Converting spark-submit into Livy REST JSON protocol - apache-spark

Question

I am trying to rewrite spark-submit which has arguments like packages, repositories, jars, files, arguments defined by users like this into Livy REST JSON Protocol. please find more details below.
spark-submit command:
spark-submit \
--packages com.hortonworks.shc:shc-core:1.1.0.3.1.6.5-3 \
--repositories http://repo.hortonworks.com/content/groups/public/ \
--jars /usr/hdp/current/phoenix-client/phoenix-server.jar \
--files x/y.yml,x/y1.yml $HOME/spark_apps/a/app.py \
--arg_name value \
--arg_name2 value
what I tried in Livy :
{
"conf": {"com.hortonworks.shc": "shc-core:1.1.0.3.1.6.5-3"},
"jars":["wasbs:///phoenix-server.jar"],
"file": "/home/admin/spark_apps/a/app.py",
"files": ["/home/admin/x/y.yml,/home/admin/x/y1.yml"],
"args": [
"--arg_name=value",
"--arg_name=value"]
}
And the error is :
ls: cannot access '/usr/hdp/current/hadoop/lib': No such file or directory
log4j:ERROR Could not find value for key log4j.appender.tcp
log4j:ERROR Could not instantiate appender named "tcp".
Warning: Ignoring non-spark config property: com.hortonworks.shc=shc-core:1.1.0.3.1.6.5-3
Warning: Master yarn-cluster is deprecated since 2.0. Please use master "yarn" with specified deploy mode instead.
21/03/14 12:05:07 WARN NativeCodeLoader [main]: Unable to load native-hadoop library for your platform... using builtin-java classes where applicable
21/03/14 12:05:08 WARN DependencyUtils [main]: Skip remote jar wasbs:///phoenix-server.jar.
21/03/14 12:05:09 INFO RequestHedgingRMFailoverProxyProvider [main]: Created wrapped proxy for [rm1, rm2]
21/03/14 12:05:09 INFO RequestHedgingRMFailoverProxyProvider [main]: Looking for the active RM in [rm1, rm2]...
21/03/14 12:05:09 INFO RequestHedgingRMFailoverProxyProvider [main]: Found active RM [rm2]
21/03/14 12:05:09 INFO Client [main]: Requesting a new application from cluster with 2 NodeManagers
21/03/14 12:05:09 INFO Configuration [main]: found resource resource-types.xml at file:/etc/hadoop/4.1.2.5/0/resource-types.xml
21/03/14 12:05:09 INFO Client [main]: Verifying our application has not requested more than the maximum memory capability of the cluster (51200 MB per container)
21/03/14 12:05:09 INFO Client [main]: Will allocate AM container, with 1408 MB memory including 384 MB overhead
21/03/14 12:05:09 INFO Client [main]: Setting up container launch context for our AM
21/03/14 12:05:10 INFO Client [main]: Setting up the launch environment for our AM container
21/03/14 12:05:10 INFO Client [main]: Preparing resources for our AM container
21/03/14 12:05:10 INFO Client [main]: Falling back to uploading libraries in this host
21/03/14 12:05:10 INFO Client [main]: Uploading resource file:/tmp/spark-c923cab1-6cf5-4fa8-9db3-73d156052819/__hive_libs__5946923461629036475.zip -> wasbs://container-spark-2021-01-12t10-28-51-042z#container.blob.core.windows.net/user/livy/.sparkStaging/application_1615371594106_0446/__hive_libs__5946923461629036475.zip
21/03/14 12:05:12 INFO Client [main]: Source and destination file systems are the same. Not copying wasbs:/phoenix-server.jar
21/03/14 12:05:12 WARN AzureFileSystemThreadPoolExecutor [main]: Disabling threads for Delete operation as thread count 0 is <= 1
21/03/14 12:05:12 INFO AzureFileSystemThreadPoolExecutor [main]: Time taken for Delete operation is: 11 ms with threads: 0
21/03/14 12:05:12 INFO Client [main]: Deleted staging directory wasbs://container-2021-01-12t10-28-51-042z#container.blob.core.windows.net/user/livy/.sparkStaging/application_1615371594106_0446
Exception in thread "main" java.io.FileNotFoundException: wasbs://container-2021-01-12t10-28-51-042z#container.blob.core.windows.net/phoenix-server.jar: No such file or directory.
at org.apache.hadoop.fs.azure.NativeAzureFileSystem.getFileStatusInternal(NativeAzureFileSystem.java:2716)
at org.apache.hadoop.fs.azure.NativeAzureFileSystem.getFileStatus(NativeAzureFileSystem.java:2620)
at org.apache.spark.deploy.yarn.ClientDistributedCacheManager$$anonfun$1.apply(ClientDistributedCacheManager.scala:71)
at org.apache.spark.deploy.yarn.ClientDistributedCacheManager$$anonfun$1.apply(ClientDistributedCacheManager.scala:71)
at scala.collection.MapLike$class.getOrElse(MapLike.scala:128)
at scala.collection.AbstractMap.getOrElse(Map.scala:59)
at org.apache.spark.deploy.yarn.ClientDistributedCacheManager.addResource(ClientDistributedCacheManager.scala:71)
at org.apache.spark.deploy.yarn.Client.org$apache$spark$deploy$yarn$Client$$distribute$1(Client.scala:479)
at org.apache.spark.deploy.yarn.Client$$anonfun$prepareLocalResources$16$$anonfun$apply$6.apply(Client.scala:651)
at org.apache.spark.deploy.yarn.Client$$anonfun$prepareLocalResources$16$$anonfun$apply$6.apply(Client.scala:650)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.deploy.yarn.Client$$anonfun$prepareLocalResources$16.apply(Client.scala:650)
at org.apache.spark.deploy.yarn.Client$$anonfun$prepareLocalResources$16.apply(Client.scala:649)
at scala.collection.immutable.List.foreach(List.scala:392)
at org.apache.spark.deploy.yarn.Client.prepareLocalResources(Client.scala:649)
at org.apache.spark.deploy.yarn.Client.createContainerLaunchContext(Client.scala:917)
at org.apache.spark.deploy.yarn.Client.submitApplication(Client.scala:179)
at org.apache.spark.deploy.yarn.Client.run(Client.scala:1239)
at org.apache.spark.deploy.yarn.YarnClusterApplication.start(Client.scala:1634)
at org.apache.spark.deploy.SparkSubmit.org$apache$spark$deploy$SparkSubmit$$runMain(SparkSubmit.scala:858)
at org.apache.spark.deploy.SparkSubmit.doRunMain$1(SparkSubmit.scala:161)
at org.apache.spark.deploy.SparkSubmit.submit(SparkSubmit.scala:184)
at org.apache.spark.deploy.SparkSubmit.doSubmit(SparkSubmit.scala:86)
at org.apache.spark.deploy.SparkSubmit$$anon$2.doSubmit(SparkSubmit.scala:933)
at org.apache.spark.deploy.SparkSubmit$.main(SparkSubmit.scala:942)
at org.apache.spark.deploy.SparkSubmit.main(SparkSubmit.scala)
21/03/14 12:05:12 INFO ShutdownHookManager [shutdown-hook-0]: Shutdown hook called
21/03/14 12:05:12 INFO ShutdownHookManager [shutdown-hook-0]: Deleting directory /tmp/spark-c923cab1-6cf5-4fa8-9db3-73d156052819
21/03/14 12:05:12 INFO ShutdownHookManager [shutdown-hook-0]: Deleting directory /tmp/spark-424d5ba4-718c-470a-b110-9020578aef12
Could you please help- me to rewrite spark-submit into livy rest json please..?
thank you in advance.

Answer 1

Maybe you should check your JVM. To check the JVM config.
And the log shows that
ls: cannot access '/usr/hdp/current/hadoop/lib': No such file or directory. Also to check the path.
Maybe check the Spark User Guide .
To make Spark runtime jars accessible from YARN side, you can specify spark.yarn.archive or spark.yarn.jars. For details please refer toSpark Properties. If neither spark.yarn.archive nor spark.yarn.jars is specified, Spark will create a zip file with all jars under $SPARK_HOME/jarsand upload it to the distributed cache.