I have a slight problem with matching file names.
I have one text file that contains some 160 names. I have a folder with 2000+ files. and some of them contains these 160 names. I am looking for a grep cmd that can take each name in the text file and try to match it to the contents of the folder.
I am trying to do this in perl, or just straight forward linux cmds, but neither has worked out very well for me because I am not familiar with either of them.
so for example: the text file contains
abc acc eee fff
and the folder will have abcXXX, accXXX, eeeXXX and fffXXX
I need to sort through the list and find out which one were missing.
thx
Davy
If you search in the content of the files :
#!/bin/sh
for i in `cat files`
do
grep -R $i folder --color
done
and if you search in the filename of the files :
#!/bin/sh
for i in `cat files`
do
find . -name $i*
done
for file in $(< list);
do
[ ! -f ${file}xxx ] && echo "x: " ${file}xxx
done
list is the file, containing the list of filenames "abc acc ...".
< is redirection - so we read from the file 'list', the same as $(cat list). If the file isn't named 'list', just replace the name.
file is declared in that statement and iteratively bound to all those entries in 'list'. Later it is used as ${file}.
[ ! -f ${file}xxx ] is a test, whether a -f(ile) exists, for abc it searchs for a file abcxxx.
But ! negates the search, so if no such file exists, then echo ... is called. "x: " is just a debug relict.
We can improve that part:
for file in $(< list);
do
[ -f ${file}xxx ] || echo ${file}xxx
done
instead of 'NOT x AND y' we can write 'x OR y' - the meaning is the same, just shorter: the file does exist or echo its name.
|| is short-circuit OR.
If you can arrange for the text file to have each name on a separate line then the following command will do what you need:
ls myfolder | grep -f mytextfile
One way to get each name on a separate line in the text file would be to edit a copy in vi and issue the commands:
:%s/ /^V^M/g
:wq
(^V^M means type "control-v" then "control-m")
Related
I have 5 big text files in a directory with millions of records delimited by pipe. All I want to do is, when I run the BASH script it should create a header on the first line like this:
TCR1|A|B|C|D|E|F|# of records
and the first word(TCR) is the new name of the file and last one is the number of records. Both of them should change with respect to each text file. So, when I run the script once, it should find the 5 text files in the directory and script as mentioned above. The output should look like this in each text file.
a.txt
TCR1|A|B|C|D|E|F|# of records in first text file
b.txt
TCR2|A|B|C|D|E|F|# of records in second text file
c.txt
TCR3|A|B|C|D|E|F|# of records in third text file
d.txt
TCR4|A|B|C|D|E|F|# of records in fourth text file
e.txt
TCR5|A|B|C|D|E|F|# of records in fifth text file
I think this is probably what you mean, though your question is very poorly posed:
#!/bin/bash
# Don't crash if no text files present and allow upper/lowercase "txt/TXT"
shopt -s nullglob nocaseglob
# Declare "lines" to be numeric, rather than string
declare -i lines
for f in *.txt; do
lines=$(wc -l < "$f")
echo "$f|A|B|C|D|E|F|$lines"
cat "$f"
done
I don't understand the TCR thing, but maybe this is what you want:
#!/bin/bash
# Declare "lines" to be numeric, rather than string
declare -i lines
for f in *.txt; do
lines=$(wc -l < "$f")
TCRthing="unknown"
[ "$f" == "a.txt" ] && TCRthing="TCR1"
[ "$f" == "b.txt" ] && TCRthing="TCR2"
[ "$f" == "c.txt" ] && TCRthing="TCR3"
[ "$f" == "d.txt" ] && TCRthing="TCR4"
[ "$f" == "e.txt" ] && TCRthing="TCR5"
echo "$TCRthing|A|B|C|D|E|F|$lines"
cat "$f"
done
Note that there are simpler, more idiomatic ways of doing this, for example, you could just run:
more *.txt
and then press CtrlG to get status as to which file you are viewing and where you have reached and how many lines each file is. You can also press :n to move to the next file and :p to move to the previous file. And 1G to go back to top of current file and G to go to bottom of current file.
I have a folder that is full of .bak files and some other files also. I need to remove the extension of all .bak files in that folder. How do I make a command which will accept a folder name and then remove the extension of all .bak files in that folder ?
Thanks.
To remove a string from the end of a BASH variable, use the ${var%ending} syntax. It's one of a number of string manipulations available to you in BASH.
Use it like this:
# Run in the same directory as the files
for FILENAME in *.bak; do mv "$FILENAME" "${FILENAME%.bak}"; done
That works nicely as a one-liner, but you could also wrap it as a script to work in an arbitrary directory:
# If we're passed a parameter, cd into that directory. Otherwise, do nothing.
if [ -n "$1" ]; then
cd "$1"
fi
for FILENAME in *.bak; do mv "$FILENAME" "${FILENAME%.bak}"; done
Note that while quoting your variables is almost always a good practice, the for FILENAME in *.bak is still dangerous if any of your filenames might contain spaces. Read David W.'s answer for a more-robust solution, and this document for alternative solutions.
There are several ways to remove file suffixes:
In BASH and Kornshell, you can use the environment variable filtering. Search for ${parameter%word} in the BASH manpage for complete information. Basically, # is a left filter and % is a right filter. You can remember this because # is to the left of %.
If you use a double filter (i.e. ## or %%, you are trying to filter on the biggest match. If you have a single filter (i.e. # or %, you are trying to filter on the smallest match.
What matches is filtered out and you get the rest of the string:
file="this/is/my/file/name.txt"
echo ${file#*/} #Matches is "this/` and will print out "is/my/file/name.txt"
echo ${file##*/} #Matches "this/is/my/file/" and will print out "name.txt"
echo ${file%/*} #Matches "/name.txt" and will print out "/this/is/my/file"
echo ${file%%/*} #Matches "/is/my/file/name.txt" and will print out "this"
Notice this is a glob match and not a regular expression match!. If you want to remove a file suffix:
file_sans_ext=${file%.*}
The .* will match on the period and all characters after it. Since it is a single %, it will match on the smallest glob on the right side of the string. If the filter can't match anything, it the same as your original string.
You can verify a file suffix with something like this:
if [ "${file}" != "${file%.bak}" ]
then
echo "$file is a type '.bak' file"
else
echo "$file is not a type '.bak' file"
fi
Or you could do this:
file_suffix=$(file##*.}
echo "My file is a file '.$file_suffix'"
Note that this will remove the period of the file extension.
Next, we will loop:
find . -name "*.bak" -print0 | while read -d $'\0' file
do
echo "mv '$file' '${file%.bak}'"
done | tee find.out
The find command finds the files you specify. The -print0 separates out the names of the files with a NUL symbol -- which is one of the few characters not allowed in a file name. The -d $\0means that your input separators are NUL symbols. See how nicely thefind -print0andread -d $'\0'` together?
You should almost never use the for file in $(*.bak) method. This will fail if the files have any white space in the name.
Notice that this command doesn't actually move any files. Instead, it produces a find.out file with a list of all the file renames. You should always do something like this when you do commands that operate on massive amounts of files just to be sure everything is fine.
Once you've determined that all the commands in find.out are correct, you can run it like a shell script:
$ bash find.out
rename .bak '' *.bak
(rename is in the util-linux package)
Caveat: there is no error checking:
#!/bin/bash
cd "$1"
for i in *.bak ; do mv -f "$i" "${i%%.bak}" ; done
You can always use the find command to get all the subdirectories
for FILENAME in `find . -name "*.bak"`; do mv --force "$FILENAME" "${FILENAME%.bak}"; done
I just downloaded about 600 files from my server and need to remove the last 11 characters from the filename (not including the extension). I use Ubuntu and I am searching for a command to achieve this.
Some examples are as follows:
aarondyne_kh2_13thstruggle_or_1250556383.mus should be renamed to aarondyne_kh2_13thstruggle_or.mus
aarondyne_kh2_darknessofunknow_1250556659.mp3 should be renamed to aarondyne_kh2_darknessofunknow.mp3
It seems that some duplicates might exist after I do this, but if the command fails to complete and tells me what the duplicates would be, I can always remove those manually.
Try using the rename command. It allows you to rename files based on a regular expression:
The following line should work out for you:
rename 's/_\d+(\.[a-z0-9A-Z]+)$/$1/' *
The following changes will occur:
aarondyne_kh2_13thstruggle_or_1250556383.mus renamed as aarondyne_kh2_13thstruggle_or.mus
aarondyne_kh2_darknessofunknow_1250556659.mp3 renamed as aarondyne_kh2_darknessofunknow.mp3
You can check the actions rename will do via specifying the -n flag, like this:
rename -n 's/_\d+(\.[a-z0-9A-Z]+)$/$1/' *
For more information on how to use rename simply open the manpage via: man rename
Not the prettiest, but very simple:
echo "$filename" | sed -e 's!\(.*\)...........\(\.[^.]*\)!\1\2!'
You'll still need to write the rest of the script, but it's pretty simple.
find . -type f -exec sh -c 'mv {} `echo -n {} | sed -E -e "s/[^/]{10}(\\.[^\\.]+)?$/\\1/"`' ";"
one way to go:
you get a list of your files, one per line (by ls maybe) then:
ls....|awk '{o=$0;sub(/_[^_.]*\./,".",$0);print "mv "o" "$0}'
this will print the mv a b command
e.g.
kent$ echo "aarondyne_kh2_13thstruggle_or_1250556383.mus"|awk '{o=$0;sub(/_[^_.]*\./,".",$0);print "mv "o" "$0}'
mv aarondyne_kh2_13thstruggle_or_1250556383.mus aarondyne_kh2_13thstruggle_or.mus
to execute, just pipe it to |sh
I assume there is no space in your filename.
This script assumes each file has just one extension. It would, for instance, rename "foo.something.mus" to "foo.mus". To keep all extensions, remove one hash mark (#) from the first line of the loop body. It also assumes that the base of each filename has at least 12 character, so that removing 11 doesn't leave you with an empty name.
for f in *; do
ext=${f##*.}
new_f=${base%???????????.$ext}
if [ -f "$new_f" ]; then
echo "Will not rename $f, $new_f already exists" >&2
else
mv "$f" "$new_f"
fi
done
On my computer running Ubuntu, I have a folder full of hundreds files all named "index.html.n" where n starts at one and continues upwards. Some of those files are actual html files, some are image files (png and jpg), and some of them are zip files.
My goal is to permanently remove every single file except the zip archives. I assume it's some combination of rm and file, but I'm not sure of the exact syntax.
If it fits into your argument list and no filenames contain colon a simple pipe with xargs should do:
file * | grep -vi zip | cut -d: -f1 | tr '\n' '\0' | xargs -0 rm
First find to find matching file, then file to get file types. sed eliminates other file types and also removes everything but the filenames from the output of file. lastly, rm for deleting:
find -name 'index.html.[0-9]*' | \
xargs file | \
sed -n 's/\([^:]*\): Zip archive.*/\1/p' |
xargs rm
I would run:
for f in in index.html.*
do
file "$f" | grep -qi zip
[ $? -ne 0 ] && rm -i "$f"
done
and remove -i option if you feel confident enough
Here's the approach I'd use; it's not entirely automated, but it's less error-prone than some other approaches.
file * > cleanup.sh
or
file index.html.* > cleanup.sh
This generates a list of all files (excluding dot files), or of all index.html.* files, in your current directory and writes the list to cleanup.sh.
Using your favorite text editor (mine happens to be vim), edit cleanup.sh:
Add #!/bin/sh as the first line
Delete all lines containing the string "Zip archive"
On each line, delete everything from the : to the end of the line (in vim, :%s/:.*$//)
Replace the beginning of each line with "rm" followed by a space
Exit your editor, updating the file.
chmod +x cleanup.sh
You should now have a shell script that will delete everything except zip files.
Carefully inspect the script before running it. Look out for typos, and for files whose names contain shell metacharacters. You might need to add quotation marks to the file names.
(Note that if you do this as a one-line shell command, you don't have the opportunity to inspect the list of files you're going to delete before you actually delete them.)
Once you're satisfied that your script is correct, run
./cleanup.sh
from your shell prompt.
for i in index.html.*
do
$type = file $i;
if [[ ! $file =~ "Zip" ]]
then
rm $file
fi
done
Change the rm to a ls for testing purposes.
Let's say I have the following files in my current directory:
1.jpg
1original.jpg
2.jpg
2original.jpg
3.jpg
4.jpg
Is there a terminal/bash/linux command that can do something like
if the file [an integer]original.jpg exists,
then move [an integer].jpg and [an integer]original.jpg to another directory.
Executing such a command will cause 1.jpg, 1original.jpg, 2.jpg and 2original.jpg to be in their own directory.
NOTE
This doesn't have to be one command. I can be a combination of simple commands. Maybe something like copy original files to a new directory. Then do some regular expression filter on files in the newdir to get a list of file names from old directory that still need to be copied over etc..
Turning on extended glob support will allow you to write a regular-expression-like pattern. This can handle files with multi-digit integers, such as '87.jpg' and '87original.jpg'. Bash parameter expansion can then be used to strip "original" from the name of a found file to allow you to move the two related files together.
shopt -s extglob
for f in +([[:digit:]])original.jpg; do
mv $f ${f/original/} otherDirectory
done
In an extended pattern, +( x ) matches one or more of the things inside the parentheses, analogous to the regular expression x+. Here, x is any digit. Therefore, we match all files in the current directory whose name consists of 1 or more digits followed by "original.jpg".
${f/original/} is an example of bash's pattern substitution. It removes the first occurrence of the string "original" from the value of f. So if f is the string "1original.jpg", then ${f/original/} is the string "1.jpg".
well, not directly, but it's an oneliner (edit: not anymore):
for i in [0-9].jpg; do
orig=${i%.*}original.jpg
[ -f $orig ] && mv $i $orig another_dir/
done
edit: probably I should point out my solution:
for i in [0-9].jpg: execute the loop body for each jpg file with one number as filename. store whole filename in $i
orig={i%.*}original.jpg: save in $orig the possible filename for the "original file"
[ -f $orig ]: check via test(1) (the [ ... ] stuff) if the original file for $i exists. if yes, move both files to another_dir. this is done via &&: the part after it will be only executed if the test was successful.
This should work for any strictly numeric prefix, i.e. 234.jpg
for f in *original.jpg; do
pre=${f%original.jpg}
if [[ -e "$pre.jpg" && "$pre" -eq "$pre" ]] 2>/dev/null; then
mv "$f" "$pre.jpg" targetDir
fi
done
"$pre" -eq "$pre" gives an error if not integer
EDIT:
this fails if there exist original.jpg and .jpg both.
$pre is then nullstring and "$pre" -eq "$pre" is true.
The following would work and is easy to understand (replace out with the output directory, and {1..9} with the actual range of your numbers.
for x in {1..9}
do
if [ -e ${x}original.jpg ]
then
mv $x.jpg out
mv ${x}original.jpg out
fi
done
You can obviously also enter it as a single line.
You can use Regex statements to find "matches" in the files names that you are looking through. Then perform your actions on the "matches" you find.
integer=0; while [ $integer -le 9 ] ; do if [ -e ${integer}original.jpg ] ; then mv -vi ${integer}.jpg ${integer}original.jpg lol/ ; fi ; integer=$[ $integer + 1 ] ; done
Note that here, "lol" is the destination directory. You can change it to anything you like. Also, you can change the 9 in while [ $integer -le 9 ] to check integers larger than 9. Right now it starts at 0* and stops after checking 9*.
Edit: If you want to, you can replace the semicolons in my code with carriage returns and it may be easier to read. Also, you can paste the whole block into the terminal this way, even if that might not immediately be obvious.