Execute loop while commands is running - linux

I want to create a loop (blinking LED) while a command (in this case ping) is running.
I am using the Raspberry Pi (Raspbian)
while [ `nmap -p 80 example.com` ] # something like this
do
echo "1">/sys/class/gpio/...
sleep 0.2
echo "0">/sys/class/gpio/...
sleep 0.2
done

What I would do :
any_command & _pid=$!
while kill &>/dev/null -0 $_pid; do
echo "1">/sys/class/gpio/...
sleep 0.2
echo "0">/sys/class/gpio/...
sleep 0.2
done
kill -0 just test if the pid exists =)
the command any_command is launched in the background
& put the command in the background
$! is the integer of the pid of the latest backgrounded job

Related

How to stop a shell script correctly?

I've written a small bash script to start a program every 3 seconds. This script is executed on startup and it saves its PID into a pidfile:
#!/bin/bash
echo $$ > /var/run/start_gps-read.pid
while [ true ] ; do
if [ "$1" == "stop" ] ;
then
echo "Stopping GPS read script ..."
sudo pkill -F /var/run/start_gps-read.pid
exit
fi
sudo /home/dh/gps_read.exe /dev/ttyACM0 /home/dh/gps_files/gpsMaus_1.xml
sleep 3
done
The problem is, I can't terminate the shell script by calling start_gps-read.sh stop. There it should read the pidfile and stop the inital process (from startup).
But when I call stop, the script still runs:
dh#Raspi_DataHarvest:~$ sudo /etc/init.d/start_gps-read.sh stop
Stopping GPS read script ...
dh#Raspi_DataHarvest:~$ ps aux | grep start
root 488 0.0 0.3 5080 2892 ? Ss 13:30 0:00 /bin/bash /etc/init.d/start_gps-read.sh start
dh 1125 0.0 0.2 4296 2016 pts/0 S+ 13:34 0:00 grep start
Note: The script is always executed as sudo.
Does anyone know how to stop my shell script?
The "stop" check needs to come before you overwrite the pid file, and certainly doesn't need to be inside the loop.
if [ "$1" = stop ]; then
echo "Stopping ..."
sudo pkill -F /var/run/start_gps-read.pid
exit
fi
echo "$$" > /var/run/start_gps-read.pid
while true; do
sudo /home/dh/gps_read.exe ...
sleep 3
done

How to send to stdin in bash 10 seconds after starting the process?

What I want to do is:
run a process
wait 10 seconds
send a string to the stdin of the process
This should be done in a bash script.
I've tried:
./script&
pid=$!
sleep 10
echo $string > /proc/${pid}/fd/0
It does work in a shell but not when I run it in a script.
( sleep 10; echo "how you doin?" ) | ./script
Your approach might work on Linux if e.g., your scripts stdin is e.g., something like a FIFO:
myscript(){ tr a-z A-Z; }
rm -f p
mkfifo p
exec 3<>p
myscript <&3 &
pid=$!
echo :waiting
sleep 0.5
echo :writing
file /proc/$pid/fd/0
echo hi > /proc/$pid/fd/0
exec 3>&-
But this /proc/$pid/fd stuff behaves differently on different Unices.
It doesn't work for your case because your scripts stdin is a terminal.
With default terminal settings, the terminal driver will put background proccesses trying to read from it to sleep (by sending them the SIGTTIN signal) and writes to a terminal filedescriptor will just get echoed -- they won't wake up the sleeping background process that's was put to sleep trying to read from the terminal.
What about this (as OP requested it to be done in the script):
#! /bin/bash
./script&
pid=$!
sleep 10
echo $string > /proc/${pid}/fd/0
just proposing the missing element not commenting on coding style ;-)

why nohup does not launch my script?

Here is my script.sh
for ((i=1; i<=400000; i++))
do
echo "loop $i"
echo
numberps=`ps -ef | grep php | wc -l`;
echo $numberps
if [ $numberps -lt 110 ]
then
php5 script.php &
sleep 0.25
else
echo too much process
sleep 0.5
fi
done
When I launch it with:
./script.sh > /dev/null 2>/dev/null &
that works except when I logout from SSH and login again, I cannot stop the script with kill%1 and jobs -l is empty
When I try to launch it with
nohup ./script.sh &
It just ouputs
nohup: ignoring input and appending output to `nohup.out'
but no php5 are running: nohup has no effect at all
I have 2 aleternatives to solve my problem:
1) ./script.sh > /dev/null 2>/dev/null &
If I logout from SSH and login again, How can I delete this job ?
or
2) How to make nohup run correctly ?
Any idea ?
nohup is not supposed to allow you to use jobs -l or kill %1 to kill jobs after logging out and in again.
Instead, you can
Run the script in the foreground in a GNU Screen or tmux session, which lets you log out, log in, reattach and continue the same session.
killall script.sh to kill all running instances of script.sh running on the server.

bash: silently kill background function process

shell gurus,
I have a bash shell script, in which I launch a background function, say foo(), to display a progress bar for a boring and long command:
foo()
{
while [ 1 ]
do
#massively cool progress bar display code
sleep 1
done
}
foo &
foo_pid=$!
boring_and_long_command
kill $foo_pid >/dev/null 2>&1
sleep 10
now, when foo dies, I see the following text:
/home/user/script: line XXX: 30290 Killed foo
This totally destroys the awesomeness of my, otherwise massively cool, progress bar display.
How do I get rid of this message?
kill $foo_pid
wait $foo_pid 2>/dev/null
BTW, I don't know about your massively cool progress bar, but have you seen Pipe Viewer (pv)? http://www.ivarch.com/programs/pv.shtml
Just came across this myself, and realised "disown" is what we are looking for.
foo &
foo_pid=$!
disown
boring_and_long_command
kill $foo_pid
sleep 10
The death message is being printed because the process is still in the shells list of watched "jobs". The disown command will remove the most recently spawned process from this list so that no debug message will be generated when it is killed, even with SIGKILL (-9).
Try to replace your line kill $foo_pid >/dev/null 2>&1 with the line:
(kill $foo_pid 2>&1) >/dev/null
Update:
This answer is not correct for the reason explained by #mklement0 in his comment:
The reason this answer isn't effective with background jobs is that
Bash itself asynchronously, after the kill command has completed,
outputs a status message about the killed job, which you cannot
suppress directly - unless you use wait, as in the accepted answer.
This "hack" seems to work:
# Some trickery to hide killed message
exec 3>&2 # 3 is now a copy of 2
exec 2> /dev/null # 2 now points to /dev/null
kill $foo_pid >/dev/null 2>&1
sleep 1 # sleep to wait for process to die
exec 2>&3 # restore stderr to saved
exec 3>&- # close saved version
and it was inspired from here. World order has been restored.
This is a solution I came up with for a similar problem (wanted to display a timestamp during long running processes). This implements a killsub function that allows you to kill any subshell quietly as long as you know the pid. Note, that the trap instructions are important to include: in case the script is interrupted, the subshell will not continue to run.
foo()
{
while [ 1 ]
do
#massively cool progress bar display code
sleep 1
done
}
#Kills the sub process quietly
function killsub()
{
kill -9 ${1} 2>/dev/null
wait ${1} 2>/dev/null
}
foo &
foo_pid=$!
#Add a trap incase of unexpected interruptions
trap 'killsub ${foo_pid}; exit' INT TERM EXIT
boring_and_long_command
#Kill foo after finished
killsub ${foo_pid}
#Reset trap
trap - INT TERM EXIT
Add at the start of the function:
trap 'exit 0' TERM
You can use set +m before to suppress that. More information on that here
Another way to do it:
func_terminate_service(){
[[ "$(pidof ${1})" ]] && killall ${1}
sleep 2
[[ "$(pidof ${1})" ]] && kill -9 "$(pidof ${1})"
}
call it with
func_terminate_service "firefox"
Yet another way to disable job notifications is to put your command to be backgrounded in a sh -c 'cmd &' construct.
#!/bin/bash
foo()
{
while [ 1 ]
do
sleep 1
done
}
#foo &
#foo_pid=$!
export -f foo
foo_pid=`sh -c 'foo & echo ${!}' | head -1`
# if shell does not support exporting functions (export -f foo)
#arg1='foo() { while [ 1 ]; do sleep 1; done; }'
#foo_pid=`sh -c 'eval "$1"; foo & echo ${!}' _ "$arg1" | head -1`
sleep 3
echo kill ${foo_pid}
kill ${foo_pid}
sleep 3
exit
The error message should come from the default signal handler which dump the signal source in the script. I met the similar errors only on bash 3.x and 4.x. To always quietly kill the child process everywhere(tested on bash 3/4/5, dash, ash, zsh), we could trap the TERM signal at the very first of child process:
#!/bin/sh
## assume script name is test.sh
foo() {
trap 'exit 0' TERM ## here is the key
while true; do sleep 1; done
}
echo before child
ps aux | grep 'test\.s[h]\|slee[p]'
foo &
foo_pid=$!
sleep 1 # wait trap is done
echo before kill
ps aux | grep 'test\.s[h]\|slee[p]'
kill $foo_pid
sleep 1 # wait kill is done
echo after kill
ps aux | grep 'test\.s[h]\|slee[p]'

Get exit code of a background process

I have a command CMD called from my main bourne shell script that takes forever.
I want to modify the script as follows:
Run the command CMD in parallel as a background process (CMD &).
In the main script, have a loop to monitor the spawned command every few seconds. The loop also echoes some messages to stdout indicating progress of the script.
Exit the loop when the spawned command terminates.
Capture and report the exit code of the spawned process.
Can someone give me pointers to accomplish this?
1: In bash, $! holds the PID of the last background process that was executed. That will tell you what process to monitor, anyway.
4: wait <n> waits until the process with PID <n> is complete (it will block until the process completes, so you might not want to call this until you are sure the process is done), and then returns the exit code of the completed process.
2, 3: ps or ps | grep " $! " can tell you whether the process is still running. It is up to you how to understand the output and decide how close it is to finishing. (ps | grep isn't idiot-proof. If you have time you can come up with a more robust way to tell whether the process is still running).
Here's a skeleton script:
# simulate a long process that will have an identifiable exit code
(sleep 15 ; /bin/false) &
my_pid=$!
while ps | grep " $my_pid " # might also need | grep -v grep here
do
echo $my_pid is still in the ps output. Must still be running.
sleep 3
done
echo Oh, it looks like the process is done.
wait $my_pid
# The variable $? always holds the exit code of the last command to finish.
# Here it holds the exit code of $my_pid, since wait exits with that code.
my_status=$?
echo The exit status of the process was $my_status
This is how I solved it when I had a similar need:
# Some function that takes a long time to process
longprocess() {
# Sleep up to 14 seconds
sleep $((RANDOM % 15))
# Randomly exit with 0 or 1
exit $((RANDOM % 2))
}
pids=""
# Run five concurrent processes
for i in {1..5}; do
( longprocess ) &
# store PID of process
pids+=" $!"
done
# Wait for all processes to finish, will take max 14s
# as it waits in order of launch, not order of finishing
for p in $pids; do
if wait $p; then
echo "Process $p success"
else
echo "Process $p fail"
fi
done
The pid of a backgrounded child process is stored in $!.
You can store all child processes' pids into an array, e.g. PIDS[].
wait [-n] [jobspec or pid …]
Wait until the child process specified by each process ID pid or job specification jobspec exits and return the exit status of the last command waited for. If a job spec is given, all processes in the job are waited for. If no arguments are given, all currently active child processes are waited for, and the return status is zero. If the -n option is supplied, wait waits for any job to terminate and returns its exit status. If neither jobspec nor pid specifies an active child process of the shell, the return status is 127.
Use wait command you can wait for all child processes finish, meanwhile you can get exit status of each child processes via $? and store status into STATUS[]. Then you can do something depending by status.
I have tried the following 2 solutions and they run well. solution01 is
more concise, while solution02 is a little complicated.
solution01
#!/bin/bash
# start 3 child processes concurrently, and store each pid into array PIDS[].
process=(a.sh b.sh c.sh)
for app in ${process[#]}; do
./${app} &
PIDS+=($!)
done
# wait for all processes to finish, and store each process's exit code into array STATUS[].
for pid in ${PIDS[#]}; do
echo "pid=${pid}"
wait ${pid}
STATUS+=($?)
done
# after all processed finish, check their exit codes in STATUS[].
i=0
for st in ${STATUS[#]}; do
if [[ ${st} -ne 0 ]]; then
echo "$i failed"
else
echo "$i finish"
fi
((i+=1))
done
solution02
#!/bin/bash
# start 3 child processes concurrently, and store each pid into array PIDS[].
i=0
process=(a.sh b.sh c.sh)
for app in ${process[#]}; do
./${app} &
pid=$!
PIDS[$i]=${pid}
((i+=1))
done
# wait for all processes to finish, and store each process's exit code into array STATUS[].
i=0
for pid in ${PIDS[#]}; do
echo "pid=${pid}"
wait ${pid}
STATUS[$i]=$?
((i+=1))
done
# after all processed finish, check their exit codes in STATUS[].
i=0
for st in ${STATUS[#]}; do
if [[ ${st} -ne 0 ]]; then
echo "$i failed"
else
echo "$i finish"
fi
((i+=1))
done
As I see almost all answers use external utilities (mostly ps) to poll the state of the background process. There is a more unixesh solution, catching the SIGCHLD signal. In the signal handler it has to be checked which child process was stopped. It can be done by kill -0 <PID> built-in (universal) or checking the existence of /proc/<PID> directory (Linux specific) or using the jobs built-in (bash specific. jobs -l also reports the pid. In this case the 3rd field of the output can be Stopped|Running|Done|Exit . ).
Here is my example.
The launched process is called loop.sh. It accepts -x or a number as an argument. For -x is exits with exit code 1. For a number it waits num*5 seconds. In every 5 seconds it prints its PID.
The launcher process is called launch.sh:
#!/bin/bash
handle_chld() {
local tmp=()
for((i=0;i<${#pids[#]};++i)); do
if [ ! -d /proc/${pids[i]} ]; then
wait ${pids[i]}
echo "Stopped ${pids[i]}; exit code: $?"
else tmp+=(${pids[i]})
fi
done
pids=(${tmp[#]})
}
set -o monitor
trap "handle_chld" CHLD
# Start background processes
./loop.sh 3 &
pids+=($!)
./loop.sh 2 &
pids+=($!)
./loop.sh -x &
pids+=($!)
# Wait until all background processes are stopped
while [ ${#pids[#]} -gt 0 ]; do echo "WAITING FOR: ${pids[#]}"; sleep 2; done
echo STOPPED
For more explanation see: Starting a process from bash script failed
#/bin/bash
#pgm to monitor
tail -f /var/log/messages >> /tmp/log&
# background cmd pid
pid=$!
# loop to monitor running background cmd
while :
do
ps ax | grep $pid | grep -v grep
ret=$?
if test "$ret" != "0"
then
echo "Monitored pid ended"
break
fi
sleep 5
done
wait $pid
echo $?
I would change your approach slightly. Rather than checking every few seconds if the command is still alive and reporting a message, have another process that reports every few seconds that the command is still running and then kill that process when the command finishes. For example:
#!/bin/sh
cmd() { sleep 5; exit 24; }
cmd & # Run the long running process
pid=$! # Record the pid
# Spawn a process that coninually reports that the command is still running
while echo "$(date): $pid is still running"; do sleep 1; done &
echoer=$!
# Set a trap to kill the reporter when the process finishes
trap 'kill $echoer' 0
# Wait for the process to finish
if wait $pid; then
echo "cmd succeeded"
else
echo "cmd FAILED!! (returned $?)"
fi
Our team had the same need with a remote SSH-executed script which was timing out after 25 minutes of inactivity. Here is a solution with the monitoring loop checking the background process every second, but printing only every 10 minutes to suppress an inactivity timeout.
long_running.sh &
pid=$!
# Wait on a background job completion. Query status every 10 minutes.
declare -i elapsed=0
# `ps -p ${pid}` works on macOS and CentOS. On both OSes `ps ${pid}` works as well.
while ps -p ${pid} >/dev/null; do
sleep 1
if ((++elapsed % 600 == 0)); then
echo "Waiting for the completion of the main script. $((elapsed / 60))m and counting ..."
fi
done
# Return the exit code of the terminated background process. This works in Bash 4.4 despite what Bash docs say:
# "If neither jobspec nor pid specifies an active child process of the shell, the return status is 127."
wait ${pid}
A simple example, similar to the solutions above. This doesn't require monitoring any process output. The next example uses tail to follow output.
$ echo '#!/bin/bash' > tmp.sh
$ echo 'sleep 30; exit 5' >> tmp.sh
$ chmod +x tmp.sh
$ ./tmp.sh &
[1] 7454
$ pid=$!
$ wait $pid
[1]+ Exit 5 ./tmp.sh
$ echo $?
5
Use tail to follow process output and quit when the process is complete.
$ echo '#!/bin/bash' > tmp.sh
$ echo 'i=0; while let "$i < 10"; do sleep 5; echo "$i"; let i=$i+1; done; exit 5;' >> tmp.sh
$ chmod +x tmp.sh
$ ./tmp.sh
0
1
2
^C
$ ./tmp.sh > /tmp/tmp.log 2>&1 &
[1] 7673
$ pid=$!
$ tail -f --pid $pid /tmp/tmp.log
0
1
2
3
4
5
6
7
8
9
[1]+ Exit 5 ./tmp.sh > /tmp/tmp.log 2>&1
$ wait $pid
$ echo $?
5
Another solution is to monitor processes via the proc filesystem (safer than ps/grep combo); when you start a process it has a corresponding folder in /proc/$pid, so the solution could be
#!/bin/bash
....
doSomething &
local pid=$!
while [ -d /proc/$pid ]; do # While directory exists, the process is running
doSomethingElse
....
else # when directory is removed from /proc, process has ended
wait $pid
local exit_status=$?
done
....
Now you can use the $exit_status variable however you like.
With this method, your script doesnt have to wait for the background process, you will only have to monitor a temporary file for the exit status.
FUNCmyCmd() { sleep 3;return 6; };
export retFile=$(mktemp);
FUNCexecAndWait() { FUNCmyCmd;echo $? >$retFile; };
FUNCexecAndWait&
now, your script can do anything else while you just have to keep monitoring the contents of retFile (it can also contain any other information you want like the exit time).
PS.: btw, I coded thinking in bash
My solution was to use an anonymous pipe to pass the status to a monitoring loop. There are no temporary files used to exchange status so nothing to cleanup. If you were uncertain about the number of background jobs the break condition could be [ -z "$(jobs -p)" ].
#!/bin/bash
exec 3<> <(:)
{ sleep 15 ; echo "sleep/exit $?" >&3 ; } &
while read -u 3 -t 1 -r STAT CODE || STAT="timeout" ; do
echo "stat: ${STAT}; code: ${CODE}"
if [ "${STAT}" = "sleep/exit" ] ; then
break
fi
done
how about ...
# run your stuff
unset PID
for process in one two three four
do
( sleep $((RANDOM%20)); echo hello from process $process; exit $((RANDOM%3)); ) & 2>&1
PID+=($!)
done
# (optional) report on the status of that stuff as it exits
for pid in "${PID[#]}"
do
( wait "$pid"; echo "process $pid complemted with exit status $?") &
done
# (optional) while we wait, monitor that stuff
while ps --pid "${PID[*]}" --ppid "${PID[*]}" --format pid,ppid,command,pcpu
do
sleep 5
done | xargs -i date '+%x %X {}'
# return non-zero if any are non zero
SUCCESS=0
for pid in "${PID[#]}"
do
wait "$pid" && ((SUCCESS++)) && echo "$pid OK" || echo "$pid returned $?"
done
echo "success for $SUCCESS out of ${#PID} jobs"
exit $(( ${#PID} - SUCCESS ))
This may be extending beyond your question, however if you're concerned about the length of time processes are running for, you may be interested in checking the status of running background processes after an interval of time. It's easy enough to check which child PIDs are still running using pgrep -P $$, however I came up with the following solution to check the exit status of those PIDs that have already expired:
cmd1() { sleep 5; exit 24; }
cmd2() { sleep 10; exit 0; }
pids=()
cmd1 & pids+=("$!")
cmd2 & pids+=("$!")
lasttimeout=0
for timeout in 2 7 11; do
echo -n "interval-$timeout: "
sleep $((timeout-lasttimeout))
# you can only wait on a pid once
remainingpids=()
for pid in ${pids[*]}; do
if ! ps -p $pid >/dev/null ; then
wait $pid
echo -n "pid-$pid:exited($?); "
else
echo -n "pid-$pid:running; "
remainingpids+=("$pid")
fi
done
pids=( ${remainingpids[*]} )
lasttimeout=$timeout
echo
done
which outputs:
interval-2: pid-28083:running; pid-28084:running;
interval-7: pid-28083:exited(24); pid-28084:running;
interval-11: pid-28084:exited(0);
Note: You could change $pids to a string variable rather than array to simplify things if you like.

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