Ordering a loop in bash - linux

I've a bash script like this:
for d in /home/test/*
do
echo $d
done
Which ouputs this:
/home/test/newer dir
/home/test/oldest dir
I'd like to order the folders by creation time so that the 'oldest dir' directory appears first in the list. I've tried ls and tree variations to no avail.
For example,
for d in `ls -d -c -1 $PWD/*`
Returns:
/home/test/oldest
dir
/home/test/newer
dir
Very close, but it does not respect the space in the directory name. My question, how would I have oldest dir on top and support the whitespace?

ls -d -c $PWD/* | while read line
do echo "$line"
done

Another technique, kind of a Schwartzian transform:
stat -c $'%Z\t%n' /home/test/* | sort -n | cut -f2- |
while IFS= read -r filename; do
# ...
This solution is fragile with filenames containing newlines.

Related

Find and delete files, but leave X newest [duplicate]

Is there a simple way, in a pretty standard UNIX environment with bash, to run a command to delete all but the most recent X files from a directory?
To give a bit more of a concrete example, imagine some cron job writing out a file (say, a log file or a tar-ed up backup) to a directory every hour. I'd like a way to have another cron job running which would remove the oldest files in that directory until there are less than, say, 5.
And just to be clear, there's only one file present, it should never be deleted.
The problems with the existing answers:
inability to handle filenames with embedded spaces or newlines.
in the case of solutions that invoke rm directly on an unquoted command substitution (rm `...`), there's an added risk of unintended globbing.
inability to distinguish between files and directories (i.e., if directories happened to be among the 5 most recently modified filesystem items, you'd effectively retain fewer than 5 files, and applying rm to directories will fail).
wnoise's answer addresses these issues, but the solution is GNU-specific (and quite complex).
Here's a pragmatic, POSIX-compliant solution that comes with only one caveat: it cannot handle filenames with embedded newlines - but I don't consider that a real-world concern for most people.
For the record, here's the explanation for why it's generally not a good idea to parse ls output: http://mywiki.wooledge.org/ParsingLs
ls -tp | grep -v '/$' | tail -n +6 | xargs -I {} rm -- {}
Note: This command operates in the current directory; to target a directory explicitly, use a subshell ((...)) with cd:
(cd /path/to && ls -tp | grep -v '/$' | tail -n +6 | xargs -I {} rm -- {})
The same applies analogously to the commands below.
The above is inefficient, because xargs has to invoke rm separately for each filename.
However, your platform's specific xargs implementation may allow you to solve this problem:
A solution that works with GNU xargs is to use -d '\n', which makes xargs consider each input line a separate argument, yet passes as many arguments as will fit on a command line at once:
ls -tp | grep -v '/$' | tail -n +6 | xargs -d '\n' -r rm --
Note: Option -r (--no-run-if-empty) ensures that rm is not invoked if there's no input.
A solution that works with both GNU xargs and BSD xargs (including on macOS) - though technically still not POSIX-compliant - is to use -0 to handle NUL-separated input, after first translating newlines to NUL (0x0) chars., which also passes (typically) all filenames at once:
ls -tp | grep -v '/$' | tail -n +6 | tr '\n' '\0' | xargs -0 rm --
Explanation:
ls -tp prints the names of filesystem items sorted by how recently they were modified , in descending order (most recently modified items first) (-t), with directories printed with a trailing / to mark them as such (-p).
Note: It is the fact that ls -tp always outputs file / directory names only, not full paths, that necessitates the subshell approach mentioned above for targeting a directory other than the current one ((cd /path/to && ls -tp ...)).
grep -v '/$' then weeds out directories from the resulting listing, by omitting (-v) lines that have a trailing / (/$).
Caveat: Since a symlink that points to a directory is technically not itself a directory, such symlinks will not be excluded.
tail -n +6 skips the first 5 entries in the listing, in effect returning all but the 5 most recently modified files, if any.
Note that in order to exclude N files, N+1 must be passed to tail -n +.
xargs -I {} rm -- {} (and its variations) then invokes on rm on all these files; if there are no matches at all, xargs won't do anything.
xargs -I {} rm -- {} defines placeholder {} that represents each input line as a whole, so rm is then invoked once for each input line, but with filenames with embedded spaces handled correctly.
-- in all cases ensures that any filenames that happen to start with - aren't mistaken for options by rm.
A variation on the original problem, in case the matching files need to be processed individually or collected in a shell array:
# One by one, in a shell loop (POSIX-compliant):
ls -tp | grep -v '/$' | tail -n +6 | while IFS= read -r f; do echo "$f"; done
# One by one, but using a Bash process substitution (<(...),
# so that the variables inside the `while` loop remain in scope:
while IFS= read -r f; do echo "$f"; done < <(ls -tp | grep -v '/$' | tail -n +6)
# Collecting the matches in a Bash *array*:
IFS=$'\n' read -d '' -ra files < <(ls -tp | grep -v '/$' | tail -n +6)
printf '%s\n' "${files[#]}" # print array elements
Remove all but 5 (or whatever number) of the most recent files in a directory.
rm `ls -t | awk 'NR>5'`
(ls -t|head -n 5;ls)|sort|uniq -u|xargs rm
This version supports names with spaces:
(ls -t|head -n 5;ls)|sort|uniq -u|sed -e 's,.*,"&",g'|xargs rm
Simpler variant of thelsdj's answer:
ls -tr | head -n -5 | xargs --no-run-if-empty rm
ls -tr displays all the files, oldest first (-t newest first, -r reverse).
head -n -5 displays all but the 5 last lines (ie the 5 newest files).
xargs rm calls rm for each selected file.
find . -maxdepth 1 -type f -printf '%T# %p\0' | sort -r -z -n | awk 'BEGIN { RS="\0"; ORS="\0"; FS="" } NR > 5 { sub("^[0-9]*(.[0-9]*)? ", ""); print }' | xargs -0 rm -f
Requires GNU find for -printf, and GNU sort for -z, and GNU awk for "\0", and GNU xargs for -0, but handles files with embedded newlines or spaces.
All these answers fail when there are directories in the current directory. Here's something that works:
find . -maxdepth 1 -type f | xargs -x ls -t | awk 'NR>5' | xargs -L1 rm
This:
works when there are directories in the current directory
tries to remove each file even if the previous one couldn't be removed (due to permissions, etc.)
fails safe when the number of files in the current directory is excessive and xargs would normally screw you over (the -x)
doesn't cater for spaces in filenames (perhaps you're using the wrong OS?)
ls -tQ | tail -n+4 | xargs rm
List filenames by modification time, quoting each filename. Exclude first 3 (3 most recent). Remove remaining.
EDIT after helpful comment from mklement0 (thanks!): corrected -n+3 argument, and note this will not work as expected if filenames contain newlines and/or the directory contains subdirectories.
Ignoring newlines is ignoring security and good coding. wnoise had the only good answer. Here is a variation on his that puts the filenames in an array $x
while IFS= read -rd ''; do
x+=("${REPLY#* }");
done < <(find . -maxdepth 1 -printf '%T# %p\0' | sort -r -z -n )
For Linux (GNU tools), an efficient & robust way to keep the n newest files in the current directory while removing the rest:
n=5
find . -maxdepth 1 -type f -printf '%T# %p\0' |
sort -z -nrt ' ' -k1,1 |
sed -z -e "1,${n}d" -e 's/[^ ]* //' |
xargs -0r rm -f
For BSD, find doesn't have the -printf predicate, stat can't output NULL bytes, and sed + awk can't handle NULL-delimited records.
Here's a solution that doesn't support newlines in paths but that safeguards against them by filtering them out:
#!/bin/bash
n=5
find . -maxdepth 1 -type f ! -path $'*\n*' -exec stat -f '%.9Fm %N' {} + |
sort -nrt ' ' -k1,1 |
awk -v n="$n" -F'^[^ ]* ' 'NR > n {printf "%s%c", $2, 0}' |
xargs -0 rm -f
note: I'm using bash because of the $'\n' notation. For sh you can define a variable containing a literal newline and use it instead.
Solution for UNIX & Linux (inspired from AIX/HP-UX/SunOS/BSD/Linux ls -b):
Some platforms don't provide find -printf, nor stat, nor support NUL-delimited records with stat/sort/awk/sed/xargs. That's why using perl is probably the most portable way to tackle the problem, because it is available by default in almost every OS.
I could have written the whole thing in perl but I didn't. I only use it for substituting stat and for encoding-decoding-escaping the filenames. The core logic is the same as the previous solutions and is implemented with POSIX tools.
note: perl's default stat has a resolution of a second, but starting from perl-5.8.9 you can get sub-second resolution with the stat function of the module Time::HiRes (when both the OS and the filesystem support it). That's what I'm using here; if your perl doesn't provide it then you can remove the ‑MTime::HiRes=stat from the command line.
n=5
find . '(' -name '.' -o -prune ')' -type f -exec \
perl -MTime::HiRes=stat -le '
foreach (#ARGV) {
#st = stat($_);
if ( #st > 0 ) {
s/([\\\n])/sprintf( "\\%03o", ord($1) )/ge;
print sprintf( "%.9f %s", $st[9], $_ );
}
else { print STDERR "stat: $_: $!"; }
}
' {} + |
sort -nrt ' ' -k1,1 |
sed -e "1,${n}d" -e 's/[^ ]* //' |
perl -l -ne '
s/\\([0-7]{3})/chr(oct($1))/ge;
s/(["\n])/"\\$1"/g;
print "\"$_\"";
' |
xargs -E '' sh -c '[ "$#" -gt 0 ] && rm -f "$#"' sh
Explanations:
For each file found, the first perl gets the modification time and outputs it along the encoded filename (each newline and backslash characters are replaced with the literals \012 and \134 respectively).
Now each time filename is guaranteed to be single-line, so POSIX sort and sed can safely work with this stream.
The second perl decodes the filenames and escapes them for POSIX xargs.
Lastly, xargs calls rm for deleting the files. The sh command is a trick that prevents xargs from running rm when there's no files to delete.
I realize this is an old thread, but maybe someone will benefit from this. This command will find files in the current directory :
for F in $(find . -maxdepth 1 -type f -name "*_srv_logs_*.tar.gz" -printf '%T# %p\n' | sort -r -z -n | tail -n+5 | awk '{ print $2; }'); do rm $F; done
This is a little more robust than some of the previous answers as it allows to limit your search domain to files matching expressions. First, find files matching whatever conditions you want. Print those files with the timestamps next to them.
find . -maxdepth 1 -type f -name "*_srv_logs_*.tar.gz" -printf '%T# %p\n'
Next, sort them by the timestamps:
sort -r -z -n
Then, knock off the 4 most recent files from the list:
tail -n+5
Grab the 2nd column (the filename, not the timestamp):
awk '{ print $2; }'
And then wrap that whole thing up into a for statement:
for F in $(); do rm $F; done
This may be a more verbose command, but I had much better luck being able to target conditional files and execute more complex commands against them.
If the filenames don't have spaces, this will work:
ls -C1 -t| awk 'NR>5'|xargs rm
If the filenames do have spaces, something like
ls -C1 -t | awk 'NR>5' | sed -e "s/^/rm '/" -e "s/$/'/" | sh
Basic logic:
get a listing of the files in time order, one column
get all but the first 5 (n=5 for this example)
first version: send those to rm
second version: gen a script that will remove them properly
With zsh
Assuming you don't care about present directories and you will not have more than 999 files (choose a bigger number if you want, or create a while loop).
[ 6 -le `ls *(.)|wc -l` ] && rm *(.om[6,999])
In *(.om[6,999]), the . means files, the o means sort order up, the m means by date of modification (put a for access time or c for inode change), the [6,999] chooses a range of file, so doesn't rm the 5 first.
Adaptation of #mklement0's excellent answer with some parameters and without needing to navigate to the folder containing the files to be deleted...
TARGET_FOLDER="/my/folder/path"
FILES_KEEP=5
ls -tp "$TARGET_FOLDER"**/* | grep -v '/$' | tail -n +$((FILES_KEEP+1)) | xargs -d '\n' -r rm --
[Ref(s).: https://stackoverflow.com/a/3572628/3223785 ]
Thanks! 😉
found interesting cmd in Sed-Onliners - Delete last 3 lines - fnd it perfect for another way to skin the cat (okay not) but idea:
#!/bin/bash
# sed cmd chng #2 to value file wish to retain
cd /opt/depot
ls -1 MyMintFiles*.zip > BigList
sed -n -e :a -e '1,2!{P;N;D;};N;ba' BigList > DeList
for i in `cat DeList`
do
echo "Deleted $i"
rm -f $i
#echo "File(s) gonzo "
#read junk
done
exit 0
Removes all but the 10 latest (most recents) files
ls -t1 | head -n $(echo $(ls -1 | wc -l) - 10 | bc) | xargs rm
If less than 10 files no file is removed and you will have :
error head: illegal line count -- 0
To count files with bash
I needed an elegant solution for the busybox (router), all xargs or array solutions were useless to me - no such command available there. find and mtime is not the proper answer as we are talking about 10 items and not necessarily 10 days. Espo's answer was the shortest and cleanest and likely the most unversal one.
Error with spaces and when no files are to be deleted are both simply solved the standard way:
rm "$(ls -td *.tar | awk 'NR>7')" 2>&-
Bit more educational version: We can do it all if we use awk differently. Normally, I use this method to pass (return) variables from the awk to the sh. As we read all the time that can not be done, I beg to differ: here is the method.
Example for .tar files with no problem regarding the spaces in the filename. To test, replace "rm" with the "ls".
eval $(ls -td *.tar | awk 'NR>7 { print "rm \"" $0 "\""}')
Explanation:
ls -td *.tar lists all .tar files sorted by the time. To apply to all the files in the current folder, remove the "d *.tar" part
awk 'NR>7... skips the first 7 lines
print "rm \"" $0 "\"" constructs a line: rm "file name"
eval executes it
Since we are using rm, I would not use the above command in a script! Wiser usage is:
(cd /FolderToDeleteWithin && eval $(ls -td *.tar | awk 'NR>7 { print "rm \"" $0 "\""}'))
In the case of using ls -t command will not do any harm on such silly examples as: touch 'foo " bar' and touch 'hello * world'. Not that we ever create files with such names in real life!
Sidenote. If we wanted to pass a variable to the sh this way, we would simply modify the print (simple form, no spaces tolerated):
print "VarName="$1
to set the variable VarName to the value of $1. Multiple variables can be created in one go. This VarName becomes a normal sh variable and can be normally used in a script or shell afterwards. So, to create variables with awk and give them back to the shell:
eval $(ls -td *.tar | awk 'NR>7 { print "VarName=\""$1"\"" }'); echo "$VarName"
leaveCount=5
fileCount=$(ls -1 *.log | wc -l)
tailCount=$((fileCount - leaveCount))
# avoid negative tail argument
[[ $tailCount < 0 ]] && tailCount=0
ls -t *.log | tail -$tailCount | xargs rm -f
I made this into a bash shell script. Usage: keep NUM DIR where NUM is the number of files to keep and DIR is the directory to scrub.
#!/bin/bash
# Keep last N files by date.
# Usage: keep NUMBER DIRECTORY
echo ""
if [ $# -lt 2 ]; then
echo "Usage: $0 NUMFILES DIR"
echo "Keep last N newest files."
exit 1
fi
if [ ! -e $2 ]; then
echo "ERROR: directory '$1' does not exist"
exit 1
fi
if [ ! -d $2 ]; then
echo "ERROR: '$1' is not a directory"
exit 1
fi
pushd $2 > /dev/null
ls -tp | grep -v '/' | tail -n +"$1" | xargs -I {} rm -- {}
popd > /dev/null
echo "Done. Kept $1 most recent files in $2."
ls $2|wc -l
Modified version of the answer of #Fabien if you want to specify a path. Useful if you're running the script elsewhere.
ls -tr /path/foo/ | head -n -5 | xargs -I% --no-run-if-empty rm /path/foo/%

How to touch all files that are returned by a sorted ls?

If I have the following:
ls|sort -n
How would I touch all those files in the order of the sorted files? Something like:
ls|sort -n|touch
What would be the proper syntax? Note that I need to sort touch the files in the exact order they're being sorted -- as I'm trying to sort these files for a FAT reader with minimal metadata reading.
ls -1tr | while read file; do touch "$file"; sleep 1; done
If you want to preserve distance in modification time from one file to the next then call this instead:
upmodstamps() {
oldest_elapsed=$(( $(date +%s) - $(stat -c %Y "`ls -1tr|head -1`") ))
for file in *; do
oldstamp=$(stat -c %Y "$file")
newstamp=$(( $oldstamp + $oldest_elapsed ))
newstamp_fmt=$(date --date=#${newstamp} +'%Y%m%d%H%M.%S')
touch -t ${newstamp_fmt} "$file"
done
}
Note: date usage assumes GNU
You can use this command
(ls|sort -n >> list.txt )
touch $(cat list.txt)
OR
touch $(ls /path/to/dir | sort -n)
OR if you want to copy files instead of creating empty files use this command
cp list.txt ./DirectoryWhereYouWantToCopy
Try like this
touch $(ls | sort -n)
Can you give a few file name?
if you have file names with numbers as 1file, 10file, 11file .. 20file, then you need use --general-numeric-sort
ls | sort --general-numeric-sort --output=../workingDirectory/sortedFiles.txt
cat sortedFiles.txt
1file
10file
11file
12file
20file
and move sortedFile.txt into your working directory or where ever you want.
touch $(cat ../workingDirectory/sortedFiles.txt)
this will create empty files with the exact same name

Search, match and copy directories into another based on names in a txt file

My goal is copy a bulk of specific directories whose names are in a txt file as follows:
$ cat names.txt
raw1
raw2
raw3
raw4
raw5
These directories have subdirectories, hence it is important to copy all the contents. When I list in my terminal it looks like this:
$ ls -l
raw3
raw7
raw1
raw8
raw5
raw6
raw2
raw4
To perform this task, I have tried the following:
cat names.txt | while read line; do grep -l '$line' | xargs -r0 cp -t <desired_destination>; done
But, I get this mistake
cp: cannot stat No such file or directory
I suppose it's because the names in the file list (names.txt) don't match in sorting with the ones in the terminal. Notice that they are unsorted and by using while read line doesn't work. Thank you for taking the time and commitment to help me.
Having problems following the logic of the current code so in the name of K.I.S.S. I propose:
tgtdir=/my/target/directory
while read -r srcdir
do
[[ -d "${srcdir}" ]] && cp -rp "${srcdir}" "${tgtdir}"
done < <(tr -d '\r' < names.dat)
NOTES:
the < <(tr -d '\r' < names.dat) is used to remove windows/dos line endings from names.dat (per comments from OP); if names.dat is updated to remove the \r' then the tr -d with be a no-op (ie, bit of overhead to spawn the subprocess but the script should still read names.dat correctly)
assumes script is run from the directory where the source directories reside otherwise code can be modified to either cd to said directory or preface the ${srcdir} references with said directory
OP can add/modify the cp flags as needed, but I'm assuming at a minimum -r will be needed in order to recursively copy the directories
UUoC.
cat names.txt | while read line; do ...; done
is better written
while read line; do ...; done < names.txt
do grep -l '$LINE' | is eating your input.
printf "%s\n" 1 2 3 |while read line; do echo "Read: [$line]"; grep . | cat; done
Read: [1]
2
3
In your case, it is likely finding no lines that match the literal string $LINE which you have embedded in single-qote marks, which do not allow it to be parsed for content. Use "$line" (avoid capitals), and wouldn't be helpful even if it did match:
$: printf "%s\n" 1 2 3 | grep -l .
(standard input)
You didn't tell it what to read from, so -l is pointless since it's reading the same stdin stream that the read is.
I think what you want is a little simpler -
xargs cp -Rt /your/desired/target/directory/ < names.txt
Assuming you wanted to leave the originals where they were.

Bash script to move first N files with specific name

I'm trying to move only 100 files with a specific extensions (from the current directory to the parent directory), but the following attempt of mine does not work
for file in $(ls -U | grep *.txt | tail -100)
do
mv $file ../
done
Can you point me to the correct approach?
Since you didn't quote *.txt, the shell expanded it to all the filenames ending in .txt. So your command is something like:
ls -U | grep file1.txt file2.txt file3.txt ... | tail -100
Since grep has filename arguments, it ignores its standard input. It outputs all the lines matching file1.txt in the remaining files. There's probably no matches, so nothing is piped to tail -100. And even if there were matches, the output would be the lines from the files, not filenames, so it wouldn't be useful for the mv command.
You can loop over the filenames directly, and use a counter variable to stop after 100 files.
counter=0
for file in *.txt
do
if (( counter >= 100 ))
then break
fi
mv "$file" ../
((counter++))
done
This avoids the pitfalls of parsing the output of ls.
this will do the job:
ls -U *.txt | tail -100 | while read filename; do mv "$filename" ../; done
while read filename respect spaces in the filename.
Run this in the text file directory:
#!/bin/bash
for txt_file in ./*.txt; do
((c++==100)) && break
mv "$txt_file" ../
done

Printing the number of lines

I have a directory that contains only .txt files. I want to print the number of lines for every file. When I write cat file.txt | wc -l the number of lines appears but when I want to make a script it's more complicated. I have this code:
for fis in `ls -R $1`
do
echo `cat $fis | wc -l`
done
I tried: wc -l $fis , with awk,grep and it doesn't work. It tells that:
cat: fis1: No such file or directory
0
How can I do to print the number of lines?
To find files recursively in subdirectories, use the find command, not ls -R, which is mainly intended for human reading.
find "$1" -type f -exec wc -l {} +
The problems with looping over the output of ls -R are:
Filenames with whitespace won't be parsed correctly.
It prints other output beside just the filenames.
Not the problem here, but the echo command is more than needed:
You can use
wc -l "${fis}"
What goes wrong?
You have a subdir called fis1. Look to the output of ls:
# ls -R fis1
fis1:
file1_in_fis1.txt
When you are parsing this output, your script will try
echo `cat fis1: | wc -l`
The cat will tell you No such file or directory and wc counts 0.
As #Barmar explained, ls prints additional output you do not want.
Do not try to patch your attempt by | grep .txt and if [ -f "${fis}"]; then .., these will fail with filename with spaces.txt. So use find or shopt (and accept the answer of #Barmar or #Cyrus).

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