I keep have errors on console, I want to see the results in viewer to see table for airquality.
my code:
library(table1)
table1(~ Ozone+Solar.R+Temp+Month2, data = airquality)
table1(~ Ozone+Solar.R+Temp|Month2, data = airquality)
library(table1)
table1(~ Ozone+Solar.R+Temp+Month2, data = airquality)
Error in ifelse(x >= 10^digits & isFALSE(round.integers), formatC(round(x), :
could not find function "isFALSE"
table1(~ Ozone+Solar.R+Temp|Month2, data = airquality)
Error in ifelse(x >= 10^digits & isFALSE(round.integers), formatC(round(x), :
could not find function "isFALSE"
could you help me out?
Related
I am trying to use the biomaRt package to access the data from Ensembl, however I got error message when using the useDataset() function. My codes are shown below.
library(httr)
listMarts()
ensembl = useMart("ENSEMBL_MART_ENSEMBL")
listDatasets(ensemble)
ensembl = useDataset("hsapiens_gene_ensembl",mart = ensemble)
When I type useDataset function i got error message like this:
> ensembl = useDataset("hsapiens_gene_ensembl",mart = ensembl)
Ensembl site unresponsive, trying asia mirror
Error in textConnection(text, encoding = "UTF-8") :
invalid 'text' argument
and sometimes another different error message showed as:
> ensembl = useDataset("hsapiens_gene_ensembl",mart = ensembl)
Ensembl site unresponsive, trying asia mirror
Error in textConnection(bmResult) : invalid 'text' argument
it seems like that the mirror automatically change to asia OR useast OR uswest, but the error message still shows up over and over again, and i don't know what to do.
So if anyone could help me with this? I will be very grateful for any help or suggestion.
Kind regards Riley Qiu, Dongguan, China
I am running query in CI_INFOOBJECTS to fetch all the webi documents present in root folder and subfolders.
This query returns 70 records in Query Builder but when i am running it using requests.post, it gives me top 50 records only. I tried changing offset and limit but still returning same 50 records.
Can anyone help me resolve this as this is the best solution that i found till now to get all the reports from folders and sub folders to update the source universe.
folder_get = requests.get(bip_url + '/v1/cmsquery', headers=headers)
folder_root = etree.fromstring(folder_get.text)
Query_var = 'SELECT SI_ID,SI_NAME FROM CI_INFOOBJECTS WHERE SI_KIND = \'WEBI\' AND SI_ANCESTOR = 6526 ORDER BY SI_ID'
folder_root[0].text = Query_var
data1 = etree.tostring(folder_root)
folder_post = requests.post(bip_url + '/v1/cmsquery?offset=51&limit=100', headers = headers, data = data1)
folder_post.content
Try using page and pagesize instead of offset and limit.
folder_post = requests.post(bip_url + '/v1/cmsquery?page=1&pagesize=100', headers = headers, data = data1)
This should give you the 70 records that you expect.
I am having an issue with Geopandas and PyProj.
I am loading a premade shp file from GeoPandas
borough = gpd.read_file(gpd.datasets.get_path('nybb'))
When trying to do a crs transformation with the following code:
borough = borough.to_crs({'init': 'epsg:4326'})
I get the error:
ProjError: Error creating Transformer from CRS.: (Internal Proj Error: proj_create_operations: SQLite error on SELECT source_crs_auth_name, source_crs_code, target_crs_auth_name, target_crs_code, cov.auth_name, cov.code, cov.table_name, area.south_lat, area.west_lon, area.north_lat, area.east_lon, ss.replacement_auth_name, ss.replacement_code FROM coordinate_operation_view cov JOIN area ON cov.area_of_use_auth_name = area.auth_name AND cov.area_of_use_code = area.code LEFT JOIN supersession ss ON ss.superseded_table_name = cov.table_name AND ss.superseded_auth_name = cov.auth_name AND ss.superseded_code = cov.code AND ss.superseded_table_name = ss.replacement_table_name AND ss.same_source_target_crs = 1 WHERE ((source_crs_auth_name = ? AND source_crs_code = ? AND target_crs_auth_name = ? AND target_crs_code = ?) OR (source_crs_auth_name = ? AND source_crs_code = ? AND target_crs_auth_name = ? AND target_crs_code = ?)) AND cov.deprecated = 0 AND cov.auth_name = ? ORDER BY pseudo_area_from_swne(south_lat, west_lon, north_lat, east_lon) DESC, (CASE WHEN accuracy is NULL THEN 1 ELSE 0 END), accuracy: no such column: ss.same_source_target_crs)
I really am totally clueless about what to do here.
PS: This is my first stackoverflow post, so I apologize in advanced for the poor layout of this post.
I am wondering if I can do select() on sub_query.
I am able to do join sub_query with any peewee.Model. But when I wrote a sub_query and I wanted to just group by with one of the column
e.g. sub_query.select(sub_query.c.column_1, fn.COUNT(sub_query.c.column2)alias('col2_count')).group_by(sub_query.c.column_1)
query was not nested and was giving SQL syntax error.
(Can't reveal the code)
(I have done alias() on sub_query)
Edit
Example:
class Product(Model):
id = PrimaryKeyField()
name = CharField()
created_date = DateField()
class Part(Model):
id = PrimaryKeyField()
product = ForeignKeyField(Product)
name = CharField()
class ProductError(Model):
id = PrimaryKeyField()
product = ForeignKeyField(Product)
note = CharField()
class PartError(Model):
id = PrimaryKeyField()
part = ForeignKeyField(Part)
error = ForeignKeyField(ErrorMaster)
Here Product can have general error and
parts can have specific error which are predefined in ErrorMaster
I just want to know count of product which have errors against total products date wise. (error is product error or error in any part)
So sub_query is something like
sub_q = Product.select(
Product.created_date,
Product.id.alias('product_id'),
fn.IF(# checks if product has error
ProductError.is_null(True), if no product error check part error
fn.IF(fn.COUNT(PartError.id) == 0, 0, 1), # checks if error count > 0 then there is error in part
1
).alias('is_error')
).join(Part, on=Product.id == Part.product)
.join(ProductError, JOIN_LEFT_OUTER, on=Product.id == ProductError.product)
.join(PartError, JOIN_LEFT_OUTER, on=PartError.part == Part.id)
.where(Product.created_date.between(from_date, to_date))
.group_by(Product.id).alias('some_alias')
# below does not work but I can do this in sql
query = sub_q.select(sub_q.c.created_date,
fn.COUNT(sub_q.c.product_id).alias('total_products'),
fn.SUM(sub_q.c.is_error).alias('product_with_errors'))
.group_by(sub_q.c.created_date)
I am trying to find the data between two values. I am using this code in a GUI programme, the starting_value and ending_value which you can see in the code below are selected from 2 listboxes in a previous part of the code.
% --- Executes on button press in CalculateIntensity.
function CalculateIntensity_Callback(hObject, eventdata, handles)
% hObject handle to CalculateIntensity (see GCBO)
% eventdata reserved - to be defined in a future version of MATLAB
% handles structure with handles and user data (see GUIDATA)
% Trapz function
starting_value = getappdata(0,'StartValue');
ending_value = getappdata(0,'EndValue');
StartingValue = str2mat(starting_value)
EndingValue = str2mat(ending_value)
A = getappdata(0,'XYarray')
data_found = A(A(:,[1,2]) > StartingValue & A(:,[1,2]) < EndingValue)
I found help on:
http://www.mathworks.com/matlabcentral/answers/8556-how-to-find-vector-elements-between-two-values-efficiently
However the
data_found = A(A(:,[1,2]) > StartingValue & A(:,[1,2]) < EndingValue)
part of the code wont work for me, I think starting_value and ending_value are strings so I tried converting it to a matrix but I get the error:
Error using <
Matrix dimensions must agree.
Error in MichelleLaycockGUImainwindow>CalculateIntensity_Callback (line 119)
data_found = A(A(:,[1,2]) > StartingValue & A(:,[1,2]) < EndingValue)
an example of data used is:
A =
1.0e+03 *
0.1660 1.1570
0.1664 0.4650
0.1668 0
0.1672 1.0200
0.1676 1.0110
0.1680 1.0200
0.1684 1.0640
0.1688 1.1100
0.1692 1.0370
0.1696 1.0050
0.1700 1.0750
0.1704 1.0850
0.1708 1.1310
0.1712 1.0630
0.1716 1.0370
0.1719 1.1070
0.1724 1.1450
I'm not really sure where I'm going wrong, any help would be greatly appreciated as it's all I need to complete my work. Thanks in advance!
As some of the values in my data vary rather than just decreasing or increasing the greater than or equal to method I was originally trying to use did not work. So rather than using the loop to get the data between the two points selected I went with a different method.
I use[~,indx1]=ismember(StartingValue,A,'rows') this finds the row number of the selected data and then I use this information to extract the data between and including the selected data.
Here is the full code I used to do this:
starting_value = getappdata(0,'StartValue');
ending_value = getappdata(0,'EndValue');
StartingValue = str2num(starting_value);
EndingValue = str2num(ending_value);
A = getappdata(0,'XYarray');
[~,indx1]=ismember(StartingValue,A,'rows');
[~,indx2]=ismember(EndingValue,A,'rows');
arrayfortrapz = A(indx1:indx2,1:2); %array of data including and between selected data
I hope this of some help to anybody that may run into a similar issue.