Based on this post (I am using gnuplot gnuplot 4.6 patchlevel 1):
gnuplot: max and min values in a range
I am trying to use set yr [GPVAL_DATA_Y_MIN:GPVAL_DATA_Y_MAX] in my .pg script that plots data from this .dat file:
100 2
200 4
300 9
But I get:
undefined variable: GPVAL_DATA_Y_MIN
This is my script:
set terminal png
set output 'img.png'
set xlabel 'x-label'
set ylabel 'y-label'
set boxwidth 0.5
set style fill solid
set yrange [GPVAL_DATA_Y_MIN:GPVAL_DATA_Y_MAX]
plot 'sample.dat' with boxes title ""
Any ideas?
The gnuplot-defined variables are available only after a plot command (In the question you linked to, a replot is used to plot again).
Basically you have different options:
First plot to terminal unknown, and then change to the real terminal, set the range (now the variables are available), and replot:
set xlabel 'x-label'
set ylabel 'y-label'
set boxwidth 0.5 relative
set style fill solid
set terminal unknown
plot 'sample.dat' with boxes title ""
set terminal pngcairo
set output 'img.png'
set yrange [GPVAL_DATA_Y_MIN:GPVAL_DATA_Y_MAX]
replot
Note, that I used the pngcairo terminal, which gives much better results, than the png terminal. And I used set boxwidth 0.5 relative.
Use set autoscale to fix the ranges instead of setting an explicit yrange. You can use set offset to specify a margin based on the autoscaled values:
set autoscale yfix
# set offset 0,0,0.5,0.5
plot 'sample.dat' with boxes title ''
Use the stats command to extract the minimum and maximum values:
stats 'sample.dat' using 1:2
set yrange[STATS_min_y:STATS_max_y]
plot 'sample.dat' with boxes title ''
Related
my gnuplot script plot bar graphs in the following 2D format:
using the following sctipt:
set term pngcairo size 800,600
set termoption noenhanced
set title "$file_name" font "Century,22" textcolor "#b8860b"
set tics font "Helvetica,10"
#set xtics noenhanced
set ylabel "Fraction, %"
set xlabel "H-bond donor/aceptor, residue"
set yrange [0:1]
set ytics 0.1
set grid y
set key off
set boxwidth 0.9
set style fill solid 0.5
plot '<cat' using 2:xtic(1) with boxes
In order to add values above the bars, I've tried to modify it to
plot '<cat' using 0:2:xtic(1) with boxes, '' u 0:2:2 w labels offset 0,1
but the values were not added to the bars, with the following warning
"/dev/fd/63" line 17: warning: Skipping data file with no valid points
I can only test for Windows, but I assume cat under Linux is the equivalent for type under Windows.
So, what is your filename? I would say your filename is simply missing. Check help piped-data.
Something like the following should work:
plot '<cat myDataFile.dat' using 0:2:xtic(1) with boxes, '' u 0:2:2 w labels offset 0,1
But then, what is the difference to using directly the filename?
plot 'myDataFile.dat' using 0:2:xtic(1) with boxes, '' u 0:2:2 w labels offset 0,1
I plot a time-series of datas (images, throughput), using this:
set term postscript color eps enhanced 22
set encoding utf8
set output "tput.eps"
load "../styles.inc"
set size 1,0.6
set bmargin 4.5
set tmargin 2.5
set lmargin 9
set rmargin 8
set title "{/bold Images updated and generated network traffic}" offset 0,0
set ylabel "#Images" offset 0,0
set y2label "Throughput [GB/day]" offset -2,0
set ytics 0,100,800
set ytics nomirror
set y2tics 0,100,600
set y2tics nomirror
set xtics time
set format x '%d/%m/%Y'
set grid y
set yrange[0:800]
set y2range [0:]
set xtics rotate by 45 right font "Arial, 18" nomirror
set key vertical sample 1.0 maxrows 1 width -0.6 at graph 1,1.13 font "Arial, 18"
set datafile separator ","
plot "datecount_sorted.csv" using (timecolumn(1, "%Y-%m-%d")):($2) with lines ls 5001 title "Uploaded images",\
"datecount_sorted.csv" using (timecolumn(1, "%Y-%m-%d")):($3/(1024*1024*1024)) axis x1y2 ls 5002 title "Upload Throughput",\
!epstopdf "tput.eps"
!rm "tput.eps"
quit
The input data looks like this:
2016-04-12,1,0
2016-05-02,2,0
2016-05-05,2,0
2016-05-06,1,0
2016-05-11,2,0
2016-05-13,3,0
2016-05-25,2,0
2016-06-01,3,541204241
2016-06-06,1,0
2016-06-13,1,471311979
2016-06-14,1,6329289
2016-06-17,1,137972881
2016-06-24,1,319050239
2016-06-27,1,138193384
The output is correct, it looks like this:
The problem is that when I try to set an xrange, the plot breaks completely (does not render).
This syntax in particular seems to be wrong:
set xrange ["2020-01-01":"2020-06-17"]
And similarly wrong is the one using the same timefmt that is used in the plot:
set xrange ["01/01/2020":"17/06/2020"]
So..what is the correct syntax ?
What you are missing is set xdata time and set timefmt <format string> to tell gnuplot how read the dates from the data, the xrange is set using the format specified in timefmt, which doesn't have to be the same as the format you give to the axis, the plot breaks because it can't decode the dates from the xrange.
In your case adding this should suffice
set xdata time
set timefmt "%Y/%m/%d"
I tested it with set xrange ["2016/04/12":"2016/05/03"] on the example data file you posted.
You must explicitely parse the time strings passed to the range settings:
set xtics time
FMT="%Y-%m-%d"
set format x "%d/%m/%Y"
set xrange [strptime(FMT, "2016-01-01"):strptime(FMT, "2016-06-17")]
set datafile separator commna
plot "datecount_sorted.csv" using (timecolumn(1, FMT)):2 with lines title "Uploaded images"
Following the great info on splot pm3d I want to create two color / contour plots with same color range.
Below code creates two plots. The way the data comes in the first data set has z-data 2.0 to 5.5. The second 1.5 to 5.5. I would like both plots to use and show the same color key scale for both for better comparison. (i.e. 2 to 6)
I tried using zrange but it did not work.
#- BASE ---------------------------------------------
reset
#set zrange [2:6]
set contour
unset surface
set cntrparam levels incr 2.0,0.5,8.0
set view map
set xrange [0:2184]
set yrange [0:1472]
set dgrid3d 100,100,4
set table "ap130_base_contour.txt"
splot 'ap130_base.dat' using 11:12:14
unset table
unset contour
set surface
set table "ap130_base_dgrid.txt"
splot 'ap130_base.dat' using 11:12:14
unset table
reset
set pm3d map
unset key
set palette defined (0 '#352a87', 1 '#0363e1',2 '#1485d4', 3 '#06a7c6', 4 '#38b99e', 5 '#92bf73', 6 '#d9ba56', 7 '#fcce2e', 8 '#f9fb0e')
set autoscale fix
set grid
set terminal png size 2184,1472 enhanced font "Helvetica,20"
set output 'ap130_base.png'
splot 'ap130_base_dgrid.txt' w pm3d, 'ap130_base_contour.txt' w l lc rgb "black"
set output
set terminal X11
#- TSFF ---------------------------------------------
reset
#set zrange [2:6]
set contour
unset surface
set cntrparam levels incr 2.0,0.5,8.0
set view map
set xrange [0:2184]
set yrange [0:1472]
set dgrid3d 100,100,4
set table "ap130_tsff_contour.txt"
splot 'ap130_tsff.dat' using 11:12:14
unset table
unset contour
set surface
set table "ap130_tsff_dgrid.txt"
splot 'ap130_tsff.dat' using 11:12:14
unset table
reset
set pm3d map
unset key
set palette defined (0 '#352a87', 1 '#0363e1',2 '#1485d4', 3 '#06a7c6', 4 '#38b99e', 5 '#92bf73', 6 '#d9ba56', 7 '#fcce2e', 8 '#f9fb0e')
set autoscale fix
set grid
set terminal png size 2184,1472 enhanced font "Helvetica,20"
set output 'ap130_tsff.png'
splot 'ap130_tsff_dgrid.txt' w pm3d, 'ap130_tsff_contour.txt' w l lc rgb "black"
set output
set terminal X11
Note the color scale i the first plot from 2.0 to 5.5
In the second plot from 1.5 to 5.5
I would like both plots to have a color scale from i.e. 1 to 6.
Your input is appreciated.
Gert
Try
set zrange[2:6]
set cbrange[2:6]
It should do the trick.
I have problems changing the font size of my ytics (xtics as well) in an epslatex gnuplot.
I tried set format y '\tiny{%g}'
It is only working for the first of the two plots.
This is my code:
set terminal epslatex
set output "w_alt_nsyB_multi.tex"
set multiplot layout 1,1
set xrange [-0.5:17]
set yrange [0:110]
set xlabel "days"
set ylabel "Survival (\\%)" offset 2.5
set key reverse
set xtics font 'Arial,4' s
et style histogram errorbars gap 2 lw 1
set style data histogram
set style fill solid 1 border lt -1
set boxwidth 0.8
plot 'w_alt_nsyB.dat' every ::::7 using 2:3:xticlabels(1) title 'w1118' lt rgb "#000000",\
'w_alt_nsyB.dat' every ::::7 using 4:5 title 'wtSYN' lt rgb "#FF0000",\
'w_alt_elav_endoG.dat' every ::::7 using 6:7 title '38085' lt rgb "#9400D3"
set origin 0.5, 0.25
set size 0.5, 0.5
set xrange [-0.5:6]
set yrange [0:110]
set xlabel "\\tiny{Time of $Mn^{2+}$ treatment}"
set ytics ('10'10,'50'50,'100'100) nomirror
unset border
set xtics nomirror
unset ylabel
unset key
plot 'w_alt_nsyB_100.dat' using 2:3:xticlabels(1) lt rgb "#000000",\
'w_alt_nsyB_100.dat' using 4:5:xticlabels(1) lt rgb "#FF0000",\
'w_alt_nsyB_100.dat' using 6:7:xticlabels(1) lt rgb "#9400D3"
unset multiplot
Can anyone help me please?
The format given in set format ... isn't applied if you give an explicit manual label like you do with
set ytics ('10'10,'50'50,'100'100)
You must either just give the locations of the labels
set format y '\tiny %g'
set ytics (10, 50, 100)
or include the font macro in every manual label
set ytics ('\tiny 10' 10, '\tiny 50' 50, '\tiny 100' 100)
Note also, that your syntax \tiny{%g} is wrong, \tiny is only a switch and doesn't take any arguments. In this case it doesn't matter, because every label is wrapped in an individual LaTeX box, but in other situations it makes a big difference. To wrap the tiny font you would usually need {\tiny %g}.
The same happens for the explicit labels which are set with xticlabel. Also here, the format from set format x doesn't apply. Instead of giving a column number to xticlabel (like xticlabel(1) in your example), you must give the complete label string including the macro:
xl(c) = sprintf('\tiny %s', strcol(c))
plot 'file.dat' using 2:3:xticlabel(xl(1))
Next time, please give a minimal example which allows others to reproduce your problem. We don't have your data files to run the script. And your problem isn't related to you specific data file, so you can as well construct an example using functions, which possibly leads you itself to the solution...
I'm trying to put two figures side by side using gnuplot with multiplot.
I want the resulting image to be rectangular so I use set size 2, 1. I also set the set multiplot layout 1, 2 option. However, the resulting image only uses the left part of the available space. Any help will be appreciated.
Thanks
Ahmet
Here is the resulting image
http://tinypic.com/r/33mlz04/6
And below is the gnuplot commands I'm using.
set terminal postscript eps color enhanced
set output 'figure.eps';
set size 2,1;
set multiplot layout 1, 2 ;
set title "Figure 1";
plot "data1.txt"
set title "Figure 1";
plot "data2.txt"
unset multiplot
Although I'm not very sure, with some trial and error I have solved it
set terminal postscript eps color enhanced
set output 'eps/image.eps';
set size 1,0.5;
set multiplot layout 1, 2 ;
set title "Figure 1";
set size 0.5,0.5;
plot "data/data1.txt"
set title "Figure 1";
set size 0.5,0.5;
plot "data/data2.txt"
unset multiplot
Try something like:
set terminal postscript eps color enhanced size 10,5
set output 'figure.eps';
set multiplot layout 1, 2 ;
set title "Figure 1";
plot "data1.txt"
set title "Figure 1";
plot "data2.txt"
unset multiplot
When you set the size on the terminal specification line, that determines the actual size of the plot canvas (in inches in this case). When you use set size on a separate line, that sets the size of the plot in relative units of the canvas size. This is different in older versions of gnuplot. For perhaps a better explanation, try help set size in gnuplot.
For even more control over the size/position of the plot, you can use set origin in conjuction with set size to change the placement and size of each plot. Finally, the most control can be achieved with set lmargin at <place> (and set rmargin ...) and so-on for tmargin and bmargin where the "lrtb" stand for left, right, top and bottom respectively.
So, to get a plot to fill all of the available space (left to right), you could:
set multiplot
set lmargin at 0
set rmargin at .5
plot sin(x)
set lmargin at .5
set rmargin at 1
plot cos(x)
unset multiplot
However, this is (usually) overkill. Usually gnuplot tries to make the margins big enough for your labels and such, but setting the margin explicitly disables that. I would suggest you go with the solution by andyras.
if you are having problems using this method for more than 2 figures add 'set origin 0,0' after 'set size 0.5,0.5'.
For example, for three figures :
set terminal postscript eps color enhanced
set output 'eps/image.eps';
set size 1.5,0.5;
set multiplot layout 1, 3 ;
set title "Figure 1";
set size 0.5,0.5;
set origin 0,0
plot "data/data1.txt"
set title "Figure 2";
set size 0.5,0.5;
set origin 0,0
plot "data/data3.txt"
set title "Figure 3";
set size 0.5,0.5;
set origin 0,0
plot "data/data3.txt"
unset multiplot