Multilabel text classification with BERT and highly imbalanced training data - pytorch

I'm trying to train a multilabel text classification model using BERT. Each piece of text can belong to 0 or more of a total of 485 classes. My model consists of a dropout layer and a linear layer added on top of the pooled output from the bert-base-uncased model from Hugging Face. The loss function I'm using is the BCEWithLogitsLoss in PyTorch.
I have millions of labeled observations to train on. But the training data are highly unbalanced, with some labels appearing in less than 10 observations and others appearing in more than 100K observations! I'd like to get a "good" recall.
My first attempt at training without adjusting for data imbalance produced a micro recall rate of 70% (good enough) but a macro recall rate of 45% (not good enough). These numbers indicate that the model isn't performing well on underrepresented classes.
How can I effectively adjust for the data imbalance during training to improve the macro recall rate? I see we can provide label weights to BCEWithLogitsLoss loss function. But given the very high imbalance in my data leading to weights in the range of 1 to 1M, can I actually get the model to converge? My initial experiments show that a weighted loss function is going up and down during training.
Alternatively, is there a better approach than using BERT + dropout + linear layer for this type of task?

In your case it might be helpful to balance the labels in the training data. You have a lot of data, so you could afford to loose a part of it by balancing. But before you do this, I recommend to read this answer about balancing classes in traing data.
If you really only care about recall, you could try to tune your model maximizing recall.

Related

What is the proper to save the fitted CNN model for MNIST dataset?

I develpoed a simple CNN model for MNIST dataset and i got 98% validation accuracy. But after saving the model through keras as model.h5 and evaluating the inference of th saved model in another jypyter session, the performance of the model is poor and the predictions are random
What needs to be done to get same accuracy after saving and uploading the model in different jypyter notebook session?
(Consider sharing your code/results so the community can help you better).
I'm assuming you're using Tensorflow/Keras, so model.save('my_model.h5') after your model.fit(...) should save the model, including the trained parameters (but not including the internal optimizer data; i.e gradients, etc..., which shouldn't affect the prediction capabilities of the model).
A number of things could cause a generalization gap like that, but...
Case 1: having a high training/validation accuracy and a low test (prediction) accuracy typically means your model overfit on the given training data.
I suggest adding some regularization to your training phase (dropout layers, cutout augmentation, L1/L2, etc...), a fewer number of epochs or early-stopping, or cross-validation/data reshuffle to cross off the possibility of overfitting.
Case 2: low intrinsic dataset variance, but unless you're using a subset of MNIST, this is unlikely. Make sure you are properly splitting your training/validation/test sets.
Again, it could be a number of issues, but these are the most common cases for low model generalization. Post your code (specifying the architecture, optimizer, hyperparameters, data prepropcessing, and test data used) so the answers can be more relevant to your problem.

Data augmentation affects convergence speed

Data augmentation is surely a great regularization method, and it improves my accuracy on the unseen test set. However, I do not understand why it reduces the convergence speed of the network? I know each epoch takes a longer time to train since image transformations are applied on the fly. But why does it affect the convergence? For my current setup, the network hits a 100% training accuracy after 5 epochs without data augmentation (and clearly overfits) - with data augmentation, it takes 23 epochs to hit 95% training accuracy and never seems to hit 100%.
Any links to research papers or comments on the reasonings behind this?
I guess you are evaluating accuracy on the train set, right? And it is a mistake...
Without augmentation your network simply overfits. You have a predefined number of images, for instance, 1000, and your network during training can easily memorize dataset labels. And you are evaluating the model on the fixed (not augmented) dataset.
When you are training your network with data augmentation, basically, you are training a model on a dataset of infinite size. You are doing augmentation on the fly, which means that the model "sees" new images every time, and it cannot memorize them perfectly with 100% accuracy. And you are evaluating the model on the augmented (infinite) dataset.
When you train your model with and without augmentation, you evaluate it on the different datasets, so it is not correct to compare their accuracy.
Piece of advice:
Do not look at train set accuracy, it is simply misleading when you use augmentations. Instead - evaluate your model on the test set (or validation set), which is not augmented. By doing this - you'll see the real accuracy increase for your model.
P.S. If you want to find out more about image augmentaitons, I really recommend you to check this guide - https://notrocketscience.blog/complete-guide-to-data-augmentation-for-computer-vision/

Large dataset - ANN

I am trying to classify around 400K data with 13 attributes. I have used python sklearn's SVM package, but it didn't work, and then I learned that SVM's are not suitable for large dataset classification. Then I used the (sklearn) ANN using the following MLPClassifier:
MLPClassifier(solver='adam', alpha=1e-5, random_state=1,activation='relu', max_iter=500)
and trained the system using 200K samples, and tested the model on the remaining ones. The classification worked well. However, my concern is that the system is over trained or overfit. Can you please guide me on the number of hidden layers and node sizes to make sure that there is no overfit? (I have learned that the default implementation has 100 hidden neurons. Is it ok to use the default implementation as is?)
To know if your are overfitting you have to compute:
Training set accuracy
Test set accuracy
Once you have calculated this scores, compare it. If training set score is much better than your test set score, then you are overfitting. This means that your model is "memorizing" your data, instead of learning from it to make future predictions.
If you are overfitting with Neuronal Networks you probably have to reduce the number of layers and reduce the number of neurons per layer. There isn't any strict rule that says the number of layer or neurons you need depending on you dataset size. Every dataset can behaves completely different with the same dataset size.
So, to conclude, if you are overfitting, you would have to evaluate your model accuracy using different parameters of layers and number of neurons, and, then, observe with which values you obtain the best results. There are some methods you can use to find the best parameters, is like gridsearchCV.

Overfitting problem in convolutional neural Network and deciding the parameters of convolution and dence layer

I applied batch normalization technique to increase the accuracy of my cnn model.The accuracy of model without batch Normalization was only 46 % but after applying batch normalization it crossed 83% but a here arisen a bif overfitting problem that the model was giving validation Accuracy only 15%. Also please tell me how to decide no of filters strides in convolution layer and no of units in dence layer
Batch normalization has been shown to help in many cases but is not always optimal. I found that it depends where it resides in your model architecture and what you are trying to achieve. I have done a lot with different GAN CNNs and found that often BN is not needed and can even degrade performance. It's purpose is to help the model generalize faster but sometimes it increases training times. If I am trying to replicate images, I skip BN entirely. I don't understand what you mean with regards to the accuracy. Do you mean it achieved 83% accuracy with the training data but dropped to 15% accuracy on the validation data? What was the validation accuracy without the BN? In general, the validation accuracy is the more important metric. If you have a high training accuracy and a low validation accuracy, you are indeed overfitting. If you have several convolution layers, you may want to apply BN after each. If you still over-fit, try increasing your strides and kernel size. If that doesn't work you might need to look at the data again and make sure you have enough and that it is somewhat diverse. Assuming you are working with image data, are you creating samples where you rotate your images, crop them, etc. Consider synthetic data to augment your real data to help combat overfiiting.

How to improve validation accuracy in training convolutional neural network?

I am training a CNN model(made using Keras). Input image data has around 10200 images. There are 120 classes to be classified. Plotting the data frequency, I can see that sample data for every class is more or less uniform in terms of distribution.
Problem I am facing is loss plot for training data goes down with epochs but for validation data it first falls and then goes on increasing. Accuracy plot reflects this. Accuracy for training data finally settles down at .94 but for validation data its around 0.08.
Basically its case of over fitting.
I am using learning rate of 0.005 and dropout of .25.
What measures can I take to get better accuracy for validation? Is it possible that sample size for each class is too small and I may need data augmentation to have more data points?
Hard to say what could be the reason. First you can try classical regularization techniques like reducing the size of your model, adding dropout or l2/l1-regularizers to the layers. But this is more like randomly guessing the models hyperparameters and hoping for the best.
The scientific approach would be to look at the outputs for your model and try to understand why it produces these outputs and obviously checking your pipeline. Did you had a look at the outputs (are they all the same)? Did you preprocess the validation data the same way as the training data? Did you made a stratified train/test-split, i.e. keeping the class distribution the same in both sets? Is the data shuffles when you feed it to your model?
In the end you have about ~85 images per class which is really not a lot, compare CIFAR-10 resp. CIFAR-100 with 6000/600 images per class or ImageNet with 20k classes and 14M images (~500 images per class). So data augmentation could be beneficial as well.

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