import org.apache.spark.sql.functions.lit
val containsString = (haystack:String, needle:String) =>{
if (haystack.contains(needle)){
1
}
else{
0
}
}
val containsStringUDF = udf(containsString _)
val new_df = df.withColumn("nameContainsxyz", containsStringUDF($"name"),lit("xyz")))
I am new to Spark scala. The above code seems to compile successfully. However, when I try to run
new_df.groupBy("nameContainsxyz").sum().show()
The error throws out. Could someone help me out? The error message is below.
Caused by: org.apache.spark.SparkException: Failed to execute user defined function($anonfun$1: (string, string) => int)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage6.agg_doAggregateWithKeys_0$(Unknown Source)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage6.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$15$$anon$2.hasNext(WholeStageCodegenExec.scala:655)
at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:409)
at org.apache.spark.shuffle.sort.BypassMergeSortShuffleWriter.write(BypassMergeSortShuffleWriter.java:125)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:99)
at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:55)
at org.apache.spark.scheduler.Task.run(Task.scala:121)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:408)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1405)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:414)
... 3 more
Caused by: java.lang.NullPointerException
at $anonfun$1.apply(<console>:41)
at $anonfun$1.apply(<console>:40)
... 15 more
Just an update: the error throws out because some of the rows in the specified column is null. Adding null check in the UDF completely solved the issue.
Thanks
If I understand what you're trying to do correctly, you want to know how many rows there are in which 'xyz' appears in column name?
You can do that without using a UDF:
df.filter('name.contains("xyz")). count
Related
This is my code snippet. I am getting following exception when spar.sql(query) is getting executed.
My table_v2 has 262 columns. My table_v3 has 9 columns.
Can someone faced similar issue and help to resolve this? TIA
spark = SparkSession.builder.enableHiveSupport().getOrCreate()
sc=spark.sparkContext
df1 = spark.sql("select * from myDB.table_v2")
df2 = spark.sql("select * from myDB.table_v3")
result_df = df1.join(df2, (df1.id_c == df2.id_c) & (df1.cycle_r == df2.cycle_r) & (df1.consumer_r == df2.consumer_r))
final_result_df = result_df.select(df1["*"])
final_result_df.distinct().createOrReplaceTempView("results")
query = "INSERT INTO TABLE myDB.table_v2_final select * from results"
spark.sql(query);
I tried to set the parameter in conf and it did not help to resolve the issue:
spark.sql.debug.maxToStringFields=500
Error:
20/12/16 19:28:20 ERROR FileFormatWriter: Job job_20201216192707_0002 aborted.
20/12/16 19:28:20 ERROR Executor: Exception in task 90.0 in stage 2.0 (TID 225)
org.apache.spark.SparkException: Task failed while writing rows.
at org.apache.spark.sql.execution.datasources.FileFormatWriter$.org$apache$spark$sql$execution$datasources$FileFormatWriter$$executeTask(FileFormatWriter.scala:285)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$write$1.apply(FileFormatWriter.scala:197)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$write$1.apply(FileFormatWriter.scala:196)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:109)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:345)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.lang.IllegalArgumentException: Missing required char ':' at 'struct<>
at org.apache.orc.TypeDescription.requireChar(TypeDescription.java:293)
at org.apache.orc.TypeDescription.parseStruct(TypeDescription.java:326)
at org.apache.orc.TypeDescription.parseType(TypeDescription.java:385)
at org.apache.orc.TypeDescription.fromString(TypeDescription.java:406)
at org.apache.spark.sql.execution.datasources.orc.OrcSerializer.org$apache$spark$sql$execution$datasources$orc$OrcSerializer$$createOrcValue(OrcSerializer.scala:226)
at org.apache.spark.sql.execution.datasources.orc.OrcSerializer.<init>(OrcSerializer.scala:36)
at org.apache.spark.sql.execution.datasources.orc.OrcOutputWriter.<init>(OrcOutputWriter.scala:36)
at org.apache.spark.sql.execution.datasources.orc.OrcFileFormat$$anon$1.newInstance(OrcFileFormat.scala:108)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$SingleDirectoryWriteTask.newOutputWriter(FileFormatWriter.scala:367)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$SingleDirectoryWriteTask.execute(FileFormatWriter.scala:378)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$org$apache$spark$sql$execution$datasources$FileFormatWriter$$executeTask$3.apply(FileFormatWriter.scala:269)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$$anonfun$org$apache$spark$sql$execution$datasources$FileFormatWriter$$executeTask$3.apply(FileFormatWriter.scala:267)
at org.apache.spark.util.Utils$.tryWithSafeFinallyAndFailureCallbacks(Utils.scala:1415)
at org.apache.spark.sql.execution.datasources.FileFormatWriter$.org$apache$spark$sql$execution$datasources$FileFormatWriter$$executeTask(FileFormatWriter.scala:272)
... 8 more
I have dropped my myDB.table_v2_final and modified the below line in my code and it worked.
I suspect there might be some issue in the way I created the table.
query = "create external table myDB.table_v2_final as select * from results"
I am doing DataFrames and DataSets exercises with spark in Jupyter and I have run into a problem. When carrying out a filter for those houses with a price higher than $ 120,000 I find an error that only gives me when I run it through Jupyter with Spylon-Kernel (version 0.4.1) and it is that I don't lets apply the filter function receiving a house as a parameter while if I do it from the spark-shell terminal it works and I don't understand why. Attached images and code:
Code
case class House (id: Int, city: String, price: Int)
val houseDF = Seq(House(1,"Paris", 120000),
House(2,"Paris", 150000), House(3,"Berlin", 138000),
House(4,"Berlin", 160000), House(5,"Madrid", 110000),
House(6,"Madrid", 125000), House(7,"Paris", 140000),
House(8,"Madrid", 150000), House(9,"Berlin", 125000),
House(10,"Berlin", 132000)).toDF
val houseDS = houseDF.as[House]
houseDS.filter( houseDS("price") > 120000).show(5) // This work :)
houseDS.filter(house => house.price > 120000).show(5) // This not work :(
Error:
org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 0.0 failed 1 times, most recent failure: Lost task 0.0 in stage 0.0 (TID 0, 192.168.1.20, executor driver): java.lang.ClassCastException: $iw cannot be cast to $iw
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:729)
at org.apache.spark.sql.execution.SparkPlan.$anonfun$getByteArrayRdd$1(SparkPlan.scala:340)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:872)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:872)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:349)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:313)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:127)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:446)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1377)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:449)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.failJobAndIndependentStages(DAGScheduler.scala:2059)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2(DAGScheduler.scala:2008)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$abortStage$2$adapted(DAGScheduler.scala:2007)
at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:2007)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1(DAGScheduler.scala:973)
at org.apache.spark.scheduler.DAGScheduler.$anonfun$handleTaskSetFailed$1$adapted(DAGScheduler.scala:973)
at scala.Option.foreach(Option.scala:407)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:973)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:2239)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2188)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:2177)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:49)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:775)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2099)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2120)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2139)
at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:467)
at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:420)
at org.apache.spark.sql.execution.CollectLimitExec.executeCollect(limit.scala:47)
at org.apache.spark.sql.Dataset.collectFromPlan(Dataset.scala:3627)
at org.apache.spark.sql.Dataset.$anonfun$head$1(Dataset.scala:2697)
at org.apache.spark.sql.Dataset.$anonfun$withAction$1(Dataset.scala:3618)
at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$5(SQLExecution.scala:100)
at org.apache.spark.sql.execution.SQLExecution$.withSQLConfPropagated(SQLExecution.scala:160)
at org.apache.spark.sql.execution.SQLExecution$.$anonfun$withNewExecutionId$1(SQLExecution.scala:87)
at org.apache.spark.sql.SparkSession.withActive(SparkSession.scala:764)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:64)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:3616)
at org.apache.spark.sql.Dataset.head(Dataset.scala:2697)
at org.apache.spark.sql.Dataset.take(Dataset.scala:2904)
at org.apache.spark.sql.Dataset.getRows(Dataset.scala:300)
at org.apache.spark.sql.Dataset.showString(Dataset.scala:337)
at org.apache.spark.sql.Dataset.show(Dataset.scala:824)
at org.apache.spark.sql.Dataset.show(Dataset.scala:783)
... 37 elided
Caused by: java.lang.ClassCastException: $iw cannot be cast to $iw
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anon$1.hasNext(WholeStageCodegenExec.scala:729)
at org.apache.spark.sql.execution.SparkPlan.$anonfun$getByteArrayRdd$1(SparkPlan.scala:340)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2(RDD.scala:872)
at org.apache.spark.rdd.RDD.$anonfun$mapPartitionsInternal$2$adapted(RDD.scala:872)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:52)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:349)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:313)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:127)
at org.apache.spark.executor.Executor$TaskRunner.$anonfun$run$3(Executor.scala:446)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1377)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:449)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Screenshots
I don't know if it will be something from Jupyter, something from the Kernel (Spylon) or no idea.
Thank you very much to all!!
I've seen similar problems with regards to case classes that are defined directly in a cell.
try replacing the cell that defines House with:
object X {
case class House (id: Int, city: String, price: Int)
}
import X._
Alternatively, if you define House in a separate jar, and add that jar to the CLASSPATH, I think it will also work
I am new to spark. So bear with me.
Here is what I am trying to do:
I read entries from CSV file and check if the entry is present in the database and insert if not present. I don't want to use rdd.write.jdbc option because i think it will write entire dataframe.
I am using mapPartition and trying to initialise the postgres connection with psycopg2 library as follows:
def save_to_db(records):
import psycopg2
from psycopg2.extensions import AsIs
url = 'postgres://postgres:#127.0.0.1:5432/spark_learn'
conn = psycopg2.connect(url)
conn.autocommit = True
cursor = conn.cursor()
for record in records:
columns = record.keys()
values = [record[key] for key in columns]
cursor.execute("INSERT INTO heroes (%s) VALUES %s", (AsIs(','.join(columns)), tuple(values)))
return records
But I am getting the error as follows:
Caused by: org.apache.spark.SparkException: Python worker exited unexpectedly (crashed)
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator$$anonfun$3.applyOrElse(PythonRunner.scala:486)
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator$$anonfun$3.applyOrElse(PythonRunner.scala:475)
at scala.runtime.AbstractPartialFunction.apply(AbstractPartialFunction.scala:36)
at org.apache.spark.api.python.PythonRunner$$anon$1.read(PythonRunner.scala:593)
at org.apache.spark.api.python.PythonRunner$$anon$1.read(PythonRunner.scala:571)
at org.apache.spark.api.python.BasePythonRunner$ReaderIterator.hasNext(PythonRunner.scala:406)
at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)
at scala.collection.Iterator$class.foreach(Iterator.scala:891)
at org.apache.spark.InterruptibleIterator.foreach(InterruptibleIterator.scala:28)
at scala.collection.generic.Growable$class.$plus$plus$eq(Growable.scala:59)
at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:104)
at scala.collection.mutable.ArrayBuffer.$plus$plus$eq(ArrayBuffer.scala:48)
at scala.collection.TraversableOnce$class.to(TraversableOnce.scala:310)
at org.apache.spark.InterruptibleIterator.to(InterruptibleIterator.scala:28)
at scala.collection.TraversableOnce$class.toBuffer(TraversableOnce.scala:302)
at org.apache.spark.InterruptibleIterator.toBuffer(InterruptibleIterator.scala:28)
at scala.collection.TraversableOnce$class.toArray(TraversableOnce.scala:289)
at org.apache.spark.InterruptibleIterator.toArray(InterruptibleIterator.scala:28)
at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$13.apply(RDD.scala:945)
at org.apache.spark.rdd.RDD$$anonfun$collect$1$$anonfun$13.apply(RDD.scala:945)
at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:2101)
at org.apache.spark.SparkContext$$anonfun$runJob$5.apply(SparkContext.scala:2101)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:90)
at org.apache.spark.scheduler.Task.run(Task.scala:121)
at org.apache.spark.executor.Executor$TaskRunner$$anonfun$10.apply(Executor.scala:402)
at org.apache.spark.util.Utils$.tryWithSafeFinally(Utils.scala:1360)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:408)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
... 1 more
Caused by: java.io.EOFException
at java.io.DataInputStream.readInt(DataInputStream.java:392)
at org.apache.spark.api.python.PythonRunner$$anon$1.read(PythonRunner.scala:578)
... 26 more
Pls help me in this.
I am writing a DataSource that implements SupportsScanColumnarBatch, SupportsPushDownFilters, and SupportsPushDownRequiredColumns.
I am getting with an ArrayIndexOutOfBoundsException deep inside of Spark after populating a ColumnarBatch with the same number of ColumnVectors as the length of requiredSchema provided in the pruneColumns override.
I suspect that Spark is looking for as many ColumnVectors as the column schema returned by readSchema override instead of using the schema provided by pruneColumns.
Doing a "select * from dft" works fine since the schema lengths are the same -- 15 columns in my test case. Anything less (e.g., "select col1, col2 from dft") returns the following stack trace, where it is clear that Spark is looking for more columns.
java.lang.ArrayIndexOutOfBoundsException: 2
at org.apache.spark.sql.vectorized.ColumnarBatch.column(ColumnarBatch.java:98)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.datasourcev2scan_nextBatch_0$(Unknown Source)
at org.apache.spark.sql.catalyst.expressions.GeneratedClass$GeneratedIteratorForCodegenStage1.processNext(Unknown Source)
at org.apache.spark.sql.execution.BufferedRowIterator.hasNext(BufferedRowIterator.java:43)
at org.apache.spark.sql.execution.WholeStageCodegenExec$$anonfun$10$$anon$1.hasNext(WholeStageCodegenExec.scala:614)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:253)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:247)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:830)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:830)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:288)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:109)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:345)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
Any clues how I can get around this? For the time being, in order to get things to continue to run, I am ignoring the pruneColumns call and returning everything.
I solved it, but it seems like a bit of a kludge.
What I did was create a ColumnVector array of the same length as the original schema (not the pruned columns), and ONLY populated the pruned columns, leaving the others in their original allocated state.
For example, if only columns with indexes 0, 5, and 9 of the original schema are in the pruned list, this is all that is required.
var cva = new Array[ColumnVector](schema.length)
cva(0).putLongs(...)
cva(5).putInts(...)
cva(9).putFloats(...)
var batch = new ColumnarBatch(cva)
...
Found a saner approach...
In your implementation of SupportsPushDownRequiredColumns let the readSchema() method return the same StructType you are getting in the pruneColumns() call!
Basically feedback what you got from Spark!
HTH
I am using following code to create dataframe from RDD. I am able to perform operations on RDD and RDD is not empty.
I tried out following two approaches.
With both I am getting same exception.
Approach 1: Build dataset using sparkSession.createDataframe().
System.out.println("RDD Count: " + rdd.count());
Dataset<Row> rows = applicationSession
.getSparkSession().createDataFrame(rdd, data.getSchema()).toDF(data.convertListToSeq(data.getColumnNames()));
rows.createOrReplaceTempView(createStagingTableName(sparkTableName));
rows.show();
rows.printSchema();
Approach 2: Use Hive Context to create dataset.
System.out.println("RDD Count: " + rdd.count());
System.out.println("Create view using HiveContext..");
Dataset<Row> rows = applicationSession.gethiveContext().applySchema(rdd, data.getSchema());
I am able to print schema for above dataset using both apporaches.
Not sure what exactly causing null pointer exception.
Show() method internally invokes take() method which is throwing null pointer exception.
But why this dataset is populated as NULL? if RDD contains values then it should not be null.
This is a strange behaviour.
Below are logs for the same.
RDD Count: 35
Also I am able to run above code in local mode without any exception it is working fine.
As soon as I deploy this code on Yarn I start getting following exception.
I am able to create dataframe even I am able to register view for the same.
As soon as I perfrom rows.show() or rows.count() operation on this dataset I am getting following error.
Driver stacktrace:
at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1517)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1505)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1504)
at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1504)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:814)
at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:814)
at scala.Option.foreach(Option.scala:257)
at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:814)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1732)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1687)
at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1676)
at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48)
at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:630)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2029)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2050)
at org.apache.spark.SparkContext.runJob(SparkContext.scala:2069)
at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:336)
at org.apache.spark.sql.execution.CollectLimitExec.executeCollect(limit.scala:38)
at org.apache.spark.sql.Dataset.org$apache$spark$sql$Dataset$$collectFromPlan(Dataset.scala:2861)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2150)
at org.apache.spark.sql.Dataset$$anonfun$head$1.apply(Dataset.scala:2150)
at org.apache.spark.sql.Dataset$$anonfun$55.apply(Dataset.scala:2842)
at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:65)
at org.apache.spark.sql.Dataset.withAction(Dataset.scala:2841)
at org.apache.spark.sql.Dataset.head(Dataset.scala:2150)
at org.apache.spark.sql.Dataset.take(Dataset.scala:2363)
at org.apache.spark.sql.Dataset.showString(Dataset.scala:241)
at org.apache.spark.sql.Dataset.show(Dataset.scala:637)
at org.apache.spark.sql.Dataset.show(Dataset.scala:596)
at org.apache.spark.sql.Dataset.show(Dataset.scala:605)
Caused by: java.lang.NullPointerException
at org.apache.spark.sql.SparkSession$$anonfun$3.apply(SparkSession.scala:469)
at org.apache.spark.sql.SparkSession$$anonfun$3.apply(SparkSession.scala:469)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:409)
at scala.collection.Iterator$$anon$11.next(Iterator.scala:409)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:235)
at org.apache.spark.sql.execution.SparkPlan$$anonfun$2.apply(SparkPlan.scala:228)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:827)
at org.apache.spark.rdd.RDD$$anonfun$mapPartitionsInternal$1$$anonfun$apply$25.apply(RDD.scala:827)
at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)
at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)
at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)
at org.apache.spark.scheduler.Task.run(Task.scala:108)
at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:338)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
at java.lang.Thread.run(Thread.java:748)
Am I doing anything wrong here?
Please suggest.
Can you post the schema for dataframe? Issue is with schema string you are using and separator that you are using to split the schema string.