Python script output need to save as a text file - python-3.x

import os ,fnmatch
import os.path
import os
file_dir= '/home/deeghayu/Desktop/mec_sim/up_folder'
file_type = ['*.py']
for root, dirs,files in os.walk( file_dir ):
for extension in ( tuple(file_type) ):
for filename in fnmatch.filter(files, extension):
filepath = os.path.join(root, filename)
if os.path.isfile( filepath ):
print(filename , 'executing...');
exec(open('/home/deeghayu/Desktop/mec_sim/up_folder/{}'.format(filename)).read())
else:
print('Execution failure!!!')
Hello everyone I am working on this code which execute a python file using a python code. I need to save my output of the code as a text file. Here I have shown my code. Can any one give me a solution how do I save my output into a text file?

Piggybacking off of the original answer since they are close but it isn't a best practice to open and close files that way.
It's better to use a context manager instead of saying f = open() since the context manager will handle closing the resource for you regardless of whether your code succeeds or not.
You use it like,
with open("file.txt","w+") as f:
for i in range(10):
f.write("This is line %d\r\n" % (i+1))

try
Open file
f= open("file.txt","w+")
Insert data into file
for i in range(10):
f.write("This is line %d\r\n" % (i+1))
Close the file
f.close()

Related

How to safely move a file to another directory in Python

The below works as expected:
import shutil
source = "c:\\mydir\myfile.txt"
dest_dir = "c:\\newdir"
shutil.move(source,dest_dir)
However, this also succeeds. I would want this to fail.
import shutil
source = "c:\\mydir"
dest_dir = "c:\\newdir"
shutil.move(source,dest_dir)
Any way to ensure that only a file is moved. Both Windows and Unix would be great. If not, Unix at least.
You could use pathlib's purepath.suffix to determine if a path points to a file or a directory, like so:
import pathlib
def points_to_file(path) -> bool:
if pathlib.PurePath(path).suffix:
return True
else:
return False
pathtodir = r'C:\Users\username'
pathtofile = r'C:\Users\username\filename.extension'
print (f'Does "{pathtodir}" point to a file? {points_to_file(pathtodir)}')
# Result -> Does "C:\Users\username" point to a file? False
print (f'Does "{pathtofile}" point to a file? {points_to_file(pathtofile)}')
# Result -> Does "C:\Users\username\filename.extension" point to a file? True
You can define a custom function to ensure that source is a file (with os.path.isfile function):
from os import path
def move_file(src, dst):
if not path.isfile(src):
raise IsADirectoryError('Source is not a file')
shutil.move(src, dst)

How to best manage file either gz or not?

Hi I wonder if there is a better way in terms of code readability and repetition.
I have a large file that do not fit in memory. The file is either compressed .gz or not.
If it is compressed I need to open it using gzip from standard lib.
I am not sure the code I ended up is the best way to deal with that situation.
import gzip
from Path import pathlib
def parse_open_file(openfile):
"""parse the content of the file"""
return
def parse_file(file_: Path):
if file.suffix == ".gz":
with gzip.open(file_, 'rb') as f:
parse_open_file(f)
else:
with open(file_, 'rb') as f:
parse_open_file(f)
One way to handle this is to assign either open or gzip.open to a variable, depending on file type, then use that as an 'alias' in the with statement. For example:
if file.suffix == ".gz":
myOpen = gzip.open
else:
myOpen = open
with myOpen(file_, 'rb') as f:
parse_open_file(f)

Dynamic file name in directory

I am able to write file in directory using python with following code.
How can I pass the dynamic file name in below code. Right now i am passing hard coded name -'abc.xml'. I have a for loop and file name will be different for each loop iteration. How can i open the directory and then write each file with different file name in it?
import os
if not os.path.exists(directory):
os.makedirs(directory)
with open(directory +"\\"+'abc.xml', 'wb') as file:
file.write(a.content)
Try formatting file name:
import os
if not os.path.exists(directory):
os.makedirs(directory)
for i in range(10):
with open(directory + "\\" + f'abc_{i}.xml', 'wb') as file:
file.write(a.content)
the simple way to get the filename as an argument is by using argv
sys.argv[0] - is the script name - python
sys.argv[1] - is the first argument to the scripts
so you can do the following:
with open(directory +"\\"+sys.argv[1] , 'wb') as file:
file.write(a.content)

Is there a method in Python to "check" if a textfile has been modified or appended? [duplicate]

I have a log file being written by another process which I want to watch for changes. Each time a change occurs I'd like to read the new data in to do some processing on it.
What's the best way to do this? I was hoping there'd be some sort of hook from the PyWin32 library. I've found the win32file.FindNextChangeNotification function but have no idea how to ask it to watch a specific file.
If anyone's done anything like this I'd be really grateful to hear how...
[Edit] I should have mentioned that I was after a solution that doesn't require polling.
[Edit] Curses! It seems this doesn't work over a mapped network drive. I'm guessing windows doesn't 'hear' any updates to the file the way it does on a local disk.
Did you try using Watchdog?
Python API library and shell utilities to monitor file system events.
Directory monitoring made easy with
A cross-platform API.
A shell tool to run commands in response to directory changes.
Get started quickly with a simple example in Quickstart...
If polling is good enough for you, I'd just watch if the "modified time" file stat changes. To read it:
os.stat(filename).st_mtime
(Also note that the Windows native change event solution does not work in all circumstances, e.g. on network drives.)
import os
class Monkey(object):
def __init__(self):
self._cached_stamp = 0
self.filename = '/path/to/file'
def ook(self):
stamp = os.stat(self.filename).st_mtime
if stamp != self._cached_stamp:
self._cached_stamp = stamp
# File has changed, so do something...
If you want a multiplatform solution, then check QFileSystemWatcher.
Here an example code (not sanitized):
from PyQt4 import QtCore
#QtCore.pyqtSlot(str)
def directory_changed(path):
print('Directory Changed!!!')
#QtCore.pyqtSlot(str)
def file_changed(path):
print('File Changed!!!')
fs_watcher = QtCore.QFileSystemWatcher(['/path/to/files_1', '/path/to/files_2', '/path/to/files_3'])
fs_watcher.connect(fs_watcher, QtCore.SIGNAL('directoryChanged(QString)'), directory_changed)
fs_watcher.connect(fs_watcher, QtCore.SIGNAL('fileChanged(QString)'), file_changed)
It should not work on windows (maybe with cygwin ?), but for unix user, you should use the "fcntl" system call. Here is an example in Python. It's mostly the same code if you need to write it in C (same function names)
import time
import fcntl
import os
import signal
FNAME = "/HOME/TOTO/FILETOWATCH"
def handler(signum, frame):
print "File %s modified" % (FNAME,)
signal.signal(signal.SIGIO, handler)
fd = os.open(FNAME, os.O_RDONLY)
fcntl.fcntl(fd, fcntl.F_SETSIG, 0)
fcntl.fcntl(fd, fcntl.F_NOTIFY,
fcntl.DN_MODIFY | fcntl.DN_CREATE | fcntl.DN_MULTISHOT)
while True:
time.sleep(10000)
Check out pyinotify.
inotify replaces dnotify (from an earlier answer) in newer linuxes and allows file-level rather than directory-level monitoring.
For watching a single file with polling, and minimal dependencies, here is a fully fleshed-out example, based on answer from Deestan (above):
import os
import sys
import time
class Watcher(object):
running = True
refresh_delay_secs = 1
# Constructor
def __init__(self, watch_file, call_func_on_change=None, *args, **kwargs):
self._cached_stamp = 0
self.filename = watch_file
self.call_func_on_change = call_func_on_change
self.args = args
self.kwargs = kwargs
# Look for changes
def look(self):
stamp = os.stat(self.filename).st_mtime
if stamp != self._cached_stamp:
self._cached_stamp = stamp
# File has changed, so do something...
print('File changed')
if self.call_func_on_change is not None:
self.call_func_on_change(*self.args, **self.kwargs)
# Keep watching in a loop
def watch(self):
while self.running:
try:
# Look for changes
time.sleep(self.refresh_delay_secs)
self.look()
except KeyboardInterrupt:
print('\nDone')
break
except FileNotFoundError:
# Action on file not found
pass
except:
print('Unhandled error: %s' % sys.exc_info()[0])
# Call this function each time a change happens
def custom_action(text):
print(text)
watch_file = 'my_file.txt'
# watcher = Watcher(watch_file) # simple
watcher = Watcher(watch_file, custom_action, text='yes, changed') # also call custom action function
watcher.watch() # start the watch going
Well after a bit of hacking of Tim Golden's script, I have the following which seems to work quite well:
import os
import win32file
import win32con
path_to_watch = "." # look at the current directory
file_to_watch = "test.txt" # look for changes to a file called test.txt
def ProcessNewData( newData ):
print "Text added: %s"%newData
# Set up the bits we'll need for output
ACTIONS = {
1 : "Created",
2 : "Deleted",
3 : "Updated",
4 : "Renamed from something",
5 : "Renamed to something"
}
FILE_LIST_DIRECTORY = 0x0001
hDir = win32file.CreateFile (
path_to_watch,
FILE_LIST_DIRECTORY,
win32con.FILE_SHARE_READ | win32con.FILE_SHARE_WRITE,
None,
win32con.OPEN_EXISTING,
win32con.FILE_FLAG_BACKUP_SEMANTICS,
None
)
# Open the file we're interested in
a = open(file_to_watch, "r")
# Throw away any exising log data
a.read()
# Wait for new data and call ProcessNewData for each new chunk that's written
while 1:
# Wait for a change to occur
results = win32file.ReadDirectoryChangesW (
hDir,
1024,
False,
win32con.FILE_NOTIFY_CHANGE_LAST_WRITE,
None,
None
)
# For each change, check to see if it's updating the file we're interested in
for action, file in results:
full_filename = os.path.join (path_to_watch, file)
#print file, ACTIONS.get (action, "Unknown")
if file == file_to_watch:
newText = a.read()
if newText != "":
ProcessNewData( newText )
It could probably do with a load more error checking, but for simply watching a log file and doing some processing on it before spitting it out to the screen, this works well.
Thanks everyone for your input - great stuff!
Check my answer to a similar question. You could try the same loop in Python. This page suggests:
import time
while 1:
where = file.tell()
line = file.readline()
if not line:
time.sleep(1)
file.seek(where)
else:
print line, # already has newline
Also see the question tail() a file with Python.
This is another modification of Tim Goldan's script that runs on unix types and adds a simple watcher for file modification by using a dict (file=>time).
usage: whateverName.py path_to_dir_to_watch
#!/usr/bin/env python
import os, sys, time
def files_to_timestamp(path):
files = [os.path.join(path, f) for f in os.listdir(path)]
return dict ([(f, os.path.getmtime(f)) for f in files])
if __name__ == "__main__":
path_to_watch = sys.argv[1]
print('Watching {}..'.format(path_to_watch))
before = files_to_timestamp(path_to_watch)
while 1:
time.sleep (2)
after = files_to_timestamp(path_to_watch)
added = [f for f in after.keys() if not f in before.keys()]
removed = [f for f in before.keys() if not f in after.keys()]
modified = []
for f in before.keys():
if not f in removed:
if os.path.getmtime(f) != before.get(f):
modified.append(f)
if added: print('Added: {}'.format(', '.join(added)))
if removed: print('Removed: {}'.format(', '.join(removed)))
if modified: print('Modified: {}'.format(', '.join(modified)))
before = after
Here is a simplified version of Kender's code that appears to do the same trick and does not import the entire file:
# Check file for new data.
import time
f = open(r'c:\temp\test.txt', 'r')
while True:
line = f.readline()
if not line:
time.sleep(1)
print 'Nothing New'
else:
print 'Call Function: ', line
Well, since you are using Python, you can just open a file and keep reading lines from it.
f = open('file.log')
If the line read is not empty, you process it.
line = f.readline()
if line:
// Do what you want with the line
You may be missing that it is ok to keep calling readline at the EOF. It will just keep returning an empty string in this case. And when something is appended to the log file, the reading will continue from where it stopped, as you need.
If you are looking for a solution that uses events, or a particular library, please specify this in your question. Otherwise, I think this solution is just fine.
Simplest solution for me is using watchdog's tool watchmedo
From https://pypi.python.org/pypi/watchdog I now have a process that looks up the sql files in a directory and executes them if necessary.
watchmedo shell-command \
--patterns="*.sql" \
--recursive \
--command='~/Desktop/load_files_into_mysql_database.sh' \
.
As you can see in Tim Golden's article, pointed by Horst Gutmann, WIN32 is relatively complex and watches directories, not a single file.
I'd like to suggest you look into IronPython, which is a .NET python implementation.
With IronPython you can use all the .NET functionality - including
System.IO.FileSystemWatcher
Which handles single files with a simple Event interface.
This is an example of checking a file for changes. One that may not be the best way of doing it, but it sure is a short way.
Handy tool for restarting application when changes have been made to the source. I made this when playing with pygame so I can see effects take place immediately after file save.
When used in pygame make sure the stuff in the 'while' loop is placed in your game loop aka update or whatever. Otherwise your application will get stuck in an infinite loop and you will not see your game updating.
file_size_stored = os.stat('neuron.py').st_size
while True:
try:
file_size_current = os.stat('neuron.py').st_size
if file_size_stored != file_size_current:
restart_program()
except:
pass
In case you wanted the restart code which I found on the web. Here it is. (Not relevant to the question, though it could come in handy)
def restart_program(): #restart application
python = sys.executable
os.execl(python, python, * sys.argv)
Have fun making electrons do what you want them to do.
Seems that no one has posted fswatch. It is a cross-platform file system watcher. Just install it, run it and follow the prompts.
I've used it with python and golang programs and it just works.
ACTIONS = {
1 : "Created",
2 : "Deleted",
3 : "Updated",
4 : "Renamed from something",
5 : "Renamed to something"
}
FILE_LIST_DIRECTORY = 0x0001
class myThread (threading.Thread):
def __init__(self, threadID, fileName, directory, origin):
threading.Thread.__init__(self)
self.threadID = threadID
self.fileName = fileName
self.daemon = True
self.dir = directory
self.originalFile = origin
def run(self):
startMonitor(self.fileName, self.dir, self.originalFile)
def startMonitor(fileMonitoring,dirPath,originalFile):
hDir = win32file.CreateFile (
dirPath,
FILE_LIST_DIRECTORY,
win32con.FILE_SHARE_READ | win32con.FILE_SHARE_WRITE,
None,
win32con.OPEN_EXISTING,
win32con.FILE_FLAG_BACKUP_SEMANTICS,
None
)
# Wait for new data and call ProcessNewData for each new chunk that's
# written
while 1:
# Wait for a change to occur
results = win32file.ReadDirectoryChangesW (
hDir,
1024,
False,
win32con.FILE_NOTIFY_CHANGE_LAST_WRITE,
None,
None
)
# For each change, check to see if it's updating the file we're
# interested in
for action, file_M in results:
full_filename = os.path.join (dirPath, file_M)
#print file, ACTIONS.get (action, "Unknown")
if len(full_filename) == len(fileMonitoring) and action == 3:
#copy to main file
...
Since I have it installed globally, my favorite approach is to use nodemon. If your source code is in src, and your entry point is src/app.py, then it's as easy as:
nodemon -w 'src/**' -e py,html --exec python src/app.py
... where -e py,html lets you control what file types to watch for changes.
Here's an example geared toward watching input files that write no more than one line per second but usually a lot less. The goal is to append the last line (most recent write) to the specified output file. I've copied this from one of my projects and just deleted all the irrelevant lines. You'll have to fill in or change the missing symbols.
from PyQt5.QtCore import QFileSystemWatcher, QSettings, QThread
from ui_main_window import Ui_MainWindow # Qt Creator gen'd
class MainWindow(QMainWindow, Ui_MainWindow):
def __init__(self, parent=None):
QMainWindow.__init__(self, parent)
Ui_MainWindow.__init__(self)
self._fileWatcher = QFileSystemWatcher()
self._fileWatcher.fileChanged.connect(self.fileChanged)
def fileChanged(self, filepath):
QThread.msleep(300) # Reqd on some machines, give chance for write to complete
# ^^ About to test this, may need more sophisticated solution
with open(filepath) as file:
lastLine = list(file)[-1]
destPath = self._filemap[filepath]['dest file']
with open(destPath, 'a') as out_file: # a= append
out_file.writelines([lastLine])
Of course, the encompassing QMainWindow class is not strictly required, ie. you can use QFileSystemWatcher alone.
Just to put this out there since no one mentioned it: there's a Python module in the Standard Library named filecmp which has this cmp() function that compares two files.
Just make sure you don't do from filecmp import cmp to not overshadow the built-in cmp() function in Python 2.x. That's okay in Python 3.x, though, since there's no such built-in cmp() function anymore.
Anyway, this is how its use looks like:
import filecmp
filecmp.cmp(path_to_file_1, path_to_file_2, shallow=True)
The argument shallow defaults to True. If the argument's value is True, then only the metadata of the files are compared; however, if the argument's value is False, then the contents of the files are compared.
Maybe this information will be useful to someone.
watchfiles (https://github.com/samuelcolvin/watchfiles) is a Python API and CLI that uses the Notify (https://github.com/notify-rs/notify) library written in Rust.
The rust implementation currently (2022-10-09) supports:
Linux / Android: inotify
macOS: FSEvents or kqueue, see features
Windows: ReadDirectoryChangesW
FreeBSD / NetBSD / OpenBSD / DragonflyBSD: kqueue
All platforms: polling
Binaries available on PyPI (https://pypi.org/project/watchfiles/) and conda-forge (https://github.com/conda-forge/watchfiles-feedstock).
You can also use a simple library called repyt, here is an example:
repyt ./app.py
related #4Oh4 solution a smooth change for a list of files to watch;
import os
import sys
import time
class Watcher(object):
running = True
refresh_delay_secs = 1
# Constructor
def __init__(self, watch_files, call_func_on_change=None, *args, **kwargs):
self._cached_stamp = 0
self._cached_stamp_files = {}
self.filenames = watch_files
self.call_func_on_change = call_func_on_change
self.args = args
self.kwargs = kwargs
# Look for changes
def look(self):
for file in self.filenames:
stamp = os.stat(file).st_mtime
if not file in self._cached_stamp_files:
self._cached_stamp_files[file] = 0
if stamp != self._cached_stamp_files[file]:
self._cached_stamp_files[file] = stamp
# File has changed, so do something...
file_to_read = open(file, 'r')
value = file_to_read.read()
print("value from file", value)
file_to_read.seek(0)
if self.call_func_on_change is not None:
self.call_func_on_change(*self.args, **self.kwargs)
# Keep watching in a loop
def watch(self):
while self.running:
try:
# Look for changes
time.sleep(self.refresh_delay_secs)
self.look()
except KeyboardInterrupt:
print('\nDone')
break
except FileNotFoundError:
# Action on file not found
pass
except Exception as e:
print(e)
print('Unhandled error: %s' % sys.exc_info()[0])
# Call this function each time a change happens
def custom_action(text):
print(text)
# pass
watch_files = ['/Users/mexekanez/my_file.txt', '/Users/mexekanez/my_file1.txt']
# watcher = Watcher(watch_file) # simple
if __name__ == "__main__":
watcher = Watcher(watch_files, custom_action, text='yes, changed') # also call custom action function
watcher.watch() # start the watch going
The best and simplest solution is to use pygtail:
https://pypi.python.org/pypi/pygtail
from pygtail import Pygtail
import sys
while True:
for line in Pygtail("some.log"):
sys.stdout.write(line)
import inotify.adapters
from datetime import datetime
LOG_FILE='/var/log/mysql/server_audit.log'
def main():
start_time = datetime.now()
while True:
i = inotify.adapters.Inotify()
i.add_watch(LOG_FILE)
for event in i.event_gen(yield_nones=False):
break
del i
with open(LOG_FILE, 'r') as f:
for line in f:
entry = line.split(',')
entry_time = datetime.strptime(entry[0],
'%Y%m%d %H:%M:%S')
if entry_time > start_time:
start_time = entry_time
print(entry)
if __name__ == '__main__':
main()
The easiest solution would get the two instances of the same file after an interval and Compare them. You Could try something like this
while True:
# Capturing the two instances models.py after certain interval of time
print("Looking for changes in " + app_name.capitalize() + " models.py\nPress 'CTRL + C' to stop the program")
with open(app_name.capitalize() + '/filename', 'r+') as app_models_file:
filename_content = app_models_file.read()
time.sleep(5)
with open(app_name.capitalize() + '/filename', 'r+') as app_models_file_1:
filename_content_1 = app_models_file_1.read()
# Comparing models.py after certain interval of time
if filename_content == filename_content_1:
pass
else:
print("You made a change in " + app_name.capitalize() + " filename.\n")
cmd = str(input("Do something with the file?(y/n):"))
if cmd == 'y':
# Do Something
elif cmd == 'n':
# pass or do something
else:
print("Invalid input")
If you're using windows, create this POLL.CMD file
#echo off
:top
xcopy /m /y %1 %2 | find /v "File(s) copied"
timeout /T 1 > nul
goto :top
then you can type "poll dir1 dir2" and it will copy all the files from dir1 to dir2 and check for updates once per second.
The "find" is optional, just to make the console less noisy.
This is not recursive. Maybe you could make it recursive using /e on the xcopy.
I don't know any Windows specific function. You could try getting the MD5 hash of the file every second/minute/hour (depends on how fast you need it) and compare it to the last hash. When it differs you know the file has been changed and you read out the newest lines.
I'd try something like this.
try:
f = open(filePath)
except IOError:
print "No such file: %s" % filePath
raw_input("Press Enter to close window")
try:
lines = f.readlines()
while True:
line = f.readline()
try:
if not line:
time.sleep(1)
else:
functionThatAnalisesTheLine(line)
except Exception, e:
# handle the exception somehow (for example, log the trace) and raise the same exception again
raw_input("Press Enter to close window")
raise e
finally:
f.close()
The loop checks if there is a new line(s) since last time file was read - if there is, it's read and passed to the functionThatAnalisesTheLine function. If not, script waits 1 second and retries the process.

search for a file with PYTHON without path

I have the following python-script, which open a text-file:
import sys
file = r"D:/...../text.txt"
with open (file,"r") as infile:
text = infile.read()
print (text)
If I want to run this script on another computer, i have to change the path (the same text-file "text.txt" will be saved on the other computer). Is there any way to let my script search the computer for the text-file without writing the path in the script?
Thank you.
Have you tried putting it in a relative directory, e.g.:
import sys
file = r"text.txt"
with open (file,"r") as infile:
text = infile.read()
print (text)
Just keeping the text file in the same directory as the small program.
You can use glob to get the result you want, but the glob will return a list of files, you may need to adapt your code.
Using a GUI for "choose file"
import sys
from Tkinter import *
import tkFileDialog
master = Tk()
master.withdraw() #hiding tkinter window
file_path = tkFileDialog.askopenfilename(title="Open file", filetypes=[("txt file",".txt"),("All files",".*")])
with open (file_path,"r") as infile:
text = infile.read()
print (text)

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