I have a regression model with Euclidean distance as a loss function and RMSE as a metric evaluation (lower is better). When I passed my train, test sets to model.fit I have train_rmse, and test_rmse which their values made sense to me. But when I pass the test sets into model.evalute after loading the weight of the trained model I got different results which are approximately twice the result with model.fit. And I am aware of the difference that should happen between the train evaluation and test evaluation as I know from Keras that :
the training loss is the average of the losses over each batch of training data. Because your model is changing over time, the loss over the first batches of an epoch is generally higher than over the last batches. On the other hand, the testing loss for an epoch is computed using the model as it is at the end of the epoch, resulting in a lower loss.
But here I am talking about the result of test-set passed to model.fit in which I beleived is evaluated on the final model. In Keras documentation, they said on validation argument that I am passing the test set in it:
validation_data: Data on which to evaluate the loss and any model metrics at the end of each epoch. The model will not be trained on this data.
When I searched about the problem I found several issues
1- Some people like here report that this issue is with the model itself if they have batch normalization layer,or if you do transfer learning and freeze some BN layers like here. my model has BN layers, and I did not freeze any layer. Also, I used the same model for the mulit-class classification problem (not regression) and the result was the same for test set in the model.fit and model.evaluate.
2- Other people like said that this is related with either the prediction or metric calculation like here, in which they found that this difference is related with the different of dtype for y_true and y_pred if someone is float32 and other float64 for example, then the metric calculation will be different. When they unified the dtype the problem is fixed.
I believed that the last case applied to me since in the regression task my labels now is tf.float32. My y_true labels already cast to tf.float32 through tfrecord, so I tried to cast the y_pred to tf.float32 before the rmse calculation, and I still have the difference in the result.
So My questions are:
Why this difference in results
To whom I should rely for test set, on model.fit result or model.evalute
I know that for training loss and accuracy, keras does a running average over the batches, and I know for model.evalute, these metric are calculated by taking all the dataset one time on the final model. But how the validation loss and accuracy calculated for validation set passed to model.fit?
UPDATE:
The problem was in the shape conflict between the y_true and y_pred. As for y_true label I save it in tfrecords as float single value and eventually will be with the size of [batch_size] while the regression model gives the prediction as [batch_size, 1] and then the result of tf.subtract(y_true, y_pred) in rmse equation will result in matrix of [batch_size, batch_sizze] and with taking the mean of this final one you will never guess it is wrong and the code will not throw any error but the calculation of rmse will be wrong. I am still working to make the shape consistent but still didn't find a good solution.
Related
I am training an ML model in Tensorflow 1.15 using a custom training loop and I want to print out the loss, however, it is a vector with a dimension equal to the batch size. What does Keras do when you call model.fit() to print the loss as a float? Does it reduce it to the mean of the vector, or perhaps it performs some other reduction?
The reason I am asking is that I want to make sure the loss I am logging is consistent throughout my models and others did not require a custom training loop.
I made two different convolution neural networks for a multi-class classification. And I tested the performance of the two networks using evaluate_generator function in keras. Both models give me comparable accuracies. One gives me 55.9% and the other one gives me 54.8%. However, the model that gives me 55.9% gives a validation loss of 5.37 and the other 1.24.
How can these test losses be so different when the accuracies are
similar. If anything I would expect the loss for the model with
55.9% accuracy to be lower but it's not.
Isn't loss the total sum of errors the network is making?
Insights would be appreciated.
Isn't loss the total sum of errors the network is making?
Well, not really. Loss function or cost function is a function that maps an event or values of one or more variables onto a real number intuitively representing some "cost" associated with the event.
For exaple, in regression tasks loss function can be mean squared error. In classification - binary or categorical crossentropy. These loss functions measure how your model understanding of data is close to the reality.
Why both loss and accuracy are high?
High loss doesn't mean you model don't know anything. In basic case you can think about it that the smaller the loss, the more confident the model is in its choice.
So model with the higher loss not really sure about its answers.
You can also read this discussion about high loss and accuracy
Even though the accuracies are similar, the loss value is not correlated when comparing different models.
Accuracy measures the fraction of correctly classified samples over the Total Population of your samples.
With regards to the loss value, from keras documentation:
Return value
For scalars, the loss value of the test (if the model does not have a merit function) or > a list of scalars (if the model computes another merit function).
If this doesn't help on your case (I don't have a way to reproduce the issue), please check the following known issues in keras, with regards to the evaluate_generator function:
evaluate_generator
I am debugging a sequence-to-sequence model and purposely tried to perfectly overfit a small dataset of ~200 samples (sentence pairs of length between 5-50). I am using negative log-likelihood loss in pytorch. I get low loss (~1e^-5), but the accuracy on the same dataset is only 33%.
I trained the model on 3 samples as well and obtained 100% accuracy, yet during training I had loss. I was under the impression that negative log-likelihood only gives loss (loss is in the same region of ~1e^-5) if there is a mismatch between predicted and target label?
Is a bug in my code likely?
There is no bug in your code.
The way things usually work in deep nets is that the networks predicts the logits (i.e., log-likelihoods). These logits are then transformed to probability using soft-max (or a sigmoid function). Cross-entropy is finally evaluated based on the predicted probabilities.
The advantage of this approach is that is numerically stable, and easy to train with. On the other side, because of the soft-max you can never have "perfect" 0/1 probabilities for your predictions: That is, even when your network has perfect accuracy it will never assign probability 1 to the correct prediction, but "close to one". As a result, the loss will always be positive (albeit small).
Below is a plot of validation loss and training loss for my CNN model.
The validation loss is decreasing with training loss but there is a gap between the two functions.
What does this mean? The model is not overfitting as the validation loss is decreasing, but is something wrong with the model because there is a gap between the two functions?
I'm new to this, so please help.
Validatoin loss
Overfitting is not necessarily accompanied by the flattening of the validation loss curve - the gap between the loss curves simply indicates that the model is learning relationships that do not apply to the validation data. The first thing I would check in such a scenario is the balance of the sets - do both training and validation sets comprise of an equal distribution of classes/values? Was the entire dataset properly shuffled before assigning 'training' and 'validation' tags to them?
Training accuracy and validation accuracy gives nearly 0.87, but in testing part using evaluate() function gives fluctuated results according to different batch_size parameter values. Testing accuracy varies from 0.5 to 0.66. Is the optimum batch_size value for evaluate has to be same as in fit()?
I don't see how the batch size parameter of the evaluate function can change the accuracy of your model. Only the batch size used during the training can modify the performances of your model (see this). Are you testing the same trained model for your different tests? If you're testing newly trained models every time, it explains the variation of accuracy you observe (because of the random initialization of the weights for example).