I am trying to change the column names to lowercase in a csv file. I found the code to do that online but I dont know how to replace the old column names(uppercase) with new column names(lowercase) in the original file. I did something like this:
$cat head -n1 xxx.csv | tr "[A-Z]" "[a-z]"
But it simply just prints out the column names in lowercase, which is not enough for me.
I tried to add sed -i but it did not do any good. Thanks!!
Using awk (readability winner) :
concise way:
awk 'NR==1{print tolower($0);next}1' file.csv
or using ternary operator:
awk '{print (NR==1) ? tolower($0): $0}' file.csv
or using if/else statements:
awk '{if (NR==1) {print tolower($0)} else {print $0}}' file.csv
To change the file for real:
awk 'NR==1{print tolower($0);next}1' file.csv | tee /tmp/temp
mv /tmp/temp file.csv
For your information, sed using the in place edit switch -i do the same: it use a temporary file under the hood.
You can check this by using :
strace -f -s 800 sed -i'' '...' file
Using perl:
perl -i -pe '$_=lc() if $.==1' file.csv
It replace the file on the fly with -i switch
You can use sed to tell it to replace the first line with all lower-case and then print the rest as-is:
sed '1s/.*/\L&/' ./xxx.csv
Redirect the output or use -i to do an in-place edit.
Proof of Concept
$ echo -e "COL1,COL2,COL3\nFoO,bAr,baZ" | sed '1s/.*/\L&/'
col1,col2,col3
FoO,bAr,baZ
Related
I have CSV columns that I'm working with:
info,example-string,super-example-string,otherinfo
I would like to get:
example-string super example string
Right now, I'm running the following command:
awk -F ',' '{print $3}' | sed "s/-//g"
But, then I have to paste the lines together to combine $2 and $3.
Is there anyway to do something like this?
awk -F ',' '{print $2" "$3}' | sed "s/-//g"
Except, where the sed command is only performed on $3 and $2 stays in place? I'm just concerned later on if the lines don't match up, the data could be misaligned.
Please note: I need to keep the pipe for the SED command. I just used a simple example but I end up running a lot of commands after that as well.
Try:
$ awk -F, '{gsub(/-/," ",$3); print $2,$3}' file
example-string super example string
How it works
-F,
This tells awk to use a comma as the field separator.
gsub(/-/," ",$3)
This replaces all - in field 3 with spaces.
print $2,$3
This prints fields 2 and 3.
Examples using pipelines
$ echo 'info,example-string,super-example-string,otherinfo' | awk -F, '{gsub(/-/," ",$3); print $2,$3}'
example-string super example string
In a pipeline with sed:
$ echo 'info,example-string,super-example-string,otherinfo' | awk -F, '{gsub(/-/," ",$3); print $2,$3}' | sed 's/string/String/g'
example-String super example String
Though best solution will be either use a single sed or use single awk. Since you have requested to use awk and sed solution so providing this. Also considering your actual data will be same as shown sample Input_file.
awk -F, '{print $2,$3}' Input_file | sed 's/\([^ ]*\)\([^-]*\)-\([^-]*\)-\([^-]*\)/\1 \2 \3 \4/'
Output will be as follows.
example-string super example string
I have a text file with layout as:
tableName1|counterVariable1
tableName2|counterVariable2
I want to replace the counterVariable1 with some other variable say counterVariableNew.
How can I accomplish this?
I have tried various SED/AWK approaches, closest one is mentioned below:
cat $fileName | grep -w $tableName | sed -i 's/$tableName\|counterVariable/$tableName\|counterVariableNew'
But all the 3 commands are not merging properly, please help!
Your script is an example of [ useless use of cat ]. But the key point here is to escape the pipe delimiter which has a special meaning(it stands for OR) when used with awk FS. So below script should do
# cat 42000479
tableName1|counterVariable1
tableName2|counterVariable2
tableName3|counterVariable2
# awk -F\| '$1=="tableName2"{$2="counterVariableNew"}1' 42000479
tableName1|counterVariable1
tableName2 counterVariableNew
tableName3|counterVariable2
An alternate way of doing the same stuff is below
# awk -v FS='|' '$1=="tableName2"{$2="counterVariableNew"}1' 42000479
Stuff inside the single quote will not be expanded.
awk -F'|' -v OFS='|' '/tableName1/ {$2="counterVariableNew"}1' file
tableName1|counterVariableNew
tableName2|counterVariable2
This will search for A (tableName1) and replace B (counterVariable1) to counterVariableNew.
Or by using sed :
sed -r '/tableName1/ s/(^.*\|)(.*)/\1counterVariableNew/g' file
tableName1|counterVariableNew
tableName2|counterVariable2
For word bounded search: Enclose the pattern inside \< and \> .
sed -r '/\<tableName1\>/ s/(^.*\|)(.*)/\1counterVariableNew/g' file
awk -F'|' -v OFS='|' '/\<tableName1\>/ {$2="counterVariableNew"}1' file
Suppose I have a file input.txt with few columns and few rows, the first column is the key, and a directory dir with files which contain some of these keys. I want to find all lines in the files in dir which contain these key words. At first I tried to run the command
cat input.txt | awk '{print $1}' | xargs grep dir
This doesn't work because it thinks the keys are paths on my file system. Next I tried something like
cat input.txt | awk '{system("grep -rn dir $1")}'
But this didn't work either, eventually I have to admit that even this doesn't work
cat input.txt | awk '{system("echo $1")}'
After I tried to use \ to escape the white space and the $ sign, I came here to ask for your advice, any ideas?
Of course I can do something like
for x in `cat input.txt` ; do grep -rn $x dir ; done
This is not good enough, because it takes two commands, but I want only one. This also shows why xargs doesn't work, the parameter is not the last argument
You don't need grep with awk, and you don't need cat to open files:
awk 'NR==FNR{keys[$1]; next} {for (key in keys) if ($0 ~ key) {print FILENAME, $0; next} }' input.txt dir/*
Nor do you need xargs, or shell loops or anything else - just one simple awk command does it all.
If input.txt is not a file, then tweak the above to:
real_input_generating_command |
awk 'NR==FNR{keys[$1]; next} {for (key in keys) if ($0 ~ key) {print FILENAME, $0; next} }' - dir/*
All it's doing is creating an array of keys from the first file (or input stream) and then looking for each key from that array in every file in the dir directory.
Try following
awk '{print $1}' input.txt | xargs -n 1 -I pattern grep -rn pattern dir
First thing you should do is research this.
Next ... you don't need to grep inside awk. That's completely redundant. It's like ... stuffing your turkey with .. a turkey.
Awk can process input and do "grep" like things itself, without the need to launch the grep command. But you don't even need to do this. Adapting your first example:
awk '{print $1}' input.txt | xargs -n 1 -I % grep % dir
This uses xargs' -I option to put xargs' input into a different place on the command line it runs. In FreeBSD or OSX, you would use a -J option instead.
But I prefer your for loop idea, converted into a while loop:
while read key junk; do grep -rn "$key" dir ; done < input.txt
Use process substitution to create a keyword "file" that you can pass to grep via the -f option:
grep -f <(awk '{print $1}' input.txt) dir/*
This will search each file in dir for lines containing keywords printed by the awk command. It's equivalent to
awk '{print $1}' input.txt > tmp.txt
grep -f tmp.txt dir/*
grep requires parameters in order: [what to search] [where to search]. You need to merge keys received from awk and pass them to grep using the \| regexp operator.
For example:
arturcz#szczaw:/tmp/s$ cat words.txt
foo
bar
fubar
foobaz
arturcz#szczaw:/tmp/s$ grep 'foo\|baz' words.txt
foo
foobaz
Finally, you will finish with:
grep `commands|to|prepare|a|keywords|list` directory
In case you still want to use grep inside awk, make sure $1, $2 etc are outside quote.
eg. this works perfectly
cat file_having_query | awk '{system("grep " $1 " file_to_be_greped")}'
// notice the space after grep and before file name
In Linux (Cento OS) I have a file that contains a set of additional information that I want to removed. I want to generate a new file with all characters until to the first |.
The file has the following information:
ALFA12345|7890
Beta0-XPTO-2|30452|90 385|29
ZETA2334423 435; 2|2|90dd5|dddd29|dqe3
The output expected will be:
ALFA12345
Beta0 XPTO-2
ZETA2334423 435; 2
That is removed all characters after the character | (inclusive).
Any suggestion for a script that reads File1 and generates File2 with this specific requirement?
Try
cut -d'|' -f1 oldfile > newfile
And, to round out the "big 3", here's the awk version:
awk -F\| '{print $1}' in.dat
You can use a simple sed script.
sed 's/^\([^|]*\).*/\1/g' in.dat
ALFA12345
Beta0-XPTO-2
ZETA2334423 435; 2
Redirect to a file to capture the output.
sed 's/^\([^|]*\).*/\1/g' in.dat > out.dat
And with grep:
$ grep -o '^[^|]*' file1
ALFA12345
Beta0-XPTO-2
ZETA2334423 435; 2
$ grep -o '^[^|]*' file1 > file2
I have a file with the following layout:
123,01-08-2006
124,01-09-2007
125,01-10-2009
126,01-12-2010
How can I convert it into the following by using AWK?
123,2006-08-01
124,2007-09-01
125,2009-10-01
126,2009-12-01
Didn't read the question properly the first time. You need a field separator that can be either a dash or a comma. Once you have that you can use the dash as an output field separator (as it's the most common) and fake the comma using concatenation:
awk -F',|-' 'OFS="-" {print $1 "," $4,$3,$2}' file
Pure awk
awk -F"," '{ n=split($2,b,"-");$2=b[3]"-"b[2]"-"b[1];$i=$1","$2 } 1' file
sed
sed -r 's/(^.[^,]*,)([0-9]{2})-([0-9]{2})-([0-9]{4})/\1\4-\3-\2/' file
sed 's/\(^.[^,]*,\)\([0-9][0-9]\)-\([0-9][0-9]\)-\([0-9]\+\)/\1\4-\3-\2/' file
Bash
#!/bin/bash
while IFS="," read -r a b
do
IFS="-"
set -- $b
echo "$a,$3-$2-$1"
done <"file"
Unfortunately, I think standard awk only allows one field separator character so you'll have to pre-process the data. You can do this with tr but if you really want an awk-only solution, use:
pax> echo '123,01-08-2006
124,01-09-2007
125,01-10-2009
126,01-12-2010' | awk -F, '{print $1"-"$2}' | awk -F- '{print $1","$4"-"$3"-"$2}'
This outputs:
123,2006-08-01
124,2007-09-01
125,2009-10-01
126,2010-12-01
as desired.
The first awk changes the , characters to - so that you have four fields separated with the same character (this is the bit I'd usually use tr ',' '-' for).
The second awk prints them out in the order you specified, correcting the field separators at the same time.
If you're using an awk implementation that allows multiple FS characters, you can use something like:
gawk -F ',|-' '{print $1","$4"-"$3"-"$2}'
If it doesn't need to be awk, you could use Perl too:
$ perl -nle 'print "$1,$4-$3-$2" while (/(\d{3}),(\d{2})-(\d{2})-(\d{4})\s*/g)' < file.txt