Spark Dataframe Pivot on Word in String - apache-spark

Basically I have a dataframe column (String type) that contains english sentences. My goal is to create a pivot table (grouped by user ids) that has words as columns and counts as entries. The problem is that if you do something like
myDataframe.groupBy(col("user")).pivot(col("sentences")).count()
Where "sentences" is the name of the column containing the english sentences, you will be counting the sentences rather than the individual words. Is there any way to count the individual words in the sentences and not just the sentences themselves? Whitespace tokenization is fine.

You have to tokenize and explode first:
import org.apache.spark.ml.feature.Tokenizer
new Tokenizer()
.setInputCol("sentences")
.setOutputCol("tokens")
.transform(df)
.withColumn("token", explode($"tokens"))
.groupBy(col("user")).pivot(col("token")).count()

Related

Making PANDAS identify a PATTERN inside a value on a DF

I'm using Python 3.9 with Pandas and Numpy.
Every day I receive a df with orders from the company I work for. Each day, this df comes from a different country that I don't know the language, and this dataframes don't have a pattern. In this case, I don't know what's the column name nor the index.
I just know that the orders follows a patter: 3 numbers + 2 letters like 000AA, 149KL, 555EE etc.
I saw that with strings is possible, but with pandas I just found commands that needs the name of the column.
df.column_name.str.contains(pat=r'\d\d\d\w\w', regex=True)
If I can find the column that only have this pattern, I know what the orders column is.
I started with a synthetic data set
import pandas
df = pandas.DataFrame([{'a':3,'b':4,'c':'222BB','d':'2asf'},
{'a':2,'b':1,'c':'111AA','d':'942'}])
I then cycle through each column. If the datatype is object, then I test whether all the elements in the Series match the regex
for column_id in df.columns:
if df[column_id].dtype=='object':
if all(df[column_id].str.contains(pat=r'\d\d\d\w\w', regex=True)):
print("matching column:",column_id)

How can I groupby rows by the columns in which they actually posses a data point?

I don't even know if groupby is the correct function to use for this. It's a bit hard to understand so Ill include a screenshot of my dataframe: screenshot
Basically, this dataframe has way too many columns because each column is specific to only one or a few rows. You can see in the screenshot that the first few columns are specific towards the first row and the last few columns are specific to the last row. I want to make it so that each row only has the columns that actually pertain to it. I've tried several methods of using groupby('equipment name') and several methods using dropna but none work in the way I need it to. I'm also open to separating it into multiple dataframes.
Any method is acceptable, this bug has been driving me crazy. It took me a while to get to this point because this started out as an unintelligible 10,000 line json. I'm pretty new to programming as well.
This is a very cool answer that could be one option - and it does use groupby so sorry for dismissing!!! This will group your data into DataFrames where each DataFrame has a unique group of columns, and any row which only contains values for those columns will be in that DataFrame. If your data are such that there are multiple groups of rows which share the exact same columns, this solution is ideal I think.
Just to note, though, if your null values are more randomly spread out throughout the dataset, or if one row in a group of rows is missing a single entry (compared to related rows), you will end up with more combinations of unique non-null columns, and then more output DataFrames.
There are also (in my opinion) nice ways to search a DataFrame, even if it is very sparse. You can check the non-null values for a row:
df.loc[index_name].dropna()
Or for an index number:
df.iloc[index_number].dropna()
You could further store these values, say in a dictionary (this is a dictionary of Series, but could be converted to DataFrame:
row_dict = {row : df.loc[row].dropna() for row in df.index}
I could imagine some scenarios where something based off these options is more helpful for searching. But that linked answer is slick, I would try that.
EDIT: Expanding on the answer above based on comments with OP.
The dictionary created in the linked post contain the DataFrames . Basically you can use this dictionary to do comparisons with the original source data. My only issue with that answer was that it may be hard to search the dictionary if the column names are janky (as it looks like in your data), so here's a slight modification:
for i, (name,df) in enumerate(df.groupby(df.isnull().dot(df.columns))):
d['df' + str(i)] = df.dropna(1)
Now the dictionary keys are "df#", and the values are the DataFrames. So if you wanted to inspect the content one DataFrame, you can call:
d['df1'].head()
#OR
print(d['df0'])
If you wanted to look at all the DataFrames, you could call
for df in d.values():
print(df.head()) #you can also pass an integer to head to show more rows than 5
Or if you wanted to save each DataFrame you could call:
for name in sorted(d.keys()):
d[name].to_csv('path/to/file/' + name + '.csv')
The point is, you've gotten to a data structure where you can look at the original data, separated into DataFrames without missing data. Joining these back into a single DataFrame would be redundant, as it would create a single DataFrame (equal to the original) or multiple with some amount of missing data.
I think it comes down to what you are looking for and how you need to search the data. You could rename the dictionary keys / output .CSV files based on the types of machinery inside, for example.
I thought your last comment might mean that objects of similar type might not share the same columns; say for example if not all "Exhaust Fans" have the same columns, they will end up in different DataFrames in the dictionary. This maybe the type of case where it might be easier to just look at individual rows, rather than grouping them into weird categories:
df_dict = {row : pd.DataFrame(df.loc[row].dropna()).transpose() for row in df.index}
You could again then save these DataFrames as CSV files or look at them one by one (or e.g. search for Exhaust Fans by seeing if "Exhaust" is in they key). You could also print them all at once:
import pandas as pd
import numpy as np
import natsort
#making some randomly sparse data
columns = ['Column ' + str(i+1) for i in range(10)]
index = ['Row ' + str(i+1) for i in range(100)]
df = pd.DataFrame(np.random.rand(100,10), columns=columns,index=index)
df[df<.7] = np.nan
#creating the dictionary where each key is a row name
df_dict = {row : pd.DataFrame(df.loc[row].dropna()).transpose() for row in df.index}
#printing all the output
for key in natsort.natsorted(df_dict.keys())[:5]: #using [:5] to limit output
print(df_dict[key], '\n')
Out[1]:
Column 1 Column 4 Column 7 Column 9 Column 10
Row 1 0.790282 0.710857 0.949141 0.82537 0.998411
Column 5 Column 8 Column 10
Row 2 0.941822 0.722561 0.796324
Column 2 Column 4 Column 5 Column 6
Row 3 0.8187 0.894869 0.997043 0.987833
Column 1 Column 7
Row 4 0.832628 0.8349
Column 1 Column 4 Column 6
Row 5 0.863212 0.811487 0.924363
Instead of printing, you could write the output to a text file; maybe that's the type of document that you could look at (and search) to compare to the input tables. Bute not that even though the printed data are tabular, they can't be made into a DataFrame without accepting that there will be missing data for rows which don't have entries for all columns.

Splitting DataFrame based on index

I have a DataFrame which I want to split into three DataFrames based on the string properties of the index. The index consists of IDs with the first two letters indicating the country, e.g.
DE1
UK4
US5
DE2
UK1
US3
I want three DataFrames with indexes being:
DE1
DE2
UK1
UK4
US3
US5
This seems promising:
df.groupby(df.index.str[:2]).groups
But I don't know how to use it to solve my problem...
Here is one way to do it
split = []
for value in df.index.str[:2].unique().values:
split.append(df[df.index.str[:2] == value])
We first compute the unique country code using the first 2 letters in the data frame. Then we loop over them and index into the data frame using all the unique country code. Here, I just added the resulting DataFrame to an array.

Get Spark dataset metadata

I am trying to convert the Dataset<row> into another object. Possibly be java.list. And I need to extract the metadata for this dataset. Like the number of column, column names and column types. Is there anyway to do it?
Thank you
You can get the schema from dataset as
ds.schema
This gives you StructType which contains all the information
ds.schema.fieldNames
This gives all the list of column names
ds.schema.fields
This gives you a list of StructField which contains column name, datatype and nullable as a boolean value.
ds.schema.size
This gives the total count of column names
Also, you can see the details with ds.printSchema()
Hope this helps!

matrix in row of rdd to dataframe

First off sorry for the winded explanation.
Hi There, I am trying to converts some data (in form of RDD) to a dataframe but it's a bit more complex that just that.
I have an RDD: where each item is ROW() with a matrix (list of lists) called features and a list called labels.
I want to convert this RDD to a Dataframe where each row is a single list of features and a scalar which is the label. As you can see the problem arises in that the features in the RDD consists of matrix's rather then vectors.
Thanks,
flatMap(lambda row: [(f,l) for f, l in zip(row.feature, row.label)])
solution was to flatMap the features and labels for each row. (On RDD's)

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