a8278472e1c83236-driver" is forbidden: User "system:serviceaccount:default:default" cannot get resource "pods" in API group "" in the namespace "default".
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.requestFailure(OperationSupport.java:568)
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.assertResponseCode(OperationSupport.java:505)
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.handleResponse(OperationSupport.java:471)
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.handleResponse(OperationSupport.java:430)
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.handleGet(OperationSupport.java:395)
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.handleGet(OperationSupport.java:376)
at io.fabric8.kubernetes.client.dsl.base.BaseOperation.handleGet(BaseOperation.java:845)
at io.fabric8.kubernetes.client.dsl.base.BaseOperation.getMandatory(BaseOperation.java:214)
at io.fabric8.kubernetes.client.dsl.base.BaseOperation.get(BaseOperation.java:168)
at org.apache.spark.scheduler.cluster.k8s.ExecutorPodsAllocator.$anonfun$driverPod$1(ExecutorPodsAllocator.scala:59)
at scala.Option.map(Option.scala:230)
at org.apache.spark.scheduler.cluster.k8s.ExecutorPodsAllocator.<init>(ExecutorPodsAllocator.scala:58)
at org.apache.spark.scheduler.cluster.k8s.KubernetesClusterManager.createSchedulerBackend(KubernetesClusterManager.scala:113)
at org.apache.spark.SparkContext$.org$apache$spark$SparkContext$$createTaskScheduler(SparkContext.scala:2928)
... 19 more
20/06/23 15:24:58 INFO SparkUI: Stopped Spark web UI at http://spark-pi-a8278472e1c83236-driver-svc.default.svc:4040
20/06/23 15:24:58 INFO MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
20/06/23 15:24:58 INFO MemoryStore: MemoryStore cleared
20/06/23 15:24:58 INFO BlockManager: BlockManager stopped
20/06/23 15:24:58 INFO BlockManagerMaster: BlockManagerMaster stopped
20/06/23 15:24:58 WARN MetricsSystem: Stopping a MetricsSystem that is not running
20/06/23 15:24:58 INFO OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
20/06/23 15:24:58 INFO SparkContext: Successfully stopped SparkContext
Exception in thread "main" org.apache.spark.SparkException: External scheduler cannot be instantiated
at org.apache.spark.SparkContext$.org$apache$spark$SparkContext$$createTaskScheduler(SparkContext.scala:2934)
at org.apache.spark.SparkContext.<init>(SparkContext.scala:528)
at org.apache.spark.SparkContext$.getOrCreate(SparkContext.scala:2555)
at org.apache.spark.sql.SparkSession$Builder.$anonfun$getOrCreate$1(SparkSession.scala:930)
at scala.Option.getOrElse(Option.scala:189)
at org.apache.spark.sql.SparkSession$Builder.getOrCreate(SparkSession.scala:921)
at org.apache.spark.examples.SparkPi$.main(SparkPi.scala:30)
at org.apache.spark.examples.SparkPi.main(SparkPi.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:928)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:180)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:203)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:90)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:1007)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:1016)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: io.fabric8.kubernetes.client.KubernetesClientException: Failure executing: GET at: https://kubernetes.default.svc/api/v1/namespaces/default/pods/spark-pi-a8278472e1c83236-driver. Message: Forbidden!Configured service account doesn't have access. Service account may have been revoked. pods "spark-pi-a8278472e1c83236-driver" is forbidden: User "system:serviceaccount:default:default" cannot get resource "pods" in API group "" in the namespace "default".
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.requestFailure(OperationSupport.java:568)
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.assertResponseCode(OperationSupport.java:505)
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.handleResponse(OperationSupport.java:471)
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.handleResponse(OperationSupport.java:430)
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.handleGet(OperationSupport.java:395)
at io.fabric8.kubernetes.client.dsl.base.OperationSupport.handleGet(OperationSupport.java:376)
at io.fabric8.kubernetes.client.dsl.base.BaseOperation.handleGet(BaseOperation.java:845)
at io.fabric8.kubernetes.client.dsl.base.BaseOperation.getMandatory(BaseOperation.java:214)
at io.fabric8.kubernetes.client.dsl.base.BaseOperation.get(BaseOperation.java:168)
at org.apache.spark.scheduler.cluster.k8s.ExecutorPodsAllocator.$anonfun$driverPod$1(ExecutorPodsAllocator.scala:59)
at scala.Option.map(Option.scala:230)
at org.apache.spark.scheduler.cluster.k8s.ExecutorPodsAllocator.<init>(ExecutorPodsAllocator.scala:58)
at org.apache.spark.scheduler.cluster.k8s.KubernetesClusterManager.createSchedulerBackend(KubernetesClusterManager.scala:113)
at org.apache.spark.SparkContext$.org$apache$spark$SparkContext$$createTaskScheduler(SparkContext.scala:2928)
... 19 more
20/06/23 15:24:58 INFO ShutdownHookManager: Shutdown hook called
20/06/23 15:24:58 INFO ShutdownHookManager: Deleting directory /var/data/spark-4f7b787b-ec75-4ae5-b703-f9f90ef130cb/spark-616edc5e-b42d-4c77-9f11-8465b4d69642
20/06/23 15:24:58 INFO ShutdownHookManager: Deleting directory /tmp/spark-71e3bd59-3b7d-4d72-a442-b0ad0c7092fb
Thank You!
Ps: Im using Spark 3.0 - new version, minikube - 1.11.0
Based on the log file:
Message: Forbidden!Configured service account doesn't have access. Service account may have been revoked. pods "spark-pi-a8278472e1c83236-driver" is forbidden: User "system:serviceaccount:default:default" cannot get resource "pods" in API group "" in the namespace "default".
It looks like the default:default service account doesn't have edit permissions. You can run this to create the ClusterRoleBinding to add the permissions.
$ kubectl create clusterrolebinding default \
--clusterrole=edit --serviceaccount=default:default --namespace=default
You can take a look at this cheat sheet.
I am trying to install Spark on Hadoop-Yarn and I'm getting the error which I believe is due to a configuration error. I have a fully functioning hadoop-yarn installation on Ubuntu. When I execute the spark-submit command or spark-shell command I get the following error. I would like to know whether I have set the IP addresses correctly in the respective files? Currently I'm usung the same IP for both hadoop and Spark. As I want to configure spark to use hdfs and yarn do I need to have seperate IP addresses for SPARK_LOCAL_IP and SPARK_MASTER_IP in spark-env.sh?
ERROR spark.SparkContext: Error initializing SparkContext.
java.net.ConnectException: Call From hadoop-VirtualBox/127.0.1.1 to
hadoop-VirtualBox:9000 failed on connection exception:
java.net.ConnectException: Connection refused;
Following are the versions of software I'm using
Ubuntu: 18.01.1 LTS
Hadoop: 3.0.3
Spark: 2.44
Scala: 2.12.0
Java: 1.8.0
I downloaded a pre-built version of Spark for hadoop from this link. Following is the IP given to hadoop in /etc/hosts.txt
127.0.0.1 localhost
127.0.1.1 hadoop-VirtualBox #hadoop node master
.profile configuration file (I have my environment set up in .profile instead of .bashrc)
export PATH=$PATH:/usr/local/hadoop/bin/:/usr/local/hadoop/sbin/
export CLASSPATH=$CLASSPATH:/usr/local/hadoop/lib/*:.
export JAVA_HOME=/usr/lib/jvm/java-8-openjdk-amd64
export PATH=$JAVA_HOME/bin:$PATH
PATH=/usr/local/Spark/bin:$PATH
export HADOOP_CONF_DIR=/usr/local/hadoop/etc/hadoop
export YARN_CONF_DIR=/usr/local/hadoop/etc/hadoop
export SPARK_HOME=/usr/local/Spark
export LD_LIBRARY_PATH=/usr/local/hadoop/lib/native:$LD_LIBRARY_PATH
export SCALA_HOME=/usr/local/Scala
export PATH=$SCALA_HOME:bin:$PATH
spark-env.sh
export SCALA_HOME=/usr/local/Scala
export JAVA_HOME=/usr/lib/jvm/java-8-openjdk-amd64
export SPARK_WORKER_MEMORY=1g
export SPARK_WORKER_INSTANCES=2
export SPARK_MASTER_IP=127.0.1.1
#export SPARK_MASTER_PORT=9000
export SPARK_WORKER_DIR=/usr/local/Spark/tmp
# Options read in YARN client mode
export HADOOP_CONF_DIR=/usr/local/hadoop/etc/hadoop
export SPARK_CONF_DIR=/usr/local/Spark/conf
export YARN_CONF_DIR=/usr/local/hadoop/etc/hadoop
export SPARK_EXECUTOR_INSTANCES=2
export SPARK_EXECUTOR_CORES=2
export SPARK_EXECUTOR_MEMORY=1G
export SPARK_DRIVER_MEMORY=1G
export SPARK_YARN_APP_NAME=Spark
spark-default.conf
spark.master yarn
spark.eventLog.enabled true
spark.eventLog.dir hdfs://hadoop-VirtualBox:9000/spark-logs
spark.yarn.am.memory 512m
spark.serializer org.apache.spark.serializer.KryoSerializer
spark.yarn.jars hdfs://hadoop-VirtualBox:9000/spark-jars
First I start the hadoop services and then start the spark services as follows:
start-dfs.sh
start-yarn.sh
jps
hdfs dfs -mkdir /spark-logs
hdfs dfs -mkdir /spark-jars
#spark-jars.zip is a zip file of the jars folder in $SPARK_HOME
hdfs dfs -put /usr/local/Spark/spark-jars.zip /spark-jars
cd /usr/local/Spark/sbin
./start-all.sh
spark-submit --class org.apache.spark.examples.JavaSparkPi --master yarn --deploy-mode client /usr/local/Spark/examples/jars/spark-examples_2.11-2.4.4.jar 10
Follwoing is the trace in the terminal.
2019-10-20 11:55:39,512 WARN util.Utils: Your hostname, hadoop-VirtualBox resolves to a loopback address: 127.0.1.1; using 10.0.2.15 instead (on interface enp0s3)
2019-10-20 11:55:39,519 WARN util.Utils: Set SPARK_LOCAL_IP if you need to bind to another address
2019-10-20 11:55:43,942 WARN util.NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
2019-10-20 11:55:47,883 INFO spark.SparkContext: Running Spark version 2.4.4
2019-10-20 11:55:48,135 INFO spark.SparkContext: Submitted application: JavaSparkPi
2019-10-20 11:55:48,858 INFO spark.SecurityManager: Changing view acls to: hadoop
2019-10-20 11:55:48,858 INFO spark.SecurityManager: Changing modify acls to: hadoop
2019-10-20 11:55:48,859 INFO spark.SecurityManager: Changing view acls groups to:
2019-10-20 11:55:48,859 INFO spark.SecurityManager: Changing modify acls groups to:
2019-10-20 11:55:48,859 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(hadoop); groups with view permissions: Set(); users with modify permissions: Set(hadoop); groups with modify permissions: Set()
2019-10-20 11:55:50,722 INFO util.Utils: Successfully started service 'sparkDriver' on port 44765.
2019-10-20 11:55:53,863 INFO spark.SparkEnv: Registering MapOutputTracker
2019-10-20 11:55:54,364 INFO spark.SparkEnv: Registering BlockManagerMaster
2019-10-20 11:55:54,395 INFO storage.BlockManagerMasterEndpoint: Using org.apache.spark.storage.DefaultTopologyMapper for getting topology information
2019-10-20 11:55:54,407 INFO storage.BlockManagerMasterEndpoint: BlockManagerMasterEndpoint up
2019-10-20 11:55:55,024 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-75df7314-58f9-4c97-b827-e66072015afa
2019-10-20 11:55:55,815 INFO memory.MemoryStore: MemoryStore started with capacity 366.3 MB
2019-10-20 11:55:56,962 INFO spark.SparkEnv: Registering OutputCommitCoordinator
2019-10-20 11:55:58,780 INFO util.log: Logging initialized #26940ms
2019-10-20 11:56:00,794 INFO server.Server: jetty-9.3.z-SNAPSHOT, build timestamp: unknown, git hash: unknown
2019-10-20 11:56:01,372 INFO server.Server: Started #29549ms
2019-10-20 11:56:01,754 INFO server.AbstractConnector: Started ServerConnector#6b648010{HTTP/1.1,[http/1.1]}{0.0.0.0:4040}
2019-10-20 11:56:01,772 INFO util.Utils: Successfully started service 'SparkUI' on port 4040.
2019-10-20 11:56:02,378 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#6ac4944a{/jobs,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,422 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#1e34c607{/jobs/json,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,468 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#5215cd9a{/jobs/job,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,528 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#31198ceb{/jobs/job/json,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,596 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#9257031{/stages,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,656 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#75201592{/stages/json,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,672 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#7726e185{/stages/stage,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,721 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#5dda14d0{/stages/stage/json,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,759 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#1db0ec27{/stages/pool,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,815 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#3d9fc57a{/stages/pool/json,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,855 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#d4ab71a{/storage,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,923 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#3b4ef7{/storage/json,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,941 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#1af05b03{/storage/rdd,null,AVAILABLE,#Spark}
2019-10-20 11:56:02,982 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#5987e932{/storage/rdd/json,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,051 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#1ad777f{/environment,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,098 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#5bbbdd4b{/environment/json,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,135 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#438bad7c{/executors,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,160 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#25230246{/executors/json,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,194 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#4fdf8f12{/executors/threadDump,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,234 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#4a8b5227{/executors/threadDump/json,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,479 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#54f5f647{/static,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,503 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#2899a8db{/,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,559 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#1e8823d2{/api,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,602 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#4c432866{/jobs/job/kill,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,657 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#12365c88{/stages/stage/kill,null,AVAILABLE,#Spark}
2019-10-20 11:56:03,776 INFO ui.SparkUI: Bound SparkUI to 0.0.0.0, and started at http://10.0.2.15:4040
2019-10-20 11:56:04,336 INFO spark.SparkContext: Added JAR file:/usr/local/Spark/examples/jars/spark-examples_2.11-2.4.4.jar at spark://10.0.2.15:44765/jars/spark-examples_2.11-2.4.4.jar with timestamp 1571568964292
2019-10-20 11:56:15,228 INFO client.RMProxy: Connecting to ResourceManager at /0.0.0.0:8032
2019-10-20 11:56:19,448 INFO yarn.Client: Requesting a new application from cluster with 1 NodeManagers
2019-10-20 11:56:20,449 INFO yarn.Client: Verifying our application has not requested more than the maximum memory capability of the cluster (8192 MB per container)
2019-10-20 11:56:20,455 INFO yarn.Client: Will allocate AM container, with 896 MB memory including 384 MB overhead
2019-10-20 11:56:20,476 INFO yarn.Client: Setting up container launch context for our AM
2019-10-20 11:56:20,553 INFO yarn.Client: Setting up the launch environment for our AM container
2019-10-20 11:56:20,753 INFO yarn.Client: Preparing resources for our AM container
2019-10-20 11:56:21,859 INFO yarn.Client: Deleted staging directory hdfs://localhost:9000/user/hadoop/.sparkStaging/application_1571568174433_0002
2019-10-20 11:56:21,887 ERROR spark.SparkContext: Error initializing SparkContext.
java.net.ConnectException: Call From hadoop-VirtualBox/127.0.1.1 to hadoop-VirtualBox:9000 failed on connection exception: java.net.ConnectException: Connection refused; For more details see: http://wiki.apache.org/hadoop/ConnectionRefused
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.net.NetUtils.wrapWithMessage(NetUtils.java:792)
at org.apache.hadoop.net.NetUtils.wrapException(NetUtils.java:732)
at org.apache.hadoop.ipc.Client.call(Client.java:1479)
at org.apache.hadoop.ipc.Client.call(Client.java:1412)
at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:229)
at com.sun.proxy.$Proxy12.getFileInfo(Unknown Source)
at org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.getFileInfo(ClientNamenodeProtocolTranslatorPB.java:771)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:191)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:102)
at com.sun.proxy.$Proxy13.getFileInfo(Unknown Source)
at org.apache.hadoop.hdfs.DFSClient.getFileInfo(DFSClient.java:2108)
at org.apache.hadoop.hdfs.DistributedFileSystem$22.doCall(DistributedFileSystem.java:1305)
at org.apache.hadoop.hdfs.DistributedFileSystem$22.doCall(DistributedFileSystem.java:1301)
at org.apache.hadoop.fs.FileSystemLinkResolver.resolve(FileSystemLinkResolver.java:81)
at org.apache.hadoop.hdfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:1317)
at org.apache.hadoop.fs.Globber.getFileStatus(Globber.java:57)
at org.apache.hadoop.fs.Globber.glob(Globber.java:252)
at org.apache.hadoop.fs.FileSystem.globStatus(FileSystem.java:1657)
at org.apache.spark.deploy.yarn.Client$$anonfun$prepareLocalResources$5.apply(Client.scala:528)
at org.apache.spark.deploy.yarn.Client$$anonfun$prepareLocalResources$5.apply(Client.scala:524)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.deploy.yarn.Client.prepareLocalResources(Client.scala:524)
at org.apache.spark.deploy.yarn.Client.createContainerLaunchContext(Client.scala:865)
at org.apache.spark.deploy.yarn.Client.submitApplication(Client.scala:179)
at org.apache.spark.scheduler.cluster.YarnClientSchedulerBackend.start(YarnClientSchedulerBackend.scala:57)
at org.apache.spark.scheduler.TaskSchedulerImpl.start(TaskSchedulerImpl.scala:183)
at org.apache.spark.SparkContext.<init>(SparkContext.scala:501)
at org.apache.spark.SparkContext$.getOrCreate(SparkContext.scala:2520)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$7.apply(SparkSession.scala:935)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$7.apply(SparkSession.scala:926)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession$Builder.getOrCreate(SparkSession.scala:926)
at org.apache.spark.examples.JavaSparkPi.main(JavaSparkPi.java:37)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:845)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:161)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:184)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:86)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:920)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:929)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.net.ConnectException: Connection refused
at sun.nio.ch.SocketChannelImpl.checkConnect(Native Method)
at sun.nio.ch.SocketChannelImpl.finishConnect(SocketChannelImpl.java:717)
at org.apache.hadoop.net.SocketIOWithTimeout.connect(SocketIOWithTimeout.java:206)
at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:531)
at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:495)
at org.apache.hadoop.ipc.Client$Connection.setupConnection(Client.java:614)
at org.apache.hadoop.ipc.Client$Connection.setupIOstreams(Client.java:712)
at org.apache.hadoop.ipc.Client$Connection.access$2900(Client.java:375)
at org.apache.hadoop.ipc.Client.getConnection(Client.java:1528)
at org.apache.hadoop.ipc.Client.call(Client.java:1451)
... 47 more
2019-10-20 11:56:22,320 INFO server.AbstractConnector: Stopped Spark#6b648010{HTTP/1.1,[http/1.1]}{0.0.0.0:4040}
2019-10-20 11:56:22,378 INFO ui.SparkUI: Stopped Spark web UI at http://10.0.2.15:4040
2019-10-20 11:56:22,721 WARN cluster.YarnSchedulerBackend$YarnSchedulerEndpoint: Attempted to request executors before the AM has registered!
2019-10-20 11:56:22,922 INFO cluster.YarnClientSchedulerBackend: Stopped
2019-10-20 11:56:23,156 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
2019-10-20 11:56:23,355 INFO memory.MemoryStore: MemoryStore cleared
2019-10-20 11:56:23,365 INFO storage.BlockManager: BlockManager stopped
2019-10-20 11:56:23,566 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
2019-10-20 11:56:23,569 WARN metrics.MetricsSystem: Stopping a MetricsSystem that is not running
2019-10-20 11:56:23,627 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
2019-10-20 11:56:23,725 INFO spark.SparkContext: Successfully stopped SparkContext
Exception in thread "main" java.net.ConnectException: Call From hadoop-VirtualBox/127.0.1.1 to hadoop-VirtualBox:9000 failed on connection exception: java.net.ConnectException: Connection refused; For more details see: http://wiki.apache.org/hadoop/ConnectionRefused
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.net.NetUtils.wrapWithMessage(NetUtils.java:792)
at org.apache.hadoop.net.NetUtils.wrapException(NetUtils.java:732)
at org.apache.hadoop.ipc.Client.call(Client.java:1479)
at org.apache.hadoop.ipc.Client.call(Client.java:1412)
at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:229)
at com.sun.proxy.$Proxy12.getFileInfo(Unknown Source)
at org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.getFileInfo(ClientNamenodeProtocolTranslatorPB.java:771)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:191)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:102)
at com.sun.proxy.$Proxy13.getFileInfo(Unknown Source)
at org.apache.hadoop.hdfs.DFSClient.getFileInfo(DFSClient.java:2108)
at org.apache.hadoop.hdfs.DistributedFileSystem$22.doCall(DistributedFileSystem.java:1305)
at org.apache.hadoop.hdfs.DistributedFileSystem$22.doCall(DistributedFileSystem.java:1301)
at org.apache.hadoop.fs.FileSystemLinkResolver.resolve(FileSystemLinkResolver.java:81)
at org.apache.hadoop.hdfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:1317)
at org.apache.hadoop.fs.Globber.getFileStatus(Globber.java:57)
at org.apache.hadoop.fs.Globber.glob(Globber.java:252)
at org.apache.hadoop.fs.FileSystem.globStatus(FileSystem.java:1657)
at org.apache.spark.deploy.yarn.Client$$anonfun$prepareLocalResources$5.apply(Client.scala:528)
at org.apache.spark.deploy.yarn.Client$$anonfun$prepareLocalResources$5.apply(Client.scala:524)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.deploy.yarn.Client.prepareLocalResources(Client.scala:524)
at org.apache.spark.deploy.yarn.Client.createContainerLaunchContext(Client.scala:865)
at org.apache.spark.deploy.yarn.Client.submitApplication(Client.scala:179)
at org.apache.spark.scheduler.cluster.YarnClientSchedulerBackend.start(YarnClientSchedulerBackend.scala:57)
at org.apache.spark.scheduler.TaskSchedulerImpl.start(TaskSchedulerImpl.scala:183)
at org.apache.spark.SparkContext.<init>(SparkContext.scala:501)
at org.apache.spark.SparkContext$.getOrCreate(SparkContext.scala:2520)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$7.apply(SparkSession.scala:935)
at org.apache.spark.sql.SparkSession$Builder$$anonfun$7.apply(SparkSession.scala:926)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession$Builder.getOrCreate(SparkSession.scala:926)
at org.apache.spark.examples.JavaSparkPi.main(JavaSparkPi.java:37)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.JavaMainApplication.start(SparkApplication.scala:52)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:845)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:161)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:184)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:86)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:920)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:929)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.net.ConnectException: Connection refused
at sun.nio.ch.SocketChannelImpl.checkConnect(Native Method)
at sun.nio.ch.SocketChannelImpl.finishConnect(SocketChannelImpl.java:717)
at org.apache.hadoop.net.SocketIOWithTimeout.connect(SocketIOWithTimeout.java:206)
at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:531)
at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:495)
at org.apache.hadoop.ipc.Client$Connection.setupConnection(Client.java:614)
at org.apache.hadoop.ipc.Client$Connection.setupIOstreams(Client.java:712)
at org.apache.hadoop.ipc.Client$Connection.access$2900(Client.java:375)
at org.apache.hadoop.ipc.Client.getConnection(Client.java:1528)
at org.apache.hadoop.ipc.Client.call(Client.java:1451)
... 47 more
2019-10-20 11:56:23,899 INFO util.ShutdownHookManager: Shutdown hook called
2019-10-20 11:56:23,913 INFO util.ShutdownHookManager: Deleting directory /tmp/spark-1659f92f-aa82-4f31-9183-f9b95d9375e3
2019-10-20 11:56:23,946 INFO util.ShutdownHookManager: Deleting directory /tmp/spark-f353495e-4f40-48b2-91a3-a3e2caeb3500
You must set your Local IP in Spark-env.sh file.
like: SPARK_LOCAL_IP=""
This question already has answers here:
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(4 answers)
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spark returns error libsnappyjava.so: failed to map segment from shared object: Operation not permitted
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Closed 3 years ago.
I am running CDH 5.16 standalone singlenode in a RHEL 7 Server.
I have written a simple spark code that reads a text file from HDFS and load it as parquet file in a separate location in HDFS. But when ever i am running this code in the server(i am using SBT to build jar and deploy it in cluster using spark-submit), following error is thrown:
19/06/07 12:56:04 INFO spark.SparkContext: Running Spark version 1.6.0
19/06/07 12:56:04 INFO spark.SecurityManager: Changing view acls to: ak_bng
19/06/07 12:56:04 INFO spark.SecurityManager: Changing modify acls to: ak_bng
19/06/07 12:56:04 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(ak_bng); users with modify permissions: Set(ak_bng)
19/06/07 12:56:05 INFO util.Utils: Successfully started service 'sparkDriver' on port 44220.
19/06/07 12:56:05 INFO slf4j.Slf4jLogger: Slf4jLogger started
19/06/07 12:56:05 INFO Remoting: Starting remoting
19/06/07 12:56:05 INFO Remoting: Remoting started; listening on addresses :[akka.tcp://sparkDriverActorSystem#10.188.223.5:36304]
19/06/07 12:56:05 INFO Remoting: Remoting now listens on addresses: [akka.tcp://sparkDriverActorSystem#10.188.223.5:36304]
19/06/07 12:56:05 INFO util.Utils: Successfully started service 'sparkDriverActorSystem' on port 36304.
19/06/07 12:56:05 INFO spark.SparkEnv: Registering MapOutputTracker
19/06/07 12:56:05 INFO spark.SparkEnv: Registering BlockManagerMaster
19/06/07 12:56:05 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-c38a27e3-c483-4f56-ab7f-56e4c1be0832
19/06/07 12:56:05 INFO storage.MemoryStore: MemoryStore started with capacity 530.0 MB
19/06/07 12:56:06 INFO spark.SparkEnv: Registering OutputCommitCoordinator
19/06/07 12:56:06 INFO util.Utils: Successfully started service 'SparkUI' on port 4040.
19/06/07 12:56:06 INFO ui.SparkUI: Started SparkUI at http://10.188.223.5:4040
19/06/07 12:56:06 INFO spark.SparkContext: Added JAR file:/home/ak_bng/spark_jars/Simple_Project-assembly-1.0.jar at spark://10.188.223.5:44220/jars/Simple_Project-assembly-1.0.jar with timestamp 1559892366578
19/06/07 12:56:06 INFO executor.Executor: Starting executor ID driver on host localhost
19/06/07 12:56:06 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 46170.
19/06/07 12:56:06 INFO netty.NettyBlockTransferService: Server created on 46170
19/06/07 12:56:06 INFO storage.BlockManager: external shuffle service port = 7337
19/06/07 12:56:06 INFO storage.BlockManagerMaster: Trying to register BlockManager
19/06/07 12:56:06 INFO storage.BlockManagerMasterEndpoint: Registering block manager localhost:46170 with 530.0 MB RAM, BlockManagerId(driver, localhost, 46170)
19/06/07 12:56:06 INFO storage.BlockManagerMaster: Registered BlockManager
19/06/07 12:56:07 INFO scheduler.EventLoggingListener: Logging events to hdfs://indelsrv185.in.kworld.kpmg.com:8020/user/spark/applicationHistory/local-1559892366602
19/06/07 12:56:07 INFO spark.SparkContext: Registered listener com.cloudera.spark.lineage.ClouderaNavigatorListener
19/06/07 12:56:08 INFO parquet.ParquetRelation: Listing hdfs://10.188.223.5:8020/user/ak_bng/products on driver
19/06/07 12:56:08 INFO parquet.ParquetRelation: Listing hdfs://10.188.223.5:8020/user/ak_bng/categories on driver
java.lang.reflect.InvocationTargetException
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.xerial.snappy.SnappyLoader.loadNativeLibrary(SnappyLoader.java:312)
at org.xerial.snappy.SnappyLoader.load(SnappyLoader.java:219)
at org.xerial.snappy.Snappy.<clinit>(Snappy.java:44)
at org.apache.spark.io.SnappyCompressionCodec$.liftedTree1$1(CompressionCodec.scala:169)
at org.apache.spark.io.SnappyCompressionCodec$.org$apache$spark$io$SnappyCompressionCodec$$version$lzycompute(CompressionCodec.scala:168)
at org.apache.spark.io.SnappyCompressionCodec$.org$apache$spark$io$SnappyCompressionCodec$$version(CompressionCodec.scala:168)
at org.apache.spark.io.SnappyCompressionCodec.<init>(CompressionCodec.scala:152)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:72)
at org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:65)
at org.apache.spark.broadcast.TorrentBroadcast.org$apache$spark$broadcast$TorrentBroadcast$$setConf(TorrentBroadcast.scala:74)
at org.apache.spark.broadcast.TorrentBroadcast.<init>(TorrentBroadcast.scala:81)
at org.apache.spark.broadcast.TorrentBroadcastFactory.newBroadcast(TorrentBroadcastFactory.scala:34)
at org.apache.spark.broadcast.BroadcastManager.newBroadcast(BroadcastManager.scala:63)
at org.apache.spark.SparkContext.broadcast(SparkContext.scala:1334)
at org.apache.spark.sql.execution.datasources.DataSourceStrategy$.apply(DataSourceStrategy.scala:126)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$1.apply(QueryPlanner.scala:58)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$1.apply(QueryPlanner.scala:58)
at scala.collection.Iterator$$anon$13.hasNext(Iterator.scala:371)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.plan(QueryPlanner.scala:59)
at org.apache.spark.sql.execution.QueryExecution.sparkPlan$lzycompute(QueryExecution.scala:48)
at org.apache.spark.sql.execution.QueryExecution.sparkPlan(QueryExecution.scala:46)
at org.apache.spark.sql.execution.QueryExecution.executedPlan$lzycompute(QueryExecution.scala:53)
at org.apache.spark.sql.execution.QueryExecution.executedPlan(QueryExecution.scala:53)
at org.apache.spark.sql.execution.QueryExecution$$anonfun$toString$5.apply(QueryExecution.scala:81)
at org.apache.spark.sql.execution.QueryExecution$$anonfun$toString$5.apply(QueryExecution.scala:81)
at org.apache.spark.sql.execution.QueryExecution.stringOrError(QueryExecution.scala:61)
at org.apache.spark.sql.execution.QueryExecution.toString(QueryExecution.scala:81)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:50)
at org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelation.run(InsertIntoHadoopFsRelation.scala:106)
at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult$lzycompute(commands.scala:58)
at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult(commands.scala:56)
at org.apache.spark.sql.execution.ExecutedCommand.doExecute(commands.scala:70)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$5.apply(SparkPlan.scala:132)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$5.apply(SparkPlan.scala:130)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:130)
at org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:56)
at org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:56)
at org.apache.spark.sql.execution.datasources.ResolvedDataSource$.apply(ResolvedDataSource.scala:256)
at org.apache.spark.sql.DataFrameWriter.dataSource$lzycompute$1(DataFrameWriter.scala:181)
at org.apache.spark.sql.DataFrameWriter.org$apache$spark$sql$DataFrameWriter$$dataSource$1(DataFrameWriter.scala:181)
at org.apache.spark.sql.DataFrameWriter$$anonfun$save$1.apply$mcV$sp(DataFrameWriter.scala:188)
at org.apache.spark.sql.DataFrameWriter.executeAndCallQEListener(DataFrameWriter.scala:154)
at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:188)
at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:172)
at org.apache.spark.sql.DataFrameWriter.parquet(DataFrameWriter.scala:370)
at SimpleApp$.main(SimpleApp.scala:169)
at SimpleApp.main(SimpleApp.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:730)
at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:181)
at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:206)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:121)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.lang.UnsatisfiedLinkError: /tmp/snappy-1.0.4.1-libsnappyjava.so: /tmp/snappy-1.0.4.1-libsnappyjava.so: failed to map segment from shared object: Operation not permitted
at java.lang.ClassLoader$NativeLibrary.load(Native Method)
at java.lang.ClassLoader.loadLibrary0(ClassLoader.java:1941)
at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1824)
at java.lang.Runtime.load0(Runtime.java:809)
at java.lang.System.load(System.java:1086)
at org.xerial.snappy.SnappyNativeLoader.load(SnappyNativeLoader.java:39)
... 65 more
Exception in thread "main" java.lang.IllegalArgumentException: java.lang.NoClassDefFoundError: Could not initialize class org.xerial.snappy.Snappy
at org.apache.spark.io.SnappyCompressionCodec$.liftedTree1$1(CompressionCodec.scala:171)
at org.apache.spark.io.SnappyCompressionCodec$.org$apache$spark$io$SnappyCompressionCodec$$version$lzycompute(CompressionCodec.scala:168)
at org.apache.spark.io.SnappyCompressionCodec$.org$apache$spark$io$SnappyCompressionCodec$$version(CompressionCodec.scala:168)
at org.apache.spark.io.SnappyCompressionCodec.<init>(CompressionCodec.scala:152)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:72)
at org.apache.spark.io.CompressionCodec$.createCodec(CompressionCodec.scala:65)
at org.apache.spark.broadcast.TorrentBroadcast.org$apache$spark$broadcast$TorrentBroadcast$$setConf(TorrentBroadcast.scala:74)
at org.apache.spark.broadcast.TorrentBroadcast.<init>(TorrentBroadcast.scala:81)
at org.apache.spark.broadcast.TorrentBroadcastFactory.newBroadcast(TorrentBroadcastFactory.scala:34)
at org.apache.spark.broadcast.BroadcastManager.newBroadcast(BroadcastManager.scala:63)
at org.apache.spark.SparkContext.broadcast(SparkContext.scala:1334)
at org.apache.spark.sql.execution.datasources.DataSourceStrategy$.apply(DataSourceStrategy.scala:126)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$1.apply(QueryPlanner.scala:58)
at org.apache.spark.sql.catalyst.planning.QueryPlanner$$anonfun$1.apply(QueryPlanner.scala:58)
at scala.collection.Iterator$$anon$13.hasNext(Iterator.scala:371)
at org.apache.spark.sql.catalyst.planning.QueryPlanner.plan(QueryPlanner.scala:59)
at org.apache.spark.sql.execution.QueryExecution.sparkPlan$lzycompute(QueryExecution.scala:48)
at org.apache.spark.sql.execution.QueryExecution.sparkPlan(QueryExecution.scala:46)
at org.apache.spark.sql.execution.QueryExecution.executedPlan$lzycompute(QueryExecution.scala:53)
at org.apache.spark.sql.execution.QueryExecution.executedPlan(QueryExecution.scala:53)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:51)
at org.apache.spark.sql.execution.datasources.InsertIntoHadoopFsRelation.run(InsertIntoHadoopFsRelation.scala:106)
at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult$lzycompute(commands.scala:58)
at org.apache.spark.sql.execution.ExecutedCommand.sideEffectResult(commands.scala:56)
at org.apache.spark.sql.execution.ExecutedCommand.doExecute(commands.scala:70)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$5.apply(SparkPlan.scala:132)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$execute$5.apply(SparkPlan.scala:130)
at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
at org.apache.spark.sql.execution.SparkPlan.execute(SparkPlan.scala:130)
at org.apache.spark.sql.execution.QueryExecution.toRdd$lzycompute(QueryExecution.scala:56)
at org.apache.spark.sql.execution.QueryExecution.toRdd(QueryExecution.scala:56)
at org.apache.spark.sql.execution.datasources.ResolvedDataSource$.apply(ResolvedDataSource.scala:256)
at org.apache.spark.sql.DataFrameWriter.dataSource$lzycompute$1(DataFrameWriter.scala:181)
at org.apache.spark.sql.DataFrameWriter.org$apache$spark$sql$DataFrameWriter$$dataSource$1(DataFrameWriter.scala:181)
at org.apache.spark.sql.DataFrameWriter$$anonfun$save$1.apply$mcV$sp(DataFrameWriter.scala:188)
at org.apache.spark.sql.DataFrameWriter.executeAndCallQEListener(DataFrameWriter.scala:154)
at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:188)
at org.apache.spark.sql.DataFrameWriter.save(DataFrameWriter.scala:172)
at org.apache.spark.sql.DataFrameWriter.parquet(DataFrameWriter.scala:370)
at SimpleApp$.main(SimpleApp.scala:169)
at SimpleApp.main(SimpleApp.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:730)
at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:181)
at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:206)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:121)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: java.lang.NoClassDefFoundError: Could not initialize class org.xerial.snappy.Snappy
at org.apache.spark.io.SnappyCompressionCodec$.liftedTree1$1(CompressionCodec.scala:169)
... 53 more
19/06/07 12:56:08 INFO spark.SparkContext: Invoking stop() from shutdown hook
19/06/07 12:56:08 INFO ui.SparkUI: Stopped Spark web UI at http://10.188.223.5:4040
19/06/07 12:56:08 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
19/06/07 12:56:09 INFO storage.MemoryStore: MemoryStore cleared
19/06/07 12:56:09 INFO storage.BlockManager: BlockManager stopped
19/06/07 12:56:09 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
19/06/07 12:56:09 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
19/06/07 12:56:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Shutting down remote daemon.
19/06/07 12:56:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remote daemon shut down; proceeding with flushing remote transports.
19/06/07 12:56:09 INFO Remoting: Remoting shut down
19/06/07 12:56:09 INFO remote.RemoteActorRefProvider$RemotingTerminator: Remoting shut down.
19/06/07 12:56:09 INFO spark.SparkContext: Successfully stopped SparkContext
19/06/07 12:56:09 INFO util.ShutdownHookManager: Shutdown hook called
19/06/07 12:56:09 INFO util.ShutdownHookManager: Deleting directory /tmp/spark-111712ef-39a8-41b6-bf6d-5d317d954fa1
spark submit command:
spark-submit --class SimpleApp --master local[8] /home/ak_bng/spark_jars/Simple_Project-assembly-1.0.jar.
I went through few links to resolve this issue(Snappy Compression not working due to tmp folder previliges, Apache Spark - Parquet / Snappy compression error, ) but none couldn't really provide a solution for this.
I had run Spark on HDFS (separate installation) successfully without any errors before. The problem started coming once CDHwas installed.
I am new to setting up cluster and quite don't understand what the issue is here and how to resolve it. Can some one help please shed some light on this.
I am using:
CDH 5.16
Spark 1.6.0
Server OS: RHEL 7
Hadoop 2.6
I am trying to run a Spark job in Server. It is not throwing error when I am running any normal println operation. I am unable to understand the error.
I am trying to deploy the code in yarn client mode. Many has said to use chmod 777 in warehouse directories, to disable/enable .enableHiveSupport() but it never works. Need help. I have tried a lot to run and deploy this code in client mode in by spark-submit command, its not working. This code is working like a charm in Eclipse but not by spark-submit. Need help. Thanks.
Code:
package com.issuer.pack3.spark
import org.apache.spark.SparkConf
import org.apache.spark.SparkContext
import org.apache.spark.sql.SQLContext
import org.apache.spark.sql._
import org.apache.spark.sql.functions._
import org.apache.spark.storage.StorageLevel._
import org.apache.spark.sql.hive.HiveContext
object SparkApplication3 {
def main(args:Array[String])
{
val warehouseLocation = "/hadoop/spark-2.2.1/spark-warehouse"
val sparksessionobject = SparkSession
.builder()
.master("local[*]")
.appName("SparkSession1")
.config("spark.sql.warehouse.dir", warehouseLocation)
.config("spark.executor.memory", "10g")
.config("spark.driver.memory","10g")
.config("spark.sql.shuffle.partitions", "10000")
.config("spark.driver.maxResultSize", "200g")
.config("spark.memory.offHeap.enabled", "true")
.config("spark.memory.offHeap.size", "200g")
.config("spark.debug.maxToStringFields", "100")
// .enableHiveSupport()
.getOrCreate()
val joined_acc_custinfo_trips = sparksessionobject.sqlContext.read.format("csv")
.option("header", "true")
.option("inferSchema", "true").load("/home/user/input/part-00000.csv")
joined_acc_custinfo_trips.registerTempTable("joined_acc_custinfo_trips")
val query9 = "--SQL QUERY IS HERE--"
val res06 = sparksessionobject.sqlContext.sql(query9.toString)
res06.repartition(1).write.json("/hadoop/OP/part1/")
println("-------------------------------------END OF FIRST STAGE-------------------------------------------")
println("-------------------------------------END OF FIRST STAGE-------------------------------------------")
println("-------------------------------------END OF FIRST STAGE-------------------------------------------")
println("-------------------------------------END OF FIRST STAGE-------------------------------------------")
println("-------------------------------------END OF FIRST STAGE-------------------------------------------")
}
}
Error:
[user#Analytic ~]$ spark-submit --master yarn --deploy-mode client --class "com.issuer.pack3.spark.SparkApplication3" /home/user/app2.jar
18/08/20 17:25:21 INFO spark.SparkContext: Running Spark version 2.2.1
18/08/20 17:25:21 WARN util.NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
18/08/20 17:25:21 INFO spark.SparkContext: Submitted application: SparkSession1
18/08/20 17:25:21 INFO spark.SecurityManager: Changing view acls to: bhaskar
18/08/20 17:25:21 INFO spark.SecurityManager: Changing modify acls to: bhaskar
18/08/20 17:25:21 INFO spark.SecurityManager: Changing view acls groups to:
18/08/20 17:25:21 INFO spark.SecurityManager: Changing modify acls groups to:
18/08/20 17:25:21 INFO spark.SecurityManager: SecurityManager: authentication disabled; ui acls disabled; users with view permissions: Set(bhaskar); groups with view permissions: Set(); users with modify permissions: Set(bhaskar); groups with modify permissions: Set()
18/08/20 17:25:22 INFO util.Utils: Successfully started service 'sparkDriver' on port 40090.
18/08/20 17:25:22 INFO spark.SparkEnv: Registering MapOutputTracker
18/08/20 17:25:22 INFO spark.SparkEnv: Registering BlockManagerMaster
18/08/20 17:25:22 INFO storage.BlockManagerMasterEndpoint: Using org.apache.spark.storage.DefaultTopologyMapper for getting topology information
18/08/20 17:25:22 INFO storage.BlockManagerMasterEndpoint: BlockManagerMasterEndpoint up
18/08/20 17:25:22 INFO storage.DiskBlockManager: Created local directory at /tmp/blockmgr-2af112f6-030a-4f01-91fc-8e69f1281fde
18/08/20 17:25:22 INFO memory.MemoryStore: MemoryStore started with capacity 200.4 GB
18/08/20 17:25:22 INFO spark.SparkEnv: Registering OutputCommitCoordinator
18/08/20 17:25:22 INFO util.log: Logging initialized #1480ms
18/08/20 17:25:22 INFO server.Server: jetty-9.3.z-SNAPSHOT
18/08/20 17:25:22 INFO server.Server: Started #1542ms
18/08/20 17:25:22 WARN util.Utils: Service 'SparkUI' could not bind on port 4040. Attempting port 4041.
18/08/20 17:25:22 INFO server.AbstractConnector: Started ServerConnector#5cad8b7d{HTTP/1.1,[http/1.1]}{0.0.0.0:4041}
18/08/20 17:25:22 INFO util.Utils: Successfully started service 'SparkUI' on port 4041.
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#492fc69e{/jobs,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#6d2260db{/jobs/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#49bf29c6{/jobs/job,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#7668d560{/jobs/job/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#126be319{/stages,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#5c371e13{/stages/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#1e34c607{/stages/stage,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#9257031{/stages/stage/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#7726e185{/stages/pool,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#282308c3{/stages/pool/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#1db0ec27{/storage,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#d4ab71a{/storage/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#1af05b03{/storage/rdd,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#1ad777f{/storage/rdd/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#438bad7c{/environment,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#4fdf8f12{/environment/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#54f5f647{/executors,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#5a6d5a8f{/executors/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#315ba14a{/executors/threadDump,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#27f0ad19{/executors/threadDump/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#38d5b107{/static,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#77e2a6e2{/,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#199e4c2b{/api,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#2c1dc8e{/jobs/job/kill,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#4e7095ac{/stages/stage/kill,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO ui.SparkUI: Bound SparkUI to 0.0.0.0, and started at http://192.168.70.13:4041
18/08/20 17:25:22 INFO spark.SparkContext: Added JAR file:/home/bhaskar/app2.jar at spark://192.168.70.13:40090/jars/app2.jar with timestamp 1534766122528
18/08/20 17:25:22 INFO executor.Executor: Starting executor ID driver on host localhost
18/08/20 17:25:22 INFO util.Utils: Successfully started service 'org.apache.spark.network.netty.NettyBlockTransferService' on port 41973.
18/08/20 17:25:22 INFO netty.NettyBlockTransferService: Server created on 192.168.70.13:41973
18/08/20 17:25:22 INFO storage.BlockManager: Using org.apache.spark.storage.RandomBlockReplicationPolicy for block replication policy
18/08/20 17:25:22 INFO storage.BlockManagerMaster: Registering BlockManager BlockManagerId(driver, 192.168.70.13, 41973, None)
18/08/20 17:25:22 INFO storage.BlockManagerMasterEndpoint: Registering block manager 192.168.70.13:41973 with 200.4 GB RAM, BlockManagerId(driver, 192.168.70.13, 41973, None)
18/08/20 17:25:22 INFO storage.BlockManagerMaster: Registered BlockManager BlockManagerId(driver, 192.168.70.13, 41973, None)
18/08/20 17:25:22 INFO storage.BlockManager: Initialized BlockManager: BlockManagerId(driver, 192.168.70.13, 41973, None)
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#5560bcdf{/metrics/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO internal.SharedState: Setting hive.metastore.warehouse.dir ('null') to the value of spark.sql.warehouse.dir ('/hadoop/spark-2.2.1/spark-warehouse').
18/08/20 17:25:22 INFO internal.SharedState: Warehouse path is '/hadoop/spark-2.2.1/spark-warehouse'.
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#4c98a6d5{/SQL,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#7f02251{/SQL/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#1bcf67e8{/SQL/execution,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#53692008{/SQL/execution/json,null,AVAILABLE,#Spark}
18/08/20 17:25:22 INFO handler.ContextHandler: Started o.s.j.s.ServletContextHandler#3a4ba480{/static/sql,null,AVAILABLE,#Spark}
18/08/20 17:25:23 INFO hive.HiveUtils: Initializing HiveMetastoreConnection version 1.2.1 using Spark classes.
18/08/20 17:25:23 INFO metastore.HiveMetaStore: 0: Opening raw store with implemenation class:org.apache.hadoop.hive.metastore.ObjectStore
18/08/20 17:25:23 INFO metastore.ObjectStore: ObjectStore, initialize called
18/08/20 17:25:23 INFO DataNucleus.Persistence: Property hive.metastore.integral.jdo.pushdown unknown - will be ignored
18/08/20 17:25:23 INFO DataNucleus.Persistence: Property datanucleus.cache.level2 unknown - will be ignored
18/08/20 17:25:25 INFO metastore.ObjectStore: Setting MetaStore object pin classes with hive.metastore.cache.pinobjtypes="Table,StorageDescriptor,SerDeInfo,Partition,Database,Type,FieldSchema,Order"
18/08/20 17:25:25 INFO DataNucleus.Datastore: The class "org.apache.hadoop.hive.metastore.model.MFieldSchema" is tagged as "embedded-only" so does not have its own datastore table.
18/08/20 17:25:25 INFO DataNucleus.Datastore: The class "org.apache.hadoop.hive.metastore.model.MOrder" is tagged as "embedded-only" so does not have its own datastore table.
18/08/20 17:25:26 INFO DataNucleus.Datastore: The class "org.apache.hadoop.hive.metastore.model.MFieldSchema" is tagged as "embedded-only" so does not have its own datastore table.
18/08/20 17:25:26 INFO DataNucleus.Datastore: The class "org.apache.hadoop.hive.metastore.model.MOrder" is tagged as "embedded-only" so does not have its own datastore table.
18/08/20 17:25:26 INFO metastore.MetaStoreDirectSql: Using direct SQL, underlying DB is DERBY
18/08/20 17:25:26 INFO metastore.ObjectStore: Initialized ObjectStore
18/08/20 17:25:26 WARN metastore.ObjectStore: Version information not found in metastore. hive.metastore.schema.verification is not enabled so recording the schema version 1.2.0
18/08/20 17:25:26 WARN metastore.ObjectStore: Failed to get database default, returning NoSuchObjectException
18/08/20 17:25:26 INFO metastore.HiveMetaStore: Added admin role in metastore
18/08/20 17:25:26 INFO metastore.HiveMetaStore: Added public role in metastore
18/08/20 17:25:26 INFO metastore.HiveMetaStore: No user is added in admin role, since config is empty
18/08/20 17:25:26 INFO metastore.HiveMetaStore: 0: get_all_databases
18/08/20 17:25:26 INFO HiveMetaStore.audit: ugi=bhaskar ip=unknown-ip-addr cmd=get_all_databases
18/08/20 17:25:27 INFO metastore.HiveMetaStore: 0: get_functions: db=default pat=*
18/08/20 17:25:27 INFO HiveMetaStore.audit: ugi=bhaskar ip=unknown-ip-addr cmd=get_functions: db=default pat=*
18/08/20 17:25:27 INFO DataNucleus.Datastore: The class "org.apache.hadoop.hive.metastore.model.MResourceUri" is tagged as "embedded-only" so does not have its own datastore table.
Exception in thread "main" java.lang.IllegalArgumentException: Error while instantiating 'org.apache.spark.sql.hive.HiveSessionStateBuilder':
at org.apache.spark.sql.SparkSession$.org$apache$spark$sql$SparkSession$$instantiateSessionState(SparkSession.scala:1062)
at org.apache.spark.sql.SparkSession$$anonfun$sessionState$2.apply(SparkSession.scala:137)
at org.apache.spark.sql.SparkSession$$anonfun$sessionState$2.apply(SparkSession.scala:136)
at scala.Option.getOrElse(Option.scala:121)
at org.apache.spark.sql.SparkSession.sessionState$lzycompute(SparkSession.scala:136)
at org.apache.spark.sql.SparkSession.sessionState(SparkSession.scala:133)
at org.apache.spark.sql.DataFrameReader.<init>(DataFrameReader.scala:689)
at org.apache.spark.sql.SparkSession.read(SparkSession.scala:645)
at org.apache.spark.sql.SQLContext.read(SQLContext.scala:504)
at com.issuer.pack3.spark.SparkApplication3$.main(SparkApplication3.scala:58)
at com.issuer.pack3.spark.SparkApplication3.main(SparkApplication3.scala)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.spark.deploy.SparkSubmit$.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:775)
at org.apache.spark.deploy.SparkSubmit$.doRunMain$1(SparkSubmit.scala:180)
at org.apache.spark.deploy.SparkSubmit$.submit(SparkSubmit.scala:205)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:119)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
Caused by: org.apache.spark.sql.AnalysisException: java.lang.RuntimeException: java.net.ConnectException: Call From Analytic/192.168.70.13 to localhost:8020 failed on connection exception: java.net.ConnectException: Connection refused; For more details see: http://wiki.apache.org/hadoop/ConnectionRefused;
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:106)
at org.apache.spark.sql.hive.HiveExternalCatalog.databaseExists(HiveExternalCatalog.scala:194)
at org.apache.spark.sql.internal.SharedState.externalCatalog$lzycompute(SharedState.scala:105)
at org.apache.spark.sql.internal.SharedState.externalCatalog(SharedState.scala:93)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.externalCatalog(HiveSessionStateBuilder.scala:39)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog$lzycompute(HiveSessionStateBuilder.scala:54)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog(HiveSessionStateBuilder.scala:52)
at org.apache.spark.sql.hive.HiveSessionStateBuilder.catalog(HiveSessionStateBuilder.scala:35)
at org.apache.spark.sql.internal.BaseSessionStateBuilder.build(BaseSessionStateBuilder.scala:289)
at org.apache.spark.sql.SparkSession$.org$apache$spark$sql$SparkSession$$instantiateSessionState(SparkSession.scala:1059)
... 19 more
Caused by: java.lang.RuntimeException: java.net.ConnectException: Call From Analytic/192.168.70.13 to localhost:8020 failed on connection exception: java.net.ConnectException: Connection refused; For more details see: http://wiki.apache.org/hadoop/ConnectionRefused
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:522)
at org.apache.spark.sql.hive.client.HiveClientImpl.<init>(HiveClientImpl.scala:191)
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.spark.sql.hive.client.IsolatedClientLoader.createClient(IsolatedClientLoader.scala:264)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:362)
at org.apache.spark.sql.hive.HiveUtils$.newClientForMetadata(HiveUtils.scala:266)
at org.apache.spark.sql.hive.HiveExternalCatalog.client$lzycompute(HiveExternalCatalog.scala:66)
at org.apache.spark.sql.hive.HiveExternalCatalog.client(HiveExternalCatalog.scala:65)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply$mcZ$sp(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$databaseExists$1.apply(HiveExternalCatalog.scala:195)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:97)
... 28 more
Caused by: java.net.ConnectException: Call From Analytic/192.168.70.13 to localhost:8020 failed on connection exception: java.net.ConnectException: Connection refused; For more details see: http://wiki.apache.org/hadoop/ConnectionRefused
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
at org.apache.hadoop.net.NetUtils.wrapWithMessage(NetUtils.java:792)
at org.apache.hadoop.net.NetUtils.wrapException(NetUtils.java:732)
at org.apache.hadoop.ipc.Client.call(Client.java:1479)
at org.apache.hadoop.ipc.Client.call(Client.java:1412)
at org.apache.hadoop.ipc.ProtobufRpcEngine$Invoker.invoke(ProtobufRpcEngine.java:229)
at com.sun.proxy.$Proxy19.getFileInfo(Unknown Source)
at org.apache.hadoop.hdfs.protocolPB.ClientNamenodeProtocolTranslatorPB.getFileInfo(ClientNamenodeProtocolTranslatorPB.java:771)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:498)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invokeMethod(RetryInvocationHandler.java:191)
at org.apache.hadoop.io.retry.RetryInvocationHandler.invoke(RetryInvocationHandler.java:102)
at com.sun.proxy.$Proxy20.getFileInfo(Unknown Source)
at org.apache.hadoop.hdfs.DFSClient.getFileInfo(DFSClient.java:2108)
at org.apache.hadoop.hdfs.DistributedFileSystem$22.doCall(DistributedFileSystem.java:1305)
at org.apache.hadoop.hdfs.DistributedFileSystem$22.doCall(DistributedFileSystem.java:1301)
at org.apache.hadoop.fs.FileSystemLinkResolver.resolve(FileSystemLinkResolver.java:81)
at org.apache.hadoop.hdfs.DistributedFileSystem.getFileStatus(DistributedFileSystem.java:1317)
at org.apache.hadoop.fs.FileSystem.exists(FileSystem.java:1426)
at org.apache.hadoop.hive.ql.session.SessionState.createRootHDFSDir(SessionState.java:596)
at org.apache.hadoop.hive.ql.session.SessionState.createSessionDirs(SessionState.java:554)
at org.apache.hadoop.hive.ql.session.SessionState.start(SessionState.java:508)
... 42 more
Caused by: java.net.ConnectException: Connection refused
at sun.nio.ch.SocketChannelImpl.checkConnect(Native Method)
at sun.nio.ch.SocketChannelImpl.finishConnect(SocketChannelImpl.java:717)
at org.apache.hadoop.net.SocketIOWithTimeout.connect(SocketIOWithTimeout.java:206)
at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:531)
at org.apache.hadoop.net.NetUtils.connect(NetUtils.java:495)
at org.apache.hadoop.ipc.Client$Connection.setupConnection(Client.java:614)
at org.apache.hadoop.ipc.Client$Connection.setupIOstreams(Client.java:712)
at org.apache.hadoop.ipc.Client$Connection.access$2900(Client.java:375)
at org.apache.hadoop.ipc.Client.getConnection(Client.java:1528)
at org.apache.hadoop.ipc.Client.call(Client.java:1451)
... 62 more
18/08/20 17:25:27 INFO spark.SparkContext: Invoking stop() from shutdown hook
18/08/20 17:25:27 INFO server.AbstractConnector: Stopped Spark#5cad8b7d{HTTP/1.1,[http/1.1]}{0.0.0.0:4041}
18/08/20 17:25:27 INFO ui.SparkUI: Stopped Spark web UI at http://192.168.70.13:4041
18/08/20 17:25:27 INFO spark.MapOutputTrackerMasterEndpoint: MapOutputTrackerMasterEndpoint stopped!
18/08/20 17:25:27 INFO memory.MemoryStore: MemoryStore cleared
18/08/20 17:25:27 INFO storage.BlockManager: BlockManager stopped
18/08/20 17:25:27 INFO storage.BlockManagerMaster: BlockManagerMaster stopped
18/08/20 17:25:27 INFO scheduler.OutputCommitCoordinator$OutputCommitCoordinatorEndpoint: OutputCommitCoordinator stopped!
18/08/20 17:25:27 INFO spark.SparkContext: Successfully stopped SparkContext
18/08/20 17:25:27 INFO util.ShutdownHookManager: Shutdown hook called
18/08/20 17:25:27 INFO util.ShutdownHookManager: Deleting directory /tmp/spark-739175a5-4864-4fd0-8e1d-a22ff371f821
[user#Analytic ~]$
Please use below spark config while creating the spark session.
.config("hive.metastore.uris", "placeyoururi")
or you can pass the hive-site.xml as below in the spark-submit.
--files configpath/hive-site.xml
Also use .enableHiveSupport() for both approaches.
Hope it helps you.
I 've just upgraded to spark 2.0.0 from 1.3.1, I wrote a simple code to interact with hive（1.2.1） used spark sql, I've put the hive-site.xml into spark conf directory, and I get the expected results from the sql, BUT it throws a weird AlreadyExistsException(message:Database default already exists) , how to ignore this?
【Code】
from pyspark.sql import SparkSession
ss = SparkSession.builder.appName("test").master("local") \
.config("spark.ui.port", "4041") \
.enableHiveSupport()\
.getOrCreate()
ss.sparkContext.setLogLevel("INFO")
ss.sql("show tables").show()
【Log】
Setting default log level to "WARN".
To adjust logging level use sc.setLogLevel(newLevel).
16/08/08 19:41:22 WARN util.NativeCodeLoader: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
16/08/08 19:41:24 INFO execution.SparkSqlParser: Parsing command: show tables
16/08/08 19:41:25 INFO hive.HiveUtils: Initializing HiveMetastoreConnection version 1.2.1 using Spark classes.
16/08/08 19:41:26 INFO metastore.HiveMetaStore: 0: Opening raw store with implemenation class:org.apache.hadoop.hive.metastore.ObjectStore
16/08/08 19:41:26 INFO metastore.ObjectStore: ObjectStore, initialize called
16/08/08 19:41:26 INFO DataNucleus.Persistence: Property hive.metastore.integral.jdo.pushdown unknown - will be ignored
16/08/08 19:41:26 INFO DataNucleus.Persistence: Property datanucleus.cache.level2 unknown - will be ignored
16/08/08 19:41:26 INFO metastore.ObjectStore: Setting MetaStore object pin classes with hive.metastore.cache.pinobjtypes="Table,StorageDescriptor,SerDeInfo,Partition,Database,Type,FieldSchema,Order"
16/08/08 19:41:27 INFO DataNucleus.Datastore: The class "org.apache.hadoop.hive.metastore.model.MFieldSchema" is tagged as "embedded-only" so does not have its own datastore table.
16/08/08 19:41:27 INFO DataNucleus.Datastore: The class "org.apache.hadoop.hive.metastore.model.MOrder" is tagged as "embedded-only" so does not have its own datastore table.
16/08/08 19:41:27 INFO DataNucleus.Datastore: The class "org.apache.hadoop.hive.metastore.model.MFieldSchema" is tagged as "embedded-only" so does not have its own datastore table.
16/08/08 19:41:27 INFO DataNucleus.Datastore: The class "org.apache.hadoop.hive.metastore.model.MOrder" is tagged as "embedded-only" so does not have its own datastore table.
16/08/08 19:41:27 INFO DataNucleus.Query: Reading in results for query "org.datanucleus.store.rdbms.query.SQLQuery#0" since the connection used is closing
16/08/08 19:41:27 INFO metastore.MetaStoreDirectSql: Using direct SQL, underlying DB is MYSQL
16/08/08 19:41:27 INFO metastore.ObjectStore: Initialized ObjectStore
16/08/08 19:41:27 INFO metastore.HiveMetaStore: Added admin role in metastore
16/08/08 19:41:27 INFO metastore.HiveMetaStore: Added public role in metastore
16/08/08 19:41:27 INFO metastore.HiveMetaStore: No user is added in admin role, since config is empty
16/08/08 19:41:27 INFO metastore.HiveMetaStore: 0: get_all_databases
16/08/08 19:41:27 INFO HiveMetaStore.audit: ugi=felix ip=unknown-ip-addr cmd=get_all_databases
16/08/08 19:41:28 INFO metastore.HiveMetaStore: 0: get_functions: db=default pat=*
16/08/08 19:41:28 INFO HiveMetaStore.audit: ugi=felix ip=unknown-ip-addr cmd=get_functions: db=default pat=*
16/08/08 19:41:28 INFO DataNucleus.Datastore: The class "org.apache.hadoop.hive.metastore.model.MResourceUri" is tagged as "embedded-only" so does not have its own datastore table.
16/08/08 19:41:28 INFO session.SessionState: Created local directory: /usr/local/Cellar/hive/1.2.1/libexec/conf/tmp/3fbc3578-fdeb-40a9-8469-7c851cb3733c_resources
16/08/08 19:41:28 INFO session.SessionState: Created HDFS directory: /tmp/hive/felix/3fbc3578-fdeb-40a9-8469-7c851cb3733c
16/08/08 19:41:28 INFO session.SessionState: Created local directory: /usr/local/Cellar/hive/1.2.1/libexec/conf/tmp/felix/3fbc3578-fdeb-40a9-8469-7c851cb3733c
16/08/08 19:41:28 INFO session.SessionState: Created HDFS directory: /tmp/hive/felix/3fbc3578-fdeb-40a9-8469-7c851cb3733c/_tmp_space.db
16/08/08 19:41:28 INFO client.HiveClientImpl: Warehouse location for Hive client (version 1.2.1) is /user/hive/warehouse
16/08/08 19:41:28 INFO session.SessionState: Created local directory: /usr/local/Cellar/hive/1.2.1/libexec/conf/tmp/8eaa63ec-9710-499f-bd50-6625bf4459f5_resources
16/08/08 19:41:28 INFO session.SessionState: Created HDFS directory: /tmp/hive/felix/8eaa63ec-9710-499f-bd50-6625bf4459f5
16/08/08 19:41:28 INFO session.SessionState: Created local directory: /usr/local/Cellar/hive/1.2.1/libexec/conf/tmp/felix/8eaa63ec-9710-499f-bd50-6625bf4459f5
16/08/08 19:41:28 INFO session.SessionState: Created HDFS directory: /tmp/hive/felix/8eaa63ec-9710-499f-bd50-6625bf4459f5/_tmp_space.db
16/08/08 19:41:28 INFO client.HiveClientImpl: Warehouse location for Hive client (version 1.2.1) is /user/hive/warehouse
16/08/08 19:41:28 INFO metastore.HiveMetaStore: 0: create_database: Database(name:default, description:default database, locationUri:hdfs://localhost:9900/user/hive/warehouse, parameters:{})
16/08/08 19:41:28 INFO HiveMetaStore.audit: ugi=felix ip=unknown-ip-addr cmd=create_database: Database(name:default, description:default database, locationUri:hdfs://localhost:9900/user/hive/warehouse, parameters:{})
16/08/08 19:41:28 ERROR metastore.RetryingHMSHandler: AlreadyExistsException(message:Database default already exists)
at org.apache.hadoop.hive.metastore.HiveMetaStore$HMSHandler.create_database(HiveMetaStore.java:891)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at org.apache.hadoop.hive.metastore.RetryingHMSHandler.invoke(RetryingHMSHandler.java:107)
at com.sun.proxy.$Proxy22.create_database(Unknown Source)
at org.apache.hadoop.hive.metastore.HiveMetaStoreClient.createDatabase(HiveMetaStoreClient.java:644)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at org.apache.hadoop.hive.metastore.RetryingMetaStoreClient.invoke(RetryingMetaStoreClient.java:156)
at com.sun.proxy.$Proxy23.createDatabase(Unknown Source)
at org.apache.hadoop.hive.ql.metadata.Hive.createDatabase(Hive.java:306)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$createDatabase$1.apply$mcV$sp(HiveClientImpl.scala:291)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$createDatabase$1.apply(HiveClientImpl.scala:291)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$createDatabase$1.apply(HiveClientImpl.scala:291)
at org.apache.spark.sql.hive.client.HiveClientImpl$$anonfun$withHiveState$1.apply(HiveClientImpl.scala:262)
at org.apache.spark.sql.hive.client.HiveClientImpl.liftedTree1$1(HiveClientImpl.scala:209)
at org.apache.spark.sql.hive.client.HiveClientImpl.retryLocked(HiveClientImpl.scala:208)
at org.apache.spark.sql.hive.client.HiveClientImpl.withHiveState(HiveClientImpl.scala:251)
at org.apache.spark.sql.hive.client.HiveClientImpl.createDatabase(HiveClientImpl.scala:290)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$createDatabase$1.apply$mcV$sp(HiveExternalCatalog.scala:99)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$createDatabase$1.apply(HiveExternalCatalog.scala:99)
at org.apache.spark.sql.hive.HiveExternalCatalog$$anonfun$createDatabase$1.apply(HiveExternalCatalog.scala:99)
at org.apache.spark.sql.hive.HiveExternalCatalog.withClient(HiveExternalCatalog.scala:72)
at org.apache.spark.sql.hive.HiveExternalCatalog.createDatabase(HiveExternalCatalog.scala:98)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.createDatabase(SessionCatalog.scala:147)
at org.apache.spark.sql.catalyst.catalog.SessionCatalog.<init>(SessionCatalog.scala:89)
at org.apache.spark.sql.hive.HiveSessionCatalog.<init>(HiveSessionCatalog.scala:51)
at org.apache.spark.sql.hive.HiveSessionState.catalog$lzycompute(HiveSessionState.scala:49)
at org.apache.spark.sql.hive.HiveSessionState.catalog(HiveSessionState.scala:48)
at org.apache.spark.sql.hive.HiveSessionState$$anon$1.<init>(HiveSessionState.scala:63)
at org.apache.spark.sql.hive.HiveSessionState.analyzer$lzycompute(HiveSessionState.scala:63)
at org.apache.spark.sql.hive.HiveSessionState.analyzer(HiveSessionState.scala:62)
at org.apache.spark.sql.execution.QueryExecution.assertAnalyzed(QueryExecution.scala:49)
at org.apache.spark.sql.Dataset$.ofRows(Dataset.scala:64)
at org.apache.spark.sql.SparkSession.sql(SparkSession.scala:582)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:497)
at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:237)
at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
at py4j.Gateway.invoke(Gateway.java:280)
at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:128)
at py4j.commands.CallCommand.execute(CallCommand.java:79)
at py4j.GatewayConnection.run(GatewayConnection.java:211)
at java.lang.Thread.run(Thread.java:745)
16/08/08 19:41:28 INFO metastore.HiveMetaStore: 0: get_database: default
16/08/08 19:41:28 INFO HiveMetaStore.audit: ugi=felix ip=unknown-ip-addr cmd=get_database: default
16/08/08 19:41:28 INFO metastore.HiveMetaStore: 0: get_database: default
16/08/08 19:41:28 INFO HiveMetaStore.audit: ugi=felix ip=unknown-ip-addr cmd=get_database: default
16/08/08 19:41:28 INFO metastore.HiveMetaStore: 0: get_tables: db=default pat=*
16/08/08 19:41:28 INFO HiveMetaStore.audit: ugi=felix ip=unknown-ip-addr cmd=get_tables: db=default pat=*
16/08/08 19:41:28 INFO spark.SparkContext: Starting job: showString at NativeMethodAccessorImpl.java:-2
16/08/08 19:41:28 INFO scheduler.DAGScheduler: Got job 0 (showString at NativeMethodAccessorImpl.java:-2) with 1 output partitions
16/08/08 19:41:28 INFO scheduler.DAGScheduler: Final stage: ResultStage 0 (showString at NativeMethodAccessorImpl.java:-2)
16/08/08 19:41:28 INFO scheduler.DAGScheduler: Parents of final stage: List()
16/08/08 19:41:28 INFO scheduler.DAGScheduler: Missing parents: List()
16/08/08 19:41:28 INFO scheduler.DAGScheduler: Submitting ResultStage 0 (MapPartitionsRDD[2] at showString at NativeMethodAccessorImpl.java:-2), which has no missing parents
16/08/08 19:41:28 INFO memory.MemoryStore: Block broadcast_0 stored as values in memory (estimated size 3.9 KB, free 366.3 MB)
16/08/08 19:41:29 INFO memory.MemoryStore: Block broadcast_0_piece0 stored as bytes in memory (estimated size 2.4 KB, free 366.3 MB)
16/08/08 19:41:29 INFO storage.BlockManagerInfo: Added broadcast_0_piece0 in memory on 172.68.80.25:58224 (size: 2.4 KB, free: 366.3 MB)
16/08/08 19:41:29 INFO spark.SparkContext: Created broadcast 0 from broadcast at DAGScheduler.scala:1012
16/08/08 19:41:29 INFO scheduler.DAGScheduler: Submitting 1 missing tasks from ResultStage 0 (MapPartitionsRDD[2] at showString at NativeMethodAccessorImpl.java:-2)
16/08/08 19:41:29 INFO scheduler.TaskSchedulerImpl: Adding task set 0.0 with 1 tasks
16/08/08 19:41:29 INFO scheduler.TaskSetManager: Starting task 0.0 in stage 0.0 (TID 0, localhost, partition 0, PROCESS_LOCAL, 5827 bytes)
16/08/08 19:41:29 INFO executor.Executor: Running task 0.0 in stage 0.0 (TID 0)
16/08/08 19:41:29 INFO codegen.CodeGenerator: Code generated in 152.42807 ms
16/08/08 19:41:29 INFO executor.Executor: Finished task 0.0 in stage 0.0 (TID 0). 1279 bytes result sent to driver
16/08/08 19:41:29 INFO scheduler.TaskSetManager: Finished task 0.0 in stage 0.0 (TID 0) in 275 ms on localhost (1/1)
16/08/08 19:41:29 INFO scheduler.TaskSchedulerImpl: Removed TaskSet 0.0, whose tasks have all completed, from pool
16/08/08 19:41:29 INFO scheduler.DAGScheduler: ResultStage 0 (showString at NativeMethodAccessorImpl.java:-2) finished in 0.288 s
16/08/08 19:41:29 INFO scheduler.DAGScheduler: Job 0 finished: showString at NativeMethodAccessorImpl.java:-2, took 0.538913 s
16/08/08 19:41:29 INFO codegen.CodeGenerator: Code generated in 13.588415 ms
+-------------------+-----------+
| tableName|isTemporary|
+-------------------+-----------+
| app_visit_log| false|
| cms_article| false|
| p4| false|
| p_bak| false|
+-------------------+-----------+
16/08/08 19:41:29 INFO spark.SparkContext: Invoking stop() from shutdown hook
PS：everything works well when I test it in Java.
Any help will be highly appreciated.
as the log show, this message does not mean any bad thing happened, it only check if default database has been existed;
in fact, these exception logs should not be displayed if the default database exist.
Assuming you don't have an existing Hive warehouse and stuff try setting the following in spark-defaults.xml and restart spark-master.
spark.sql.warehouse.dir=file:///usr/lib/spark/..... (spark install dir)