Why won't cron execute this mysql routine properly? - cron

I have a cron job set up
0 0 * * * /usr/bin/mysqldump -u omeka_admin -h localhost omeka > /home/groups/omeka/database/omeka.sql > /dev/null
Pass is stored in .my.cnf. It works great from the command line but everytime cron executes it, the resulting file is size zero
I tried putting in the pass, but got the same result. Again, it works great from the command line. Just in case there was some weird process going that interfered with the output but it's still not working
Any idea of what's going on?

Remove last redirection
... omeka > /home/groups/omeka/database/omeka.sql
or redirect stderr
... omeka > /home/groups/omeka/database/omeka.sql 2> /dev/null

Related

Cronjob stuck without exiting

I have 50+ cronjobs like the one given below running in my Centos 7 server.
curl -s https://url.com/file.php
This runs every 10 minutes. When running manually from the shell it only takes 1-2 minutes. It also is working fine using cronjob. The problem is that it does not exit after the execution. When i check my processes using ps command, it shows many cronjobs of previous dates(even 10 days before) which accumulates the total proccesses in my server.
Line in crontab :-
*/10 * * * * user curl -s https://url.com/file.php > /dev/null 2>&1
Is there any reasion for this? If i rememmber correctly this happened after latest patch update.
Please help.
Modify your command to store the logs in log files instead of dumping it to /dev/null.
Options
--max-time
--connect-timeout
--retry
--retry-max-time
can be used to control the curl command behaviour.

Cron not executing the shell script + Linux [duplicate]

I have a script that checks if the PPTP VPN is running, and if not it reconnects the PPTP VPN. When I run the script manually it executes fine, but when I make a cron job, it's not running.
* * * * * /bin/bash /var/scripts/vpn-check.sh
Here is the script:
#!/bin/sh
/bin/ping -c3 192.168.17.27 > /tmp/pingreport
result=`grep "0 received" /tmp/pingreport`
truncresult="`echo "$result" | sed 's/^\(.................................\).*$$'`"
if [[ $truncresult == "3 packets transmitted, 0 received" ]]; then
/usr/sbin/pppd call home
fi
finally i found a solution ... instead of entering the cronjob with
crontab -e
i needed to edit the crontab file directly
nano /etc/crontab
adding e.g. something like
*/5 * * * * root /bin/bash /var/scripts/vpn-check.sh
and its fine now!
Thank you all for your help ... hope my solution will help other people as well.
After a long time getting errors, I just did this:
SHELL=/bin/bash
PATH=/bin:/sbin:/usr/bin:/usr/sbin
* * * * * /bin/bash /home/joaovitordeon/Documentos/test.sh
Where test.sh contains:
#!/bin/bash
/usr/bin/python3 /home/joaovitordeon/Documentos/test.py;
In my case, the issue was that the script wasn't marked as executable. To make sure it is, run the following command:
chmod +x your_script.sh
If you're positive the script runs outside of cron, execute
printf "SHELL=$SHELL\nPATH=$PATH\n* * * * * /bin/bash /var/scripts/vpn-check.sh\n"
Do crontab -e for whichever crontab you're using and replace it with output of the above command. This should mirror most of your environment in case there is some missing path issue or something else. Also check logs for any errors it's getting.
Though it definitly looks like the script has an error or you messed something up when copying it here
sed: -e expression #1, char 44: unterminated `s' command
./bad.sh: 5: ./bad.sh: [[: not found
Simple alternate script
#!/bin/bash
if [[ $(ping -c3 192.168.17.27) == *"0 received"* ]]; then
/usr/sbin/pppd call home
fi
Your script can be corrected and simplified like this:
#!/bin/sh
log=/tmp/vpn-check.log
{ date; ping -c3 192.168.17.27; } > $log
if grep -q '0 received' $log; then
/usr/sbin/pppd call home >>$log 2>&1
fi
Through our discussion in comments we confirmed that the script itself works, but pppd doesn't, when running from cron. This is because something must be different in an interactive shell like your terminal window, and in cron. This kind of problem is very common by the way.
The first thing to do is try to remember what configuration is necessary for pppd. I don't use it so I don't know. Maybe you need to set some environment variables? In which case most probably you set something in a startup file, like .bashrc, which is usually not used in a non-interactive shell, and would explain why pppd doesn't work.
The second thing is to check the logs of pppd. If you cannot find the logs easily, look into its man page, and it's configuration files, and try to find the logs, or how to make it log. Based on the logs, you should be able to find what is missing when running in cron, and resolve your problem.
Was having a similar problem that was resolved when a sh was put before the command in crontab
This did not work :
#reboot ~myhome/mycommand >/tmp/logfile 2>&1
This did :
#reboot sh ~myhome/mycommand >/tmp/logfile 2>&1
my case:
crontab -e
then adding the line:
* * * * * ( cd /directory/of/script/ && /bin/sh /directory/of/script/scriptItself.sh )
in fact, if I added "root" as per the user, it thought "root" was a command, and it didn't work.
As a complement of other's answers, didn't you forget the username in your crontab script ?
Try this :
* * * * * root /bin/bash /var/scripts/vpn-check.sh
EDIT
Here is a patch of your code
#!/bin/sh
/bin/ping -c3 192.168.17.27 > /tmp/pingreport
result=`grep "0 received" /tmp/pingreport`
truncresult=`echo "$result" | /bin/sed 's/^\(.................................\).*$/\1/'`
if [[ $truncresult == "3 packets transmitted, 0 received" ]]; then
/usr/sbin/pppd call home
fi
In my case, it could be solved by using this:
* * * * * root ( cd /directory/of/script/ && /directory/of/script/scriptItself.sh )
I used some ./folder/-references in the script, which didn't work.
The problem statement is script is getting executed when run manually in the shell but when run through cron, it gives "java: command not found" error -
Please try below 2 options and it should fix the issue -
Ensure the script is executable .If it's not, execute below -
chmod a+x your_script_name.sh
The cron job doesn’t run with the same user with which you are executing the script manually - so it doesn't have access to the same $PATH variable as your user which means it can't locate the Java executable to execute the commands in the script. We should first fetch the value of PATH variable as below and then set it(export) in the script -
echo $PATH can be used to fetch the value of PATH variable.
and your script can be modified as below - Please see second line starting with export
#!/bin/sh
export PATH=<provide the value of echo $PATH>
/bin/ping -c3 192.168.17.27 > /tmp/pingreport
result=`grep "0 received" /tmp/pingreport`
truncresult="`echo "$result" | sed 's/^\(.................................\).*$$'`"
if [[ $truncresult == "3 packets transmitted, 0 received" ]]; then
/usr/sbin/pppd call home
fi
First of all, check if cron service is running. You know the first question of the IT helpdesk: "Is the PC plugged in?".
For me, this was happening because the cronjob was executing from /root directory but my shell script (a script to pull the latest code from GitHub and run the tests) were in a different directory. So, I had to edit my script to have a cd to my scripts folder. My debug steps were
Verified that my script run independent of cron job
Checked /var/log/cron to see if the cron jobs are running. Verified that the job is running at the intended time
Added an echo command to the script to log the start and end times to a file. Verified that those were getting logged but not the actual commands
Logged the result of pwd to the same file and saw that the commands were getting executed from /root
Tried adding a cd to my script directory as the first line in the script. When the cron job kicked off this time, the script got executed just like in step 1.
it was timezone in my case. I scheduled cron with my local time but server has different timezone and it does not run at all. so make sure your server has same time by date cmd
first run command env > env.tmp
then run cat env.tmp
copy PATH=.................. Full line and paste into crontab -e, line before your cronjobs.
try this
/home/your site folder name/public_html/gistfile1.sh
set cron path like above

Active cron job

I am trying to make a cron job for the first time but i have some problems making it work.
Here is what i have done so far:
Linux commands:
crontab -e
My cronjob looks like this:
1 * * * * wget -qO /dev/null http://mySite/myController/myView
Now when i look in:
/var/spool/cron/crontabs/
I get the following output:
marc root
if i open the file root
i see my cronjob (the one above)
However it doesnt seem like it is running.
is there a way i can check if its running or make sure that it is running?
By default cron jobs do have a log file. It should be in /var/log/syslog (depends on your system). Vouch for it and you're done. Else you can simply append the output to a log file manually by
1 * * * * wget http://mySite/myController/myView >> ~/my_log_file.txt
and see what's your output. Notice I've changed removed the quiet parameter from wget command so that there is some output.

Linux cronjob doesn't work (execute script)

I created a cronjob with the command crontab -e:
*/1 * * * * /var/lib/tomcat/webapps/ROOT/WEB-INF/scripts/test.sh
This file test.sh should be executed every minute. But it doesn't work.
If I run the script manually it works fine. So I think the problem is the cronjob not the script ;)
Are there any permissions or something else which block the cronjob?
Is the cronjob syntax correct?
Thx
For a start, you don't need the /1 if you want it done every minute. Just setting the minute field to * will do.
Next, you should place, as the first lines in your test script (though after the #! line if it's there):
env >/tmp/test.sh.dummy
set >>/tmp/test.sh.dummy
and see if that file shows up.
That will tell you if the script is running or not.
If it's not running, check to make sure cron itself is running:
pax> ps -ef | grep cron | grep -v grep
root 1048 1 0 08:45 ? 00:00:00 cron
(mine is).
If it is running, the most likely problem is that the environment under which cron runs your jobs is nowhere near the environment your shell gives you. Examine the differences between what was output to your /tmp/test.sh.dummy file and what your shell gives your when you execute env ; set.

Shell script to log server checks runs manually, but not from cron

I'm using a basic shell script to log the results of top, netstat, ps and free every minute.
This is the script:
/scripts/logtop:
TERM=vt100
export TERM
time=$(date)
min=${time:14:2}
top -b -n 1 > /var/log/systemCheckLogs/$min
netstat -an >> /var/log/systemCheckLogs/$min
ps aux >> /var/log/systemCheckLogs/$min
free >> /var/log/systemCheckLogs/$min
echo "Message Content: $min" | mail -s "Ran System Check script" email#domain.com
exit 0
When I run this script directly it works fine. It creates the files and puts them in /var/log/systemCheckLogs/ and then sends me an email.
I can't, however, get it to work when trying to get cron to do it every minute.
I tried putting it in /var/spool/cron/root like so:
* * * * * /scripts/logtop > /dev/null 2>&1
and it never executes
I also tried putting it in /var/spool/cron/myservername and also like so:
* * * * * /scripts/logtop > /dev/null 2>&1
it'll run every minute, but nothing gets created in systemCheckLogs.
Is there a reason it works when I run it but not when cron runs it?
Also, here's what the permissions look like:
-rwxrwxrwx 1 root root 326 Jul 21 01:53 logtop
drwxr-xr-x 2 root root 4096 Jul 21 01:51 systemCheckLogs
Normally crontabs are kept in "/var/spool/cron/crontabs/". Also, normally, you update it with the crontab command as this HUPs crond after you're done and it'll make sure the file gets in the correct place.
Are you using the crontab command to create the cron entry? crontab to import a file directly. crontab -e to edit the current crontab with $EDITOR.
All jobs run by cron need the interpreter listed at the top, so cron knows how to run them.
I can't tell if you just omitted that line or if it is not in your script.
For example,
#!/bin/bash
echo "Test cron jon"
When running from /var/spool/cron/root, it may be failing because cron is not configured to run for root. On linux, root cron jobs are typically run from /etc/crontab rather than from /var/spool/cron.
When running from /var/spool/cron/myservername, you probably have a permissions problem. Don't redirect the error to /dev/null -- capture them and examine.
Something else to be aware of, cron doesn't initialize the full run environment, which can sometimes mean you can run it just fine from a fully logged-in shell, but it doesn't behave the same from cron.
In the case of above, you don't have a "#!/bin/shell" up top in your script. If root is configured to use something like a regular bourne shell or cshell, the syntax you use to populate your variables will not work. This would explain why it would run, but not populate your files. So if you need it to be ksh, "#!/bin/ksh". It's generally best not to trust the environment to keep these things sane. If you need your profile run the do a ". ~/.profile" up front as well. Or a quick and dirty way to get your relatively full env is to do it from su as such "* * * * * su - root -c "/path/to/script" > /dev/null 2>&1
Just some things I've picked up over the years. You're definitely expecting a ksh based on your syntax, so you might want to be sure it's using it.
Thanks for the tips... used a little bit of each answer to get to the bottom of this.
I did have the interpreter at the top (wasn't shown here), but may have been wrong.
Am using #!/bin/bash now and that works.
Also had to tinker with the permissions of the directory the log files are being dumped in to get things working.

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