Using Windows 10, anaconda as a package manager. I have a base environment running python 3.7 where matplotlib works fine. When I create a new environment and install both keras and matplotlib, I start to run into problems:
>>> import matplotlib.pyplot as plt
Traceback (most recent call last):
File "<stdin>", line 1, in <module>
File "C:\...\Anaconda3\envs\keras_env\lib\site-packages\matplotlib\__init__.py", line 1111, in <module>
rcParamsOrig = RcParams(rcParams.copy())
File "C:\...\Anaconda3\envs\keras_env\lib\site-packages\matplotlib\__init__.py", line 891, in __getitem__
from matplotlib import pyplot as plt
File "C:\...\Anaconda3\envs\keras_env\lib\site-packages\matplotlib\pyplot.py", line 32, in <module>
import matplotlib.colorbar
File "C:\...\Anaconda3\envs\keras_env\lib\site-packages\matplotlib\colorbar.py", line 40, in <module>
import matplotlib._constrained_layout as constrained_layout
File "C:\...\Anaconda3\envs\keras_env\lib\site-packages\matplotlib\_constrained_layout.py", line 52, in <module>
from matplotlib.legend import Legend
File "C:\...\Anaconda3\envs\keras_env\lib\site-packages\matplotlib\legend.py", line 43, in <module>
from matplotlib.offsetbox import HPacker, VPacker, TextArea, DrawingArea
File "C:\...\Anaconda3\envs\keras_env\lib\site-packages\matplotlib\offsetbox.py", line 33, in <module>
from matplotlib.image import BboxImage
File "C:\...\Anaconda3\envs\keras_env\lib\site-packages\matplotlib\image.py", line 19, in <module>
from matplotlib.backend_bases import FigureCanvasBase
File "C:\...\Anaconda3\envs\keras_env\lib\site-packages\matplotlib\backend_bases.py", line 46, in <module>
from matplotlib import (
ImportError: cannot import name 'get_backend'
Any suggestions? This is a fresh installation of conda. All I've done to get here is run conda create --name keras_env keras matplotlib, enter the environment, and try to import matplotlib. These are the packages conda installs:
## Package Plan ##
environment location: C:\...\Anaconda3\envs\keras_env
added / updated specs:
- keras
- matplotlib
The following NEW packages will be INSTALLED:
_tflow_select: 2.2.0-eigen
absl-py: 0.5.0-py36_0
astor: 0.7.1-py36_0
blas: 1.0-mkl
ca-certificates: 2018.03.07-0
certifi: 2018.10.15-py36_0
cycler: 0.10.0-py36h009560c_0
freetype: 2.9.1-ha9979f8_1
gast: 0.2.0-py36_0
grpcio: 1.12.1-py36h1a1b453_0
h5py: 2.8.0-py36h3bdd7fb_2
hdf5: 1.10.2-hac2f561_1
icc_rt: 2017.0.4-h97af966_0
icu: 58.2-ha66f8fd_1
intel-openmp: 2019.0-118
jpeg: 9b-hb83a4c4_2
keras: 2.2.4-0
keras-applications: 1.0.6-py36_0
keras-base: 2.2.4-py36_0
keras-preprocessing: 1.0.5-py36_0
kiwisolver: 1.0.1-py36h6538335_0
libpng: 1.6.35-h2a8f88b_0
libprotobuf: 3.6.0-h1a1b453_0
markdown: 3.0.1-py36_0
matplotlib: 3.0.0-py36hd159220_0
mkl: 2019.0-118
mkl_fft: 1.0.6-py36hdbbee80_0
mkl_random: 1.0.1-py36h77b88f5_1
numpy: 1.15.3-py36ha559c80_0
numpy-base: 1.15.3-py36h8128ebf_0
openssl: 1.0.2p-hfa6e2cd_0
pip: 10.0.1-py36_0
protobuf: 3.6.0-py36he025d50_0
pyparsing: 2.2.2-py36_0
pyqt: 5.9.2-py36h6538335_2
python: 3.6.7-h33f27b4_0
python-dateutil: 2.7.3-py36_0
pytz: 2018.5-py36_0
pyyaml: 3.13-py36hfa6e2cd_0
qt: 5.9.6-vc14h1e9a669_2
scipy: 1.1.0-py36h4f6bf74_1
setuptools: 40.4.3-py36_0
sip: 4.19.8-py36h6538335_0
six: 1.11.0-py36_1
sqlite: 3.25.2-hfa6e2cd_0
tensorboard: 1.11.0-py36he025d50_0
tensorflow: 1.11.0-eigen_py36h346fd36_0
tensorflow-base: 1.11.0-eigen_py36h45df0d8_0
termcolor: 1.1.0-py36_1
tornado: 5.1.1-py36hfa6e2cd_0
vc: 14.1-h0510ff6_4
vs2015_runtime: 14.15.26706-h3a45250_0
werkzeug: 0.14.1-py36_0
wheel: 0.32.2-py36_0
wincertstore: 0.2-py36h7fe50ca_0
yaml: 0.1.7-hc54c509_2
zlib: 1.2.11-h8395fce_2
This issue has been reported here and has been fixed here. The fix will be available in matplotlib 3.0.1, which is scheduled to be release within the next few days.
Until then you may either use python <= 3.6.6 with matplotlib 3.0.0. Or you may use matplotlib 2.2.3 or you may try the fix proposed in the linked issue, namely to create a matplotlibrc file in one of the paths where matplotlib would find it.
Try this:
pip uninstall matplotlib
python -m pip install --upgrade pip
pip install matplotlib
Worked perfectly for me
pip uninstall matplotlib
pip install --upgrade matplotlib
works perfectly!
Simply install the appropriate version:
run this in your Jupyter notebook
!pip3 uninstall matplotlib -y
!pip3 install matplotlib==3.0.1
or in terminal:
pip3 uninstall matplotlib -y
pip3 install matplotlib==3.0.1
Related
This is my error traceback:
Traceback (most recent call last):
File "D:\My projects\aaa.py", line 1, in <module>
import matplotlib.pyplot as plt
File "C:\Users\SHREYANSH\AppData\Local\Programs\Python\Python37-32\lib\site-packages\matplotlib\__init__.py", line 138, in <module>
from . import cbook, rcsetup
File "C:\Users\SHREYANSH\AppData\Local\Programs\Python\Python37-32\lib\site-packages\matplotlib\rcsetup.py", line 28, in <module>
from cycler import Cycler, cycler as ccycler
File "C:\Users\SHREYANSH\AppData\Local\Programs\Python\Python37-32\lib\site-packages\cycler.py", line 46, in <module>
import six
File "D:\My projects\six.py", line 2, in <module>
import matplotlib.pyplot as plt
File "C:\Users\SHREYANSH\AppData\Local\Programs\Python\Python37-32\lib\site-packages\matplotlib\pyplot.py", line 30, in <module>
from cycler import cycler
ImportError: cannot import name 'cycler' from 'cycler' (C:\Users\SHREYANSH\AppData\Local\Programs\Python\Python37-32\lib\site-packages\cycler.py)
I tried it after reinstalling matplotlib but nothing works please help.
Ouch! I found out what was happening. I was naming my sample work as one, two, three, etc. and I also had a file "six.py". Make sure you don't have a file named six.py in your path.
In my case it was a privilege problem, I have uninstall cycler and matplotlib by:
sudo pip uninstall cycler matplotlib
and than install them again with:
pip3 install matplotlib
and it works fine, I hope that could help.
Try to install 'cycler' then install 'matplotlib'
pip install cycler
pip install matplotlib
I coded in jupyter-notebook, fetching data from mysqlserver and then downloaded it as a python script because I want to implement it in my website using cronjob. So when I run the Python script, I'm getting this error:
import seaborn as sns
File "C:\Users\Debadri\AppData\Local\Programs\Python\Python36\lib\site-packages\seaborn\__init__.py", line 6, in <module>
from .rcmod import *
File "C:\Users\Debadri\AppData\Local\Programs\Python\Python36\lib\site-packages\seaborn\rcmod.py", line 5, in <module>
from . import palettes, _orig_rc_params
File "C:\Users\Debadri\AppData\Local\Programs\Python\Python36\lib\site-packages\seaborn\palettes.py", line 12, in <module>
from .utils import desaturate, set_hls_values, get_color_cycle
File "C:\Users\Debadri\AppData\Local\Programs\Python\Python36\lib\site-packages\seaborn\utils.py", line 7, in <module>
from scipy import stats
File "C:\Users\Debadri\AppData\Local\Programs\Python\Python36\lib\site-packages\scipy\__init__.py", line 61, in <module>
from numpy._distributor_init import NUMPY_MKL # requires numpy+mkl
ImportError: cannot import name 'NUMPY_MKL'
I tried to install numpy+mkl .whl file from this link: Numpy+MKL, this (numpy‑1.15.1+mkl‑cp37‑cp37m‑win_amd64.whl) package, but it showed, not supported when I tried to install it.
The following solution worked out:
Solution:
If you are using windows make sure you install numpy+mkl instead of just numpy.
If you have already installed scipy and numpy, uninstall then using "pip uninstall scipy" and "pip uninstall numpy"
Now download scipy from http://www.lfd.uci.edu/~gohlke/pythonlibs/#scipy (appropriate version for your python and system)
and install using "pip install scipy‑1.1.0‑cp36‑cp36m‑win_amd64.whl" (Please install from the list according to your system config)
Your numpy and Scipy both should work now.
These binaries by Christoph Gohlke makes it very easy to install python packages on windows. But make sure you download all the dependent packages from there.
Reference: 4th answer of this question ImportError: cannot import name NUMPY_MKL
I'm trying to call a function from the cluster module, like so:
import sklearn
db = sklearn.cluster.DBSCAN()
and I get the following error:
AttributeError: 'module' object has no attribute 'cluster'
Tab-completing in IPython, I seem to have access to the base, clone, externals, re, setup_module, sys, and warning modules. Nothing else, though others (including cluster) are in the sklearn directory.
Following pbu's advice below and using
from sklearn import cluster
I get:
Traceback (most recent call last):
File "test.py", line 2, in <module>
from sklearn import cluster
File "C:\Python34\lib\site-packages\sklearn\cluster\__init__.py", line 6, in <module>
from .spectral import spectral_clustering, SpectralClustering
File "C:\Python34\lib\site-packages\sklearn\cluster\spectral.py", line 13, in <module>
from ..utils import check_random_state, as_float_array
File "C:\Python34\lib\site-packages\sklearn\utils\__init__.py", line 16, in <module>
from .class_weight import compute_class_weight, compute_sample_weight
File "C:\Python34\lib\site-packages\sklearn\utils\class_weight.py", line 7, in <module>
from ..utils.fixes import in1d
File "C:\Python34\lib\site-packages\sklearn\utils\fixes.py", line 318, in <module>
from scipy.sparse.linalg import lsqr as sparse_lsqr
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\__init__.py", line 109, in <module>
from .isolve import *
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\isolve\__init__.py", line 6, in <module>
from .iterative import *
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\isolve\iterative.py", line 7, in <module>
from . import _iterative
ImportError: DLL load failed: The specified module could not be found.
I'm using Python 3.4 on Windows, scikit-learn 0.16.1.
You probably don't use Numpy+MKL, but only Numpy.
I had the same problem and reinstalling Numpy with MKL
pip install --upgrade --force-reinstall "numpy‑1.16.3+mkl‑cp37‑cp37m‑win32.whl"
fixed it.
Note: update the file to the latest version, possibly 64bit - see the list of available Windows binaries
Problem was with scipy/numpy install. I'd been using the (normally excellent!) unofficial installers from http://www.lfd.uci.edu/~gohlke/pythonlibs/. Uninstall/re-install from there made no difference, but installing with the official installers (linked from http://www.scipy.org/install.html) did the trick.
I am using anaconda got the same error as the OP, when loading Orange, or PlotNine.
I can't recall when this start to happen.
Tracing the dependency of Anaconda3\Lib\site-packages\scipy\special\_ufuncs.cp36-win32.pyd, libifcoremd.dll and libmmd.dll are missing in DependencyWalk. Searching them in anaconda root directry, they are located in both ICC_RT and one version of MKL package.
Adding Anaconda3\pkgs\mkl-2017.0.3-0\Library\bin to PATH, seems to fix SciPy and NumPy related DLL load failure, the above package starts to work again.
I still don't know how to fix this properly. Apparently the downside is that the MKL package could be updated and versions may change so does the path. In this aspect Its equally inconvenient as adding a non-managed package.
Reinstalling ICC_RT fixed the issue for me, libmmd.dll and the related dlls are automatically copied into anaconda3/library/bin afterwards, which is automatically added into PATH by activate command. All previous numpy/scipy related cant load DLL errors are gone now.
From the error log, it shows that scipy module is the most recent module fails to import
File "C:\Python34\lib\site-packages\sklearn\utils\fixes.py", line 318, in <module>
from scipy.sparse.linalg import lsqr as sparse_lsqr
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\__init__.py", line 109, in <module>
from .isolve import *
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\isolve\__init__.py", line 6, in <module>
from .iterative import *
File "C:\Python34\lib\site-packages\scipy\sparse\linalg\isolve\iterative.py", line 7, in <module>
from . import _iterative
ImportError: DLL load failed: The specified module could not be found.
I have the same error that show the same log, the problem'd gone when I uninstall/install scipy:
pip uninstall scipy
pip install scipy
Place this line on top of the python file
from sklearn import cluster
That should do it :))
For me what fixed it were these commands:
pip uninstall sklearn
pip uninstall scikit-learn
pip uninstall scipy
pip install scipy
pip install scikit-learnhere
I had the same issue and solved it by installing/updating the mkl package:
conda install mkl
or
pip install mkl
Just for full information, this also downgraded the following packages:
The following packages will be UPDATED:
mkl: 2017.0.4-h6d528fc_0 defaults --> 2018.0.3-1 defaults
The following packages will be DOWNGRADED:
numpy: 1.11.3-py34_0 defaults --> 1.10.1-py34_0 defaults
pandas: 0.19.2-np111py34_1 defaults --> 0.18.1-np110py34_0 defaults
scikit-learn: 0.18.1-np111py34_1 defaults --> 0.17-np110py34_1 defaults
scipy: 0.19.1-np111py34_0 defaults --> 0.16.0-np110py34_0 defaults
I struggled trying to figure this one out; tried to download and install the (unofficial) Numpy+MKL library from the website (risky/tedious?).
Ultimately found success by:
Login to command prompt using admin rights; how to here: https://superuser.com/questions/968214/open-cmd-as-admin-with-windowsr-shortcut
Uninstall existing/tangled version of Scipy & Numpy
pip uninstall scipy
pip uninstall numpy
Fresh install Scipy & Numpy
pip install scipy
pip install numpy
Run Jupyter notebook; it worked for me.
The message ImportError: DLL load failed: The specified module could not be found
informs that there is failure to identify and source the required DLL(s) to use the scikit-learn library; a fresh install of scipy/numpy probably enables a better routing of DLL connections called from Jupyter notebook code(s).
download microsoft visual c++ distribution
link : https://www.microsoft.com/en-in/download/details.aspx?id=53840
vc_redist.x64.exe
install and run this .exe file in your computer.. the DLL import module error will not appear after this
now it will work fine enjoy :)
I'm trying to install geopandas.
Whether I do one of these :
conda install -c conda-forge geopandas
# or
conda install -c conda-forge fiona
# or
pip3 install Fiona‑1.7.9‑cp36‑cp36m‑win_amd64.whl # downloaded from http://www.lfd.uci.edu/~gohlke/pythonlibs/#fiona
When I try either import geopandas or import fiona, I get the following error :
File "<ipython-input-229-c9ee6bd24dbc>", line 1, in <module>
import geopandas
File "C:\ProgramData\Anaconda3\lib\site-packages\geopandas\__init__.py", line 4, in <module>
from geopandas.io.file import read_file
File "C:\ProgramData\Anaconda3\lib\site-packages\geopandas\io\file.py", line 3, in <module>
import fiona
File "C:\ProgramData\Anaconda3\lib\site-packages\fiona\__init__.py", line 69, in <module>
from fiona.collection import Collection, BytesCollection, vsi_path
File "C:\ProgramData\Anaconda3\lib\site-packages\fiona\collection.py", line 11, in <module>
from fiona.ogrext import (
ImportError: cannot import name 'calc_gdal_version_num'
Any idea on how to solve this ?
(I'm on windows 7 64 bit by the way, in case it's relevant)
EDIT :
It seems this behavior happens only in the IPython console of Spyder (v3.1.4). It doesn't happen when using the python3 command line in the terminal, or the python console of Spyder. I would still love a fix for the IPython console of Spyder, the python console in Spyder is reaaaally slow.
When I try to run the SEC caffe model on from here: https://github.com/kolesman/SEC
I geht the error: ImportError: No module named PyQt4
python demo.py --model SEC.caffemodel --image /data/out/dataset/center/1475186965759787059.jpg --smooth --output result.png
Traceback (most recent call last):
File "demo.py", line 2, in <module>
import pylab
File "/home/ec2-user/anaconda2/lib/python2.7/site-packages/pylab.py", line 1, in <module>
from matplotlib.pylab import *
File "/home/ec2-user/anaconda2/lib/python2.7/site-packages/matplotlib/pylab.py", line 274, in <module>
from matplotlib.pyplot import *
File "/home/ec2-user/anaconda2/lib/python2.7/site-packages/matplotlib/pyplot.py", line 114, in <module>
_backend_mod, new_figure_manager, draw_if_interactive, _show = pylab_setup()
File "/home/ec2-user/anaconda2/lib/python2.7/site-packages/matplotlib/backends/__init__.py", line 32, in pylab_setup
globals(),locals(),[backend_name],0)
File "/home/ec2-user/anaconda2/lib/python2.7/site-packages/matplotlib/backends/backend_qt5agg.py", line 16, in <module>
from .backend_qt5 import QtCore
File "/home/ec2-user/anaconda2/lib/python2.7/site-packages/matplotlib/backends/backend_qt5.py", line 31, in <module>
from .qt_compat import QtCore, QtGui, QtWidgets, _getSaveFileName, __version__
File "/home/ec2-user/anaconda2/lib/python2.7/site-packages/matplotlib/backends/qt_compat.py", line 137, in <module>
from PyQt4 import QtCore, QtGui
ImportError: No module named PyQt4
In this stackoverflow thread they just mention that you can run
conda install pyqt
which results in the following output:
conda install pyqt
Fetching package metadata .......
Solving package specifications: ..........
# All requested packages already installed.
# packages in environment at /home/ec2-user/anaconda2:
#
pyqt 5.6.0 py27_0
Which indicates that I have version 5.6 and not version 4. But I could not find any solution how to downgrade to pyqt4.
so you can Uninstall pyqt5 and download PyQt4 and installed manually
The second option is to modify the code and replace PyQt4 by pyqt5 just pay attention to one thing that the classes in pyqt5 are the same but the irritation is bit different so you may get that specific model doesn't exist in this case check on manual of pyqt5 and fix it
I hope my answer is clear
It looks like the latest version of anaconda forces install of pyqt5.6 over any pyqt build, which will be fatal for your applications. In a terminal, Try:
conda install --channel https://conda.anaconda.org/conda-forge pyqt
conda install -c anaconda pyqt=4.11.4
It will prompt to downgrade conda client. After that, it should be good.