Remove Volume Group from a re-pourpsed disk - linux

I have this SSD that was in another Ovirt cluster that I destroyed, and now I'm trying to re-purpose this disk but can't seem to clear it. I have tried wipefs and dd but it still shows up in fdisk -l. How can I clear all lvms from this disk?
sudo fdisk -l
Disk /dev/sda: 3.5 TiB, 3840755982336 bytes, 7501476528 sectors
Disk model: SAMSUNG MZ7LH3T8
Units: sectors of 1 * 512 = 512 bytes
Sector size (logical/physical): 512 bytes / 4096 bytes
I/O size (minimum/optimal): 4096 bytes / 4096 bytes
Disk /dev/mmcblk0: 58.25 GiB, 62537072640 bytes, 122142720 sectors
Units: sectors of 1 * 512 = 512 bytes
Sector size (logical/physical): 512 bytes / 512 bytes
I/O size (minimum/optimal): 512 bytes / 512 bytes
Disklabel type: gpt
Disk identifier: 61C206C7-69A3-4C51-9215-1C0B45E32661
Device Start End Sectors Size Type
/dev/mmcblk0p1 2048 788479 786432 384M Linux filesystem
/dev/mmcblk0p2 788480 1048575 260096 127M EFI System
/dev/mmcblk0p3 1048576 1050623 2048 1M BIOS boot
/dev/mmcblk0p4 1050624 122142686 121092063 57.8G Linux filesystem
[core#h2-master-01 ~]$ sudo lsblk
NAME MAJ:MIN RM SIZE RO TYPE MOUNTPOINT
sda 8:0 0 3.5T 0 disk
ââgluster_vg_sdc-gluster_thinpool_gluster_vg_sdc_tmeta 253:0 0 15.8G 0 lvm
â ââgluster_vg_sdc-gluster_thinpool_gluster_vg_sdc-tpool 253:2 0 3.5T 0 lvm
â ââgluster_vg_sdc-gluster_thinpool_gluster_vg_sdc 253:3 0 3.5T 1 lvm
â ââgluster_vg_sdc-gluster_lv_data 253:4 0 3.4T 0 lvm
ââgluster_vg_sdc-gluster_thinpool_gluster_vg_sdc_tdata 253:1 0 3.5T 0 lvm
ââgluster_vg_sdc-gluster_thinpool_gluster_vg_sdc-tpool 253:2 0 3.5T 0 lvm
ââgluster_vg_sdc-gluster_thinpool_gluster_vg_sdc 253:3 0 3.5T 1 lvm
ââgluster_vg_sdc-gluster_lv_data 253:4 0 3.4T 0 lvm
mmcblk0 179:0 0 58.2G 0 disk
ââmmcblk0p1 179:1 0 384M 0 part /boot
ââmmcblk0p2 179:2 0 127M 0 part /boot/efi
ââmmcblk0p3 179:3 0 1M 0 part
ââmmcblk0p4 179:4 0 57.8G 0 part /sysroot
mmcblk0boot0 179:8 0 4M 1 disk
mmcblk0boot1 179:16 0 4M 1 disk
[core#h2-master-01 ~]$ sudo lvdisplay
[core#h2-master-01 ~]$ sudo vgdisplay
[core#h2-master-01 ~]$ sudo pvdisplay

wipefs -a /dev/sda with a reboot seemed looks to have cleared the disk. Thanks all!

Related

bash sh script with user permissions 755, cannot be run

Why can't run it?
If I run it in the following way, it works:
[usuario#MyPC ~]$ sh ./x11vnc.sh
PORT=5900
First, the permissions, so that you can see that it is in 755.
ls -l
-rw-rw-rw- 1 usuario users 4485 dic 2 11:35 x11vnc.log
-rwxr-xr-x 1 usuario users 117 nov 7 14:06 x11vnc.sh
Second,the script file
cat x11vnc.sh
#!/bin/bash
x11vnc -nap -wait 30 -noxdamage -passwd somepass -display :0 -forever -o ~/x11vnc.log -bg -rfbport 5900
Third, I must clarify the structure of the disks
lsblk
NAME MAJ:MIN RM SIZE RO TYPE MOUNTPOINTS
sda 8:0 0 3,6T 0 disk
├─md126 9:126 0 3,6T 0 raid1
│ ├─md126p1 259:3 0 3,6T 0 part /home/usuario
│ └─md126p2 259:4 0 8G 0 part [SWAP]
└─md127 9:127 0 0B 0 md
sdb 8:16 0 3,6T 0 disk
├─md126 9:126 0 3,6T 0 raid1
│ ├─md126p1 259:3 0 3,6T 0 part /home/usuario
│ └─md126p2 259:4 0 8G 0 part [SWAP]
└─md127 9:127 0 0B 0 md
nvme0n1 259:0 0 232,9G 0 disk
├─nvme0n1p1 259:1 0 232,6G 0 part /
└─nvme0n1p2 259:2 0 256M 0 part /boot
I am the user usuario.
I can edit and modify the x11vnc.sh file as I wish, but I can't run it, and I need to run it to include in the auto-start session of the plasma.
[usuario#MyPC ~]$ ~/x11vnc.sh
-bash: /home/usuario/x11vnc.sh: permission denied
Why can't run it?
If I run it in the following way, it works:
[usuario#MyPC ~]$ sh ./x11vnc.sh
PORT=5900
Thank you all, specially to #CharlesDuffy
I change the fstab line from
UUID=16b711b6-789f-4c27-9d6c-d0f744407f00 /home/usuario ext4 auto,exec,rw,user,relatime 0 2
to
UUID=16b711b6-789f-4c27-9d6c-d0f744407f00 /home/usuario ext4 auto,rw,user,exec,relatime 0 2
The position of exec is important, since user also applies noexec. By putting exec after user, you ensure that exec is set. The most important options should be listed last

Errno 28 No space availble on '/var/tmp/...'

I would like to install algobox for my studies but it is impossible for me to install it or even to update my computer. I looked for it and I saw that it was probably a problem of space in my partition.
I made the command "df -h" to see what was in my score and it displayed this:
Sys. de fichiers Taille Utilisé Dispo Uti% Monté sur
devtmpfs 7,8G 0 7,8G 0% /dev
tmpfs 7,8G 15M 7,8G 1% /dev/shm
tmpfs 7,8G 2,1M 7,8G 1% /run
/dev/nvme0n1p7 69G 66G 0 100% /
tmpfs 7,8G 40K 7,8G 1% /tmp
/dev/loop2 224M 224M 0 100% /var/lib/snapd/snap/code/108
/dev/loop0 999M 999M 0 100% /var/lib/snapd/snap/android-studio/123
/dev/loop1 143M 143M 0 100% /var/lib/snapd/snap/chromium/2105
/dev/loop4 115M 115M 0 100% /var/lib/snapd/snap/core/13741
/dev/nvme0n1p4 976M 247M 663M 28% /boot
/dev/loop5 63M 63M 0 100% /var/lib/snapd/snap/deezer-unofficial-player/11
/dev/nvme0n1p2 96M 46M 51M 48% /boot/efi
/dev/nvme0n1p8 114G 40G 69G 37% /home
/dev/loop7 56M 56M 0 100% /var/lib/snapd/snap/core18/2566
/dev/loop8 64M 64M 0 100% /var/lib/snapd/snap/core20/1623
/dev/loop10 347M 347M 0 100% /var/lib/snapd/snap/gnome-3-38-2004/115
/dev/loop11 176M 176M 0 100% /var/lib/snapd/snap/postman/133
/dev/loop17 151M 151M 0 100% /var/lib/snapd/snap/remmina/5379
/dev/loop18 82M 82M 0 100% /var/lib/snapd/snap/discord/143
/dev/loop19 165M 165M 0 100% /var/lib/snapd/snap/gnome-3-28-1804/161
/dev/loop21 48M 48M 0 100% /var/lib/snapd/snap/snapd/16778
/dev/loop22 92M 92M 0 100% /var/lib/snapd/snap/gtk-common-themes/1535
/dev/loop23 71M 71M 0 100% /var/lib/snapd/snap/core22/275
/dev/loop24 128K 128K 0 100% /var/lib/snapd/snap/bare/5
/dev/loop27 219M 219M 0 100% /var/lib/snapd/snap/gnome-3-34-1804/77
/dev/loop28 415M 415M 0 100% /var/lib/snapd/snap/gnome-42-2204/29
tmpfs 1,6G 88K 1,6G 1% /run/user/1000
The /var/tmp does not seem to be mounted separate from / and it looks you still have 3G free
Sys. de fichiers Taille Utilisé Dispo Uti% Monté sur
/dev/nvme0n1p7 69G 66G 0 100% /
I would suggest running a "df -i" to see the inode utilization at the IUse% column(it must be under 100%) as if you have a lot of small files, each one will utilize one inode and if you are using 100% of inodes you will get the "No space left error".

How to craete a NVMe with 4K sector size in KVM-QEMU

For testing purposes, I am creating a virtual machine as it follows:
qemu-img create -f qcow2 \
-o cluster_size=4096,preallocation=full \
/home/marcop/.libvirt/nvme-20G.qcow2 20G
qemu-system-x86_64 -machine q35,accel=kvm \
-m 4096 \
-smp 4 \
-cpu host \
-boot d \
-cdrom /var/lib/libvirt/isos/archlinux-2020.10.01-x86_64.iso \
-drive file=/home/marcop/.libvirt/nvme-20G.qcow2,if=none,aio=native,cache.direct=on,id=D24 \
-device nvme,drive=D24,serial=1234,logical_block_size=4096,physical_block_size=4096
When booted inside the machine, I use fdisk and nvme-cli to check the sector size, but it's always 512B.
pacman -Sy nvme-cli
fdisk -l /dev/nvme0n1
with output:
Disk /dev/nvme0n1: 20 GiB, 21474836480 bytes, 41943040 sectors
Disk model: QEMU NVMe Ctrl
Units: sectors of 1 * 512 = 512 bytes
Sector size (logica/physical): 512 bytes / 512 bytes
I/O size (minimum/optimal): 512 bytes / 512 bytes
Looking for the available sector size modes with nvme-cli (see here and here for details on NVMe)
nvme id-ns /dev/nvme0n1
return output:
NVME Identify Namespace 1:
nsze : 0x2800000
ncap : 0x2800000
nuse : 0x2800000
nsfeat : 0
nlbaf : 0
flbas : 0
mc : 0
dpc : 0
dps : 0
nmic : 0
rescap : 0
fpi : 0
dlfeat : 0
nawun : 0
nawupf : 0
nacwu : 0
nabsn : 0
nabo : 0
nabspf : 0
noiob : 0
nvmcap : 0
nsattr : 0
nvmsetid: 0
anagrpid: 0
endgid : 0
nguid : 00000000000000000000000000000000
eui64 : 0000000000000000
lbaf 0 : ms:0 lbads:9 rp:0 (in use)
Which indicates the only one sector profile exits. For comparison, the output of the same command issued for my physical NVMe returns
[...]
lbaf 0 : ms:0 lbads:9 rp:0x2 (in use)
lbaf 1 : ms:0 lbads:12 rp:0x1
Any help would be greatly appreciated!
run command to format with 4k. But beware that format will wipe out data.
nvme format /dev/nvme0n1 --lbaf=1

Handle EOF with multi-line command in Dockerfile

I'm trying to use sfdisk to create an image file inside a docker container and I can use below command without any problem:
root#c8e9be2eb26f:/# sfdisk bbb_image.img << EOF
> 1M,48M,0xE,*
> ,,,-
> EOF
Checking that no-one is using this disk right now ... OK
Disk bbb_image.img: 1 GiB, 1073741824 bytes, 2097152 sectors
Units: sectors of 1 * 512 = 512 bytes
Sector size (logical/physical): 512 bytes / 512 bytes
I/O size (minimum/optimal): 512 bytes / 512 bytes
>>> Created a new DOS disklabel with disk identifier 0x34b8e793.
bbb_image.img1: Created a new partition 1 of type 'W95 FAT16 (LBA)' and of size 48 MiB.
bbb_image.img2: Created a new partition 2 of type 'Linux' and of size 975 MiB.
bbb_image.img3: Done.
New situation:
Disklabel type: dos
Disk identifier: 0x34b8e793
Device Boot Start End Sectors Size Id Type
bbb_image.img1 * 2048 100351 98304 48M e W95 FAT16 (LBA)
bbb_image.img2 100352 2097151 1996800 975M 83 Linux
The partition table has been altered.
Syncing disks.
Now in my Dockerfile this seems doesn't work and reproduce incomplete results:
RUN sfdisk bbb_image.img << "EOF\n\
1M,48M,0xE,*\n\
,,,-\n\
EOF"
And reproduce this in the console which is wrong:
Step 4/4 : RUN sfdisk bbb_image.img << "EOF\n1M,48M,0xE,*\n,,,-\nEOF\n"
---> Running in afc86ffef92a
Checking that no-one is using this disk right now ... OK
Disk bbb_image.img: 1 GiB, 1073741824 bytes, 2097152 sectors
Units: sectors of 1 * 512 = 512 bytes
Sector size (logical/physical): 512 bytes / 512 bytes
I/O size (minimum/optimal): 512 bytes / 512 bytes
>>> Done.
New situation:
ERROR: Service 'test' failed to build: The command '/bin/sh -c sfdisk bbb_image.img << "EOF\n1M,48M,0xE,*\n,,,-\nEOF\n"' returned a non-zero code: 1
I'm not sure how to handle the EOF in the Dockerfile.
Maybe try this one:
RUN sfdisk bbb_image.img << "\n1M,48M,0xE,*\n,,,-\n"

Run program on boot with initramfs

I'm running uClinux on a SmartFusion2 as part of a University team building a small cube satellite. However, I'm not super experienced in Linux kernel, and this issue has had me stumped for a few days. I'm trying to get the SmartFusion to run a program on bootup. Currently, the only .uImage that does this is the test 'hello' file. I'm trying to recreate the process for another program, but am running into some difficulties.
in my hello directory I have the following files: hello.busybox, hello.kernel.M2S, help.txt, hello.uImage, Makefile, hello.initramfs, hello (directory)
in the hello subdirectory (projects/hello/hello):
hello (executable), hello.c, hello.gdb, hello.h, hello.o, Makefile
to try and get the uImage to boot and run a different program, I made a copy of my projects/hello/hello directory and renamed it 'goodbye', with a few minor changes int the .h and .c files for testing purposes. Now I'm trying to get the executable 'hello' in projects/hello/goodbye to run on boot.
My initramfs file originally looked like this:
# This is a very simple, default initramfs
dir /dev 0755 0 0
nod /dev/console 0600 0 0 c 5 1
nod /dev/tty 0666 0 0 c 5 0
nod /dev/null 0600 0 0 c 1 3
nod /dev/mem 0600 0 0 c 1 1
nod /dev/kmem 0600 0 0 c 1 2
nod /dev/zero 0600 0 0 c 1 5
nod /dev/random 0600 0 0 c 1 8
nod /dev/urandom 0600 0 0 c 1 9
dir /dev/pts 0755 0 0
nod /dev/ptmx 0666 0 0 c 5 2
nod /dev/ttyS0 0666 0 0 c 4 64
nod /dev/ttyS1 0666 0 0 c 4 65
nod /dev/ttyS2 0666 0 0 c 4 66
nod /dev/ttyS3 0666 0 0 c 4 67
nod /dev/ttyS4 0666 0 0 c 4 68
nod /dev/ttyS5 0666 0 0 c 4 69
dir /bin 755 0 0
dir /proc 755 0 0
file /bin/hello ${INSTALL_ROOT}/projects/${SAMPLE}/hello/hello 755 0 0
slink /bin/init hello 777 0 0
I changed the last two lines of the initramfs to read as follows:
file /bin/hello ${INSTALL_ROOT}/projects/${SAMPLE}/hello/goodbye 755 0 0
slink /bin/init hello 777 0 0
But when I try and boot the SmartFusion2 after remaking the uImage, I get this, witht the error at the bottom:
Starting kernel ...
Linux version 2.6.33-arm1 (ecenstudent#EE10308) (gcc version 4.4.1 (Sourcery G++ Lite 2010q1-189) ) #38 Thu May 25 09:09:08 MDT 2017
CPU: ARMv7-M Processor [412fc231] revision 1 (ARMv7M)
CPU: NO data cache, 8K instruction cache
Machine: Microsemi M2S
Built 1 zonelists in Zone order, mobility grouping on. Total pages: 16256
Kernel command line: m2s_platform=m2s-fg484-som console=ttyS0,115200 panic=10 ip=10.2.118.102:10.2.118.101:192.168.0.1::m2s-fg484-som:eth0:off ethaddr=3C:FB:96:05:00:53
PID hash table entries: 256 (order: -2, 1024 bytes)
Dentry cache hash table entries: 8192 (order: 3, 32768 bytes)
Inode-cache hash table entries: 4096 (order: 2, 16384 bytes)
Memory: 64MB = 64MB total
Memory: 64408k/64408k available, 1128k reserved, 0K highmem
Virtual kernel memory layout:
vector : 0x00000000 - 0x00001000 ( 4 kB)
fixmap : 0xfff00000 - 0xfffe0000 ( 896 kB)
vmalloc : 0x00000000 - 0xffffffff (4095 MB)
lowmem : 0xa0000000 - 0xa4000000 ( 64 MB)
modules : 0xa0000000 - 0x01000000 (1552 MB)
.init : 0xa0008000 - 0xa0012000 ( 40 kB)
.text : 0xa0074bc0 - 0xa0083000 ( 58 kB)
.data : 0xa0084000 - 0xa008cce0 ( 36 kB)
Hierarchical RCU implementation.
NR_IRQS:83
Calibrating delay loop... 132.30 BogoMIPS (lpj=661504)
Mount-cache hash table entries: 512
Switching to clocksource mss_timer2
Serial: 8250/16550 driver, 2 ports, IRQ sharing disabled
serial8250.0: ttyS0 at MMIO 0x40000000 (irq = 10) is a 16550A
console [ttyS0] enabled
serial8250.1: ttyS1 at MMIO 0x40010000 (irq = 11) is a 16550A
Freeing init memory: 40K
Kernel panic - not syncing: No init found. Try passing init= option to kernel.
Backtrace: no frame pointer
Rebooting in 10 seconds..
Can somebody help explain why this is happening and what I need to do to my initramfs to make it run the proper program on boot? Thanks!!
As it turns out, I was confused about how those two lines worked. When I finally figured it out, they looked like this:
file /bin/hello ${INSTALL_ROOT}/projects/${SAMPLE}/goodbye/hello 755 0 0
slink /bin/init hello 777 0 0
then it worked as desired, and I was able to implement it into other uImages.

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